RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 GIMAP7Q8NHV1 300 aa14.42□□□□□ -0.1
COL12A1-202ENST00000345356 EVC2Q86UK5 1308 aa14.41□□□□□ -0.1
COL12A1-202ENST00000345356 LRRC9Q6ZRR7 1453 aa14.41□□□□□ -0.1
COL12A1-202ENST00000345356 MARCH6O60337 910 aa14.41□□□□□ -0.1
COL12A1-202ENST00000345356 AMPHP49418 695 aa14.41□□□□□ -0.1
COL12A1-202ENST00000345356 HDGFP51858 240 aaKnown RBP14.41□□□□□ -0.1
COL12A1-202ENST00000345356 CCDC47Q96A33 483 aaKnown RBP14.41□□□□□ -0.1
COL12A1-202ENST00000345356 RRAGDQ9NQL2 400 aaPredicted RBP14.41□□□□□ -0.1
COL12A1-202ENST00000345356 CNTROBQ8N137 903 aa14.4□□□□□ -0.1
COL12A1-202ENST00000345356 TNNT1P13805 278 aa14.4□□□□□ -0.1
COL12A1-202ENST00000345356 RSPH4AQ5TD94 716 aa14.4□□□□□ -0.1
COL12A1-202ENST00000345356 C16orf45Q96MC5 204 aaPredicted RBP14.4□□□□□ -0.1
COL12A1-202ENST00000345356 TSR2Q969E8 191 aaKnown RBP14.4□□□□□ -0.11
COL12A1-202ENST00000345356 HSP90AB4PQ58FF6 505 aa14.39□□□□□ -0.11
COL12A1-202ENST00000345356 KIF18AQ8NI77 898 aa14.39□□□□□ -0.11
COL12A1-202ENST00000345356 SMARCE1Q969G3 411 aa14.39□□□□□ -0.11
COL12A1-202ENST00000345356 NOL10Q9BSC4 688 aaKnown RBP14.39□□□□□ -0.11
COL12A1-202ENST00000345356 GTPBP4Q9BZE4 634 aaKnown RBP14.39□□□□□ -0.11
COL12A1-202ENST00000345356 CENPHQ9H3R5 247 aa14.39□□□□□ -0.11
COL12A1-202ENST00000345356 KIF2AO00139 706 aaPredicted RBP14.39□□□□□ -0.11
COL12A1-202ENST00000345356 EIF2S2P20042 333 aaKnown RBP14.38□□□□□ -0.11
COL12A1-202ENST00000345356 DNAJC2Q99543 621 aaKnown RBP14.38□□□□□ -0.11
COL12A1-202ENST00000345356 FAM193AP78312 1265 aa14.38□□□□□ -0.11
COL12A1-202ENST00000345356 G3BP1Q13283 466 aaKnown RBP eCLIP14.38□□□□□ -0.11
COL12A1-202ENST00000345356 LTV1Q96GA3 475 aaPredicted RBP14.38□□□□□ -0.11
COL12A1-202ENST00000345356 CCDC94Q9BW85 323 aaPredicted RBP14.38□□□□□ -0.11
COL12A1-202ENST00000345356 MYOM3Q5VTT5 1437 aa14.38□□□□□ -0.11
COL12A1-202ENST00000345356 MAP3K11Q16584 847 aa14.38□□□□□ -0.11
COL12A1-202ENST00000345356 LRRFIP1Q32MZ4 808 aaKnown RBP14.38□□□□□ -0.11
COL12A1-202ENST00000345356 CCDC183Q5T5S1 534 aa14.38□□□□□ -0.11
COL12A1-202ENST00000345356 EFCAB2Q5VUJ9 269 aa14.38□□□□□ -0.11
COL12A1-202ENST00000345356 ATF7IPQ6VMQ6 1270 aa14.38□□□□□ -0.11
COL12A1-202ENST00000345356 DHX37Q8IY37 1157 aaKnown RBP14.38□□□□□ -0.11
COL12A1-202ENST00000345356 ZNF396Q96N95 335 aaPredicted RBP14.38□□□□□ -0.11
COL12A1-202ENST00000345356 MTHFSP49914 203 aa14.37□□□□□ -0.11
COL12A1-202ENST00000345356 SLFN5Q08AF3 891 aa14.37□□□□□ -0.11
COL12A1-202ENST00000345356 TRDNQ13061 729 aa14.37□□□□□ -0.11
COL12A1-202ENST00000345356 BRPF1P55201 1214 aaPredicted RBP14.37□□□□□ -0.11
COL12A1-202ENST00000345356 SAFBQ15424 915 aaKnown RBP eCLIP14.37□□□□□ -0.11
COL12A1-202ENST00000345356 KLHL40Q2TBA0 621 aa14.37□□□□□ -0.11
COL12A1-202ENST00000345356 FILIP1LQ4L180 1135 aa14.37□□□□□ -0.11
COL12A1-202ENST00000345356 COG3Q96JB2 828 aa14.37□□□□□ -0.11
COL12A1-202ENST00000345356 LARP1BQ659C4 914 aaKnown RBP14.36□□□□□ -0.11
COL12A1-202ENST00000345356 SPATA32Q96LK8 384 aa14.36□□□□□ -0.11
COL12A1-202ENST00000345356 STK38Q15208 465 aa14.36□□□□□ -0.11
COL12A1-202ENST00000345356 NFXL1Q6ZNB6 911 aa14.36□□□□□ -0.11
COL12A1-202ENST00000345356 SMAP1Q8IYB5 467 aaPredicted RBP14.36□□□□□ -0.11
COL12A1-202ENST00000345356 TDRD9Q8NDG6 1382 aaKnown RBP14.36□□□□□ -0.11
COL12A1-202ENST00000345356 OFD1O75665 1012 aa14.36□□□□□ -0.11
COL12A1-202ENST00000345356 HMOX1P09601 288 aa14.36□□□□□ -0.11
COL12A1-202ENST00000345356 CEP57L1Q8IYX8 460 aa14.36□□□□□ -0.11
COL12A1-202ENST00000345356 IPO4Q8TEX9 1081 aaKnown RBP14.36□□□□□ -0.11
COL12A1-202ENST00000345356 LRRCC1Q9C099 1032 aa14.36□□□□□ -0.11
COL12A1-202ENST00000345356 ADCY5O95622 1261 aa14.36□□□□□ -0.11
COL12A1-202ENST00000345356 CAMK4Q16566 473 aa14.35□□□□□ -0.11
COL12A1-202ENST00000345356 TBC1D32Q96NH3 1257 aa14.35□□□□□ -0.11
COL12A1-202ENST00000345356 BAG4O95429 457 aaKnown RBP14.35□□□□□ -0.11
COL12A1-202ENST00000345356 CYP46A1Q9Y6A2 500 aa14.35□□□□□ -0.11
COL12A1-202ENST00000345356 ME1P48163 572 aa14.35□□□□□ -0.11
COL12A1-202ENST00000345356 ZSCAN23Q3MJ62 389 aa14.35□□□□□ -0.11
COL12A1-202ENST00000345356 KRT222Q8N1A0 295 aa14.35□□□□□ -0.11
COL12A1-202ENST00000345356 IRX3P78415 501 aaPredicted RBP14.35□□□□□ -0.11
COL12A1-202ENST00000345356 RBM27Q9P2N5 1060 aaKnown RBP14.35□□□□□ -0.11
COL12A1-202ENST00000345356 UBTFL1P0CB47 393 aaPredicted RBP14.34□□□□□ -0.11
COL12A1-202ENST00000345356 CARMIL2Q6F5E8 1435 aa14.34□□□□□ -0.11
COL12A1-202ENST00000345356 GOLGA6L10A6NI86 522 aa14.34□□□□□ -0.11
COL12A1-202ENST00000345356 UPF3BQ9BZI7 483 aaKnown RBP14.34□□□□□ -0.11
COL12A1-202ENST00000345356 PPFIBP1Q86W92 1011 aa14.34□□□□□ -0.11
COL12A1-202ENST00000345356 CBFA2T2O43439 604 aa14.34□□□□□ -0.11
COL12A1-202ENST00000345356 IBSPP21815 317 aaPredicted RBP14.34□□□□□ -0.11
COL12A1-202ENST00000345356 GTF2A1P52655 376 aaPredicted RBP14.34□□□□□ -0.11
COL12A1-202ENST00000345356 ZKSCAN5Q9Y2L8 839 aa14.33□□□□□ -0.12
COL12A1-202ENST00000345356 WDR63Q8IWG1 891 aa14.33□□□□□ -0.12
COL12A1-202ENST00000345356 FSD1Q9BTV5 496 aa14.33□□□□□ -0.12
COL12A1-202ENST00000345356 URI1O94763 535 aaPredicted RBP14.33□□□□□ -0.12
COL12A1-202ENST00000345356 STK3Q13188 491 aa14.33□□□□□ -0.12
COL12A1-202ENST00000345356 CLIP2Q9UDT6 1046 aa14.33□□□□□ -0.12
COL12A1-202ENST00000345356 SURF6O75683 361 aaKnown RBP14.33□□□□□ -0.12
COL12A1-202ENST00000345356 PLCD3Q8N3E9 789 aa14.33□□□□□ -0.12
COL12A1-202ENST00000345356 NEXNQ0ZGT2 675 aa14.32□□□□□ -0.12
COL12A1-202ENST00000345356 BMS1Q14692 1282 aaKnown RBP14.32□□□□□ -0.12
COL12A1-202ENST00000345356 NOLC1Q14978 699 aaKnown RBP eCLIP14.32□□□□□ -0.12
COL12A1-202ENST00000345356 TSPYL4Q9UJ04 414 aa14.32□□□□□ -0.12
COL12A1-202ENST00000345356 GOLGA6L7A0A1B0GV03 622 aa14.32□□□□□ -0.12
COL12A1-202ENST00000345356 RALYLQ86SE5 291 aaKnown RBP14.32□□□□□ -0.12
COL12A1-202ENST00000345356 IGSF3O75054 1194 aa14.32□□□□□ -0.12
COL12A1-202ENST00000345356 SFPQP23246 707 aaKnown RBP eCLIP14.32□□□□□ -0.12
COL12A1-202ENST00000345356 TRMT1Q9NXH9 659 aaKnown RBP14.32□□□□□ -0.12
COL12A1-202ENST00000345356 SHTN1A0MZ66 631 aa14.32□□□□□ -0.12
COL12A1-202ENST00000345356 ZNF830Q96NB3 372 aaPredicted RBP14.32□□□□□ -0.12
COL12A1-202ENST00000345356 CSB-PGBD3P0DP91 1061 aa14.31□□□□□ -0.12
COL12A1-202ENST00000345356 VPS53Q5VIR6 699 aa14.31□□□□□ -0.12
COL12A1-202ENST00000345356 CUX1P39880 1505 aa14.31□□□□□ -0.12
COL12A1-202ENST00000345356 GNAI3P08754 354 aa14.31□□□□□ -0.12
COL12A1-202ENST00000345356 MLECQ14165 292 aa14.31□□□□□ -0.12
COL12A1-202ENST00000345356 GBP3Q9H0R5 595 aa14.31□□□□□ -0.12
COL12A1-202ENST00000345356 MINK1Q8N4C8 1332 aaPredicted RBP14.31□□□□□ -0.12
COL12A1-202ENST00000345356 GGNBP2Q9H3C7 697 aa14.31□□□□□ -0.12
COL12A1-202ENST00000345356 TWISTNBQ3B726 338 aaPredicted RBP14.3□□□□□ -0.12
COL12A1-202ENST00000345356 CLASRPQ8N2M8 674 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms