RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 PXDNQ92626 1479 aa10.07□□□□□ -0.8
GDNF-202ENST00000344622 KTN1Q86UP2 1357 aaKnown RBP10.07□□□□□ -0.8
GDNF-202ENST00000344622 BRINP3Q76B58 766 aa10.06□□□□□ -0.8
GDNF-202ENST00000344622 LTN1O94822 1766 aa10.06□□□□□ -0.8
GDNF-202ENST00000344622 NHSL1Q5SYE7 1610 aa10.06□□□□□ -0.8
GDNF-202ENST00000344622 PUS7Q96PZ0 661 aaKnown RBP10.05□□□□□ -0.8
GDNF-202ENST00000344622 USP54Q70EL1 1684 aa10.05□□□□□ -0.8
GDNF-202ENST00000344622 OVOS2A0A0J9YW53 1432 aa10.05□□□□□ -0.8
GDNF-202ENST00000344622 OVOS2Q6IE36 1432 aa10.05□□□□□ -0.8
GDNF-202ENST00000344622 PLEKHG5O94827 1062 aa10.05□□□□□ -0.8
GDNF-202ENST00000344622 ANKARQ7Z5J8 1434 aa10.05□□□□□ -0.8
GDNF-202ENST00000344622 ABCA3Q99758 1704 aa10.04□□□□□ -0.8
GDNF-202ENST00000344622 C14orf37Q86TY3 774 aa10.04□□□□□ -0.8
GDNF-202ENST00000344622 TTC21BQ7Z4L5 1316 aa10.04□□□□□ -0.8
GDNF-202ENST00000344622 COL3A1P02461 1466 aaPredicted RBP10.03□□□□□ -0.8
GDNF-202ENST00000344622 PPP2R1AP30153 589 aa10.03□□□□□ -0.8
GDNF-202ENST00000344622 RRS1Q15050 365 aaKnown RBP10.03□□□□□ -0.8
GDNF-202ENST00000344622 SLAIN2Q9P270 581 aa10.03□□□□□ -0.8
GDNF-202ENST00000344622 EDC4Q6P2E9 1401 aaKnown RBP10.03□□□□□ -0.8
GDNF-202ENST00000344622 AEBP2Q6ZN18 517 aaPredicted RBP10.03□□□□□ -0.8
GDNF-202ENST00000344622 PHF8Q9UPP1 1060 aa10.03□□□□□ -0.8
GDNF-202ENST00000344622 DCCP43146 1447 aa10.02□□□□□ -0.8
GDNF-202ENST00000344622 PELP1Q8IZL8 1130 aaKnown RBP10.02□□□□□ -0.8
GDNF-202ENST00000344622 CABLES1Q8TDN4 633 aa10.02□□□□□ -0.8
GDNF-202ENST00000344622 EMILIN1Q9Y6C2 1016 aa10.02□□□□□ -0.8
GDNF-202ENST00000344622 PHRF1Q9P1Y6 1649 aaKnown RBP10.02□□□□□ -0.81
GDNF-202ENST00000344622 NFAT5O94916 1531 aa10.02□□□□□ -0.81
GDNF-202ENST00000344622 SOX12O15370 315 aa10.02□□□□□ -0.81
GDNF-202ENST00000344622 KNSTRNQ9Y448 316 aa10.02□□□□□ -0.81
GDNF-202ENST00000344622 KIF1AQ12756 1690 aa10.01□□□□□ -0.81
GDNF-202ENST00000344622 CDCA8Q53HL2 280 aa10.01□□□□□ -0.81
GDNF-202ENST00000344622 NCOA3Q9Y6Q9 1424 aa10□□□□□ -0.81
GDNF-202ENST00000344622 MSH6P52701 1360 aa10□□□□□ -0.81
GDNF-202ENST00000344622 ANP32CO43423 234 aa10□□□□□ -0.81
GDNF-202ENST00000344622 NPC1L1Q9UHC9 1359 aa10□□□□□ -0.81
GDNF-202ENST00000344622 COL16A1Q07092 1604 aaPredicted RBP10□□□□□ -0.81
GDNF-202ENST00000344622 COL18A1P39060 1754 aa10□□□□□ -0.81
GDNF-202ENST00000344622 NINLQ9Y2I6 1382 aa10□□□□□ -0.81
GDNF-202ENST00000344622 POLKQ9UBT6 870 aa10□□□□□ -0.81
GDNF-202ENST00000344622 PNISRQ8TF01 805 aaKnown RBP9.99□□□□□ -0.81
GDNF-202ENST00000344622 NGDNQ8NEJ9 315 aaKnown RBP9.99□□□□□ -0.81
GDNF-202ENST00000344622 RGPD1P0DJD0 1748 aa9.99□□□□□ -0.81
GDNF-202ENST00000344622 AXIN2Q9Y2T1 843 aa9.98□□□□□ -0.81
GDNF-202ENST00000344622 MTHFSP49914 203 aa9.98□□□□□ -0.81
GDNF-202ENST00000344622 ATF3P18847 181 aa9.98□□□□□ -0.81
GDNF-202ENST00000344622 CGNL1Q0VF96 1302 aa9.98□□□□□ -0.81
GDNF-202ENST00000344622 MYBBP1AQ9BQG0 1328 aaKnown RBP9.98□□□□□ -0.81
GDNF-202ENST00000344622 PAK3O75914 559 aaPredicted RBP9.97□□□□□ -0.81
GDNF-202ENST00000344622 TERF2IPQ9NYB0 399 aa9.97□□□□□ -0.81
GDNF-202ENST00000344622 DMRT2Q9Y5R5 561 aa9.97□□□□□ -0.81
GDNF-202ENST00000344622 USP31Q70CQ4 1352 aa9.97□□□□□ -0.81
GDNF-202ENST00000344622 KRT28Q7Z3Y7 464 aa9.96□□□□□ -0.81
GDNF-202ENST00000344622 CADPS2Q86UW7 1296 aa9.96□□□□□ -0.81
GDNF-202ENST00000344622 PHLPP1O60346 1717 aa9.96□□□□□ -0.81
GDNF-202ENST00000344622 SLIT3O75094 1523 aa9.96□□□□□ -0.81
GDNF-202ENST00000344622 FAM9BQ8IZU0 186 aa9.96□□□□□ -0.81
GDNF-202ENST00000344622 SOS2Q07890 1332 aaPredicted RBP9.96□□□□□ -0.82
GDNF-202ENST00000344622 PIP4K2BP78356 416 aa9.96□□□□□ -0.82
GDNF-202ENST00000344622 HSP90AB2PQ58FF8 381 aa9.96□□□□□ -0.82
GDNF-202ENST00000344622 HDGFL2Q7Z4V5 671 aaPredicted RBP9.96□□□□□ -0.82
GDNF-202ENST00000344622 ABTB2Q8N961 1025 aa9.96□□□□□ -0.82
GDNF-202ENST00000344622 MRS2Q9HD23 443 aa9.95□□□□□ -0.82
GDNF-202ENST00000344622 ADAMTS8Q9UP79 889 aa9.95□□□□□ -0.82
GDNF-202ENST00000344622 PNPLA6Q8IY17 1366 aa9.95□□□□□ -0.82
GDNF-202ENST00000344622 DLG5Q8TDM6 1919 aa9.95□□□□□ -0.82
GDNF-202ENST00000344622 SMG6Q86US8 1419 aaKnown RBP9.95□□□□□ -0.82
GDNF-202ENST00000344622 MAP3K19Q56UN5 1328 aa9.95□□□□□ -0.82
GDNF-202ENST00000344622 PSME1Q06323 249 aa9.95□□□□□ -0.82
GDNF-202ENST00000344622 MORC1Q86VD1 984 aa9.94□□□□□ -0.82
GDNF-202ENST00000344622 AHDC1Q5TGY3 1603 aaPredicted RBP9.94□□□□□ -0.82
GDNF-202ENST00000344622 NLRP6P59044 892 aa9.94□□□□□ -0.82
GDNF-202ENST00000344622 ZNF692Q9BU19 519 aaPredicted RBP9.94□□□□□ -0.82
GDNF-202ENST00000344622 SPATA31A3Q5VYP0 1347 aa9.94□□□□□ -0.82
GDNF-202ENST00000344622 RALBP1Q15311 655 aa9.93□□□□□ -0.82
GDNF-202ENST00000344622 CCER2I3L3R5 266 aa9.93□□□□□ -0.82
GDNF-202ENST00000344622 LMO7Q8WWI1 1683 aa9.92□□□□□ -0.82
GDNF-202ENST00000344622 PPM1GO15355 546 aaPredicted RBP9.92□□□□□ -0.82
GDNF-202ENST00000344622 TNS3Q68CZ2 1445 aa9.92□□□□□ -0.82
GDNF-202ENST00000344622 NLRP13Q86W25 1043 aa9.92□□□□□ -0.82
GDNF-202ENST00000344622 AEBP1Q8IUX7 1158 aa9.92□□□□□ -0.82
GDNF-202ENST00000344622 CCDC146Q8IYE0 955 aa9.92□□□□□ -0.82
GDNF-202ENST00000344622 USP19O94966 1318 aa9.92□□□□□ -0.82
GDNF-202ENST00000344622 SCAF1Q9H7N4 1312 aaKnown RBP9.92□□□□□ -0.82
GDNF-202ENST00000344622 CERKQ8TCT0 537 aa9.92□□□□□ -0.82
GDNF-202ENST00000344622 BRD4O60885 1362 aaPredicted RBP9.92□□□□□ -0.82
GDNF-202ENST00000344622 VIRMAQ69YN4 1812 aaKnown RBP9.91□□□□□ -0.82
GDNF-202ENST00000344622 LMOD2Q6P5Q4 547 aa9.91□□□□□ -0.82
GDNF-202ENST00000344622 GCP02774 474 aa9.91□□□□□ -0.82
GDNF-202ENST00000344622 FAM208AQ9UK61 1670 aaKnown RBP9.91□□□□□ -0.82
GDNF-202ENST00000344622 CAMTA1Q9Y6Y1 1673 aa9.91□□□□□ -0.82
GDNF-202ENST00000344622 COL22A1Q8NFW1 1626 aaPredicted RBP9.91□□□□□ -0.82
GDNF-202ENST00000344622 ZC3H6P61129 1189 aaKnown RBP9.91□□□□□ -0.82
GDNF-202ENST00000344622 CHRNA2Q15822 529 aa9.91□□□□□ -0.82
GDNF-202ENST00000344622 NSD2O96028 1365 aa9.9□□□□□ -0.82
GDNF-202ENST00000344622 IL13P35225 146 aa9.9□□□□□ -0.82
GDNF-202ENST00000344622 LRP6O75581 1613 aa9.9□□□□□ -0.82
GDNF-202ENST00000344622 AATKQ6ZMQ8 1374 aa9.9□□□□□ -0.83
GDNF-202ENST00000344622 COG3Q96JB2 828 aa9.89□□□□□ -0.83
GDNF-202ENST00000344622 SPINK5Q9NQ38 1064 aaPredicted RBP9.89□□□□□ -0.83
GDNF-202ENST00000344622 TTC21AQ8NDW8 1320 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms