RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 ACEP12821 1306 aa28.59■■■□□ 2.17
CEACAM3-201ENST00000344550 EVC2Q86UK5 1308 aa28.59■■■□□ 2.17
CEACAM3-201ENST00000344550 ABCA3Q99758 1704 aa28.57■■■□□ 2.16
CEACAM3-201ENST00000344550 PAK3O75914 559 aaPredicted RBP28.57■■■□□ 2.16
CEACAM3-201ENST00000344550 UPF1Q92900 1129 aaKnown RBP eCLIP28.56■■■□□ 2.16
CEACAM3-201ENST00000344550 NWD2Q9ULI1 1742 aa28.56■■■□□ 2.16
CEACAM3-201ENST00000344550 PPIP5K1Q6PFW1 1433 aa28.54■■■□□ 2.16
CEACAM3-201ENST00000344550 SBNO2Q9Y2G9 1366 aa28.54■■■□□ 2.16
CEACAM3-201ENST00000344550 VPS72Q15906 364 aa28.53■■■□□ 2.16
CEACAM3-201ENST00000344550 CABP2Q9NPB3 220 aa28.53■■■□□ 2.16
CEACAM3-201ENST00000344550 FAM83GA6ND36 823 aa28.52■■■□□ 2.16
CEACAM3-201ENST00000344550 RALGAPBQ86X10 1494 aa28.52■■■□□ 2.16
CEACAM3-201ENST00000344550 CARD11Q9BXL7 1154 aa28.5■■■□□ 2.15
CEACAM3-201ENST00000344550 ATAD2Q6PL18 1390 aa28.5■■■□□ 2.15
CEACAM3-201ENST00000344550 CABP1Q9NZU7 370 aa28.47■■■□□ 2.15
CEACAM3-201ENST00000344550 COL14A1Q05707 1796 aaKnown RBP28.47■■■□□ 2.15
CEACAM3-201ENST00000344550 CRYBG1Q9Y4K1 1723 aa28.46■■■□□ 2.15
CEACAM3-201ENST00000344550 PLCH1Q4KWH8 1693 aa28.46■■■□□ 2.15
CEACAM3-201ENST00000344550 ONECUT3O60422 494 aaPredicted RBP28.46■■■□□ 2.15
CEACAM3-201ENST00000344550 ZNF692Q9BU19 519 aaPredicted RBP28.46■■■□□ 2.15
CEACAM3-201ENST00000344550 CLSPNQ9HAW4 1339 aa28.45■■■□□ 2.15
CEACAM3-201ENST00000344550 SLC24A1O60721 1099 aa28.45■■■□□ 2.14
CEACAM3-201ENST00000344550 ABTB2Q8N961 1025 aa28.45■■■□□ 2.14
CEACAM3-201ENST00000344550 PLEKHG5O94827 1062 aa28.44■■■□□ 2.14
CEACAM3-201ENST00000344550 NLRP13Q86W25 1043 aa28.44■■■□□ 2.14
CEACAM3-201ENST00000344550 PRDM11Q9NQV5 511 aa28.43■■■□□ 2.14
CEACAM3-201ENST00000344550 BTG4Q9NY30 223 aa28.43■■■□□ 2.14
CEACAM3-201ENST00000344550 TIMELESSQ9UNS1 1208 aa28.43■■■□□ 2.14
CEACAM3-201ENST00000344550 USP6P35125 1406 aa28.43■■■□□ 2.14
CEACAM3-201ENST00000344550 GLI3P10071 1580 aa28.42■■■□□ 2.14
CEACAM3-201ENST00000344550 USP19O94966 1318 aa28.42■■■□□ 2.14
CEACAM3-201ENST00000344550 PUS7Q96PZ0 661 aaKnown RBP28.41■■■□□ 2.14
CEACAM3-201ENST00000344550 CCDC125Q86Z20 511 aa28.4■■■□□ 2.14
CEACAM3-201ENST00000344550 CPDO75976 1380 aa28.38■■■□□ 2.13
CEACAM3-201ENST00000344550 SSH2Q76I76 1423 aa28.38■■■□□ 2.13
CEACAM3-201ENST00000344550 KIAA0232Q92628 1395 aa28.37■■■□□ 2.13
CEACAM3-201ENST00000344550 PHRF1Q9P1Y6 1649 aaKnown RBP28.37■■■□□ 2.13
CEACAM3-201ENST00000344550 CCDC9Q9Y3X0 531 aaKnown RBP28.37■■■□□ 2.13
CEACAM3-201ENST00000344550 NRAPQ86VF7 1730 aa28.37■■■□□ 2.13
CEACAM3-201ENST00000344550 NUTM2GQ5VZR2 741 aa28.34■■■□□ 2.13
CEACAM3-201ENST00000344550 SEPT12Q8IYM1 358 aa28.34■■■□□ 2.13
CEACAM3-201ENST00000344550 CPSF1Q10570 1443 aaKnown RBP28.34■■■□□ 2.13
CEACAM3-201ENST00000344550 GCP02774 474 aa28.33■■■□□ 2.13
CEACAM3-201ENST00000344550 SPATA31A5Q5VU36 1347 aa28.33■■■□□ 2.13
CEACAM3-201ENST00000344550 SPATA31A7Q8IWB4 1347 aa28.33■■■□□ 2.13
CEACAM3-201ENST00000344550 TTC21AQ8NDW8 1320 aa28.33■■■□□ 2.13
CEACAM3-201ENST00000344550 ZC3H6P61129 1189 aaKnown RBP28.32■■■□□ 2.12
CEACAM3-201ENST00000344550 NLRP6P59044 892 aa28.31■■■□□ 2.12
CEACAM3-201ENST00000344550 NRKQ7Z2Y5 1582 aa28.3■■■□□ 2.12
CEACAM3-201ENST00000344550 TTC21BQ7Z4L5 1316 aa28.28■■■□□ 2.12
CEACAM3-201ENST00000344550 AKAP12Q02952 1782 aa28.27■■■□□ 2.12
CEACAM3-201ENST00000344550 KTN1Q86UP2 1357 aaKnown RBP28.26■■■□□ 2.12
CEACAM3-201ENST00000344550 CHRNA2Q15822 529 aa28.26■■■□□ 2.11
CEACAM3-201ENST00000344550 SLIT3O75094 1523 aa28.26■■■□□ 2.11
CEACAM3-201ENST00000344550 NINLQ9Y2I6 1382 aa28.25■■■□□ 2.11
CEACAM3-201ENST00000344550 KRT27Q7Z3Y8 459 aa28.25■■■□□ 2.11
CEACAM3-201ENST00000344550 KCNH5Q8NCM2 988 aa28.25■■■□□ 2.11
CEACAM3-201ENST00000344550 TESK2Q96S53 571 aa28.25■■■□□ 2.11
CEACAM3-201ENST00000344550 SPATA31A1Q5TZJ5 1347 aa28.24■■■□□ 2.11
CEACAM3-201ENST00000344550 EVA1CP58658 441 aa28.24■■■□□ 2.11
CEACAM3-201ENST00000344550 FAM98CQ17RN3 349 aaKnown RBP28.24■■■□□ 2.11
CEACAM3-201ENST00000344550 EP400Q96L91 3159 aa28.24■■■□□ 2.11
CEACAM3-201ENST00000344550 ST20-MTHFSA0A0A6YYL1 179 aa28.23■■■□□ 2.11
CEACAM3-201ENST00000344550 AATKQ6ZMQ8 1374 aa28.23■■■□□ 2.11
CEACAM3-201ENST00000344550 HDGFL2Q7Z4V5 671 aaPredicted RBP28.22■■■□□ 2.11
CEACAM3-201ENST00000344550 TERF2IPQ9NYB0 399 aa28.22■■■□□ 2.11
CEACAM3-201ENST00000344550 PIK3C2AO00443 1686 aa28.22■■■□□ 2.11
CEACAM3-201ENST00000344550 LMO7Q8WWI1 1683 aa28.22■■■□□ 2.11
CEACAM3-201ENST00000344550 BLMP54132 1417 aaPredicted RBP28.21■■■□□ 2.11
CEACAM3-201ENST00000344550 BRWD3Q6RI45 1802 aa28.2■■■□□ 2.11
CEACAM3-201ENST00000344550 CAMTA1Q9Y6Y1 1673 aa28.2■■■□□ 2.11
CEACAM3-201ENST00000344550 BARGINQ6ZT62 677 aa28.2■■■□□ 2.1
CEACAM3-201ENST00000344550 PCGF6Q9BYE7 350 aa28.2■■■□□ 2.1
CEACAM3-201ENST00000344550 STRN4Q9NRL3 753 aa28.19■■■□□ 2.1
CEACAM3-201ENST00000344550 THRAP3Q9Y2W1 955 aaKnown RBP28.19■■■□□ 2.1
CEACAM3-201ENST00000344550 MON2Q7Z3U7 1717 aa28.18■■■□□ 2.1
CEACAM3-201ENST00000344550 A0A0G2JS52 829 aa28.18■■■□□ 2.1
CEACAM3-201ENST00000344550 MYT1Q01538 1121 aa28.18■■■□□ 2.1
CEACAM3-201ENST00000344550 TMC1Q8TDI8 760 aa28.18■■■□□ 2.1
CEACAM3-201ENST00000344550 USP31Q70CQ4 1352 aa28.18■■■□□ 2.1
CEACAM3-201ENST00000344550 CD163L1Q9NR16 1453 aa28.17■■■□□ 2.1
CEACAM3-201ENST00000344550 THSD7AQ9UPZ6 1657 aa28.16■■■□□ 2.1
CEACAM3-201ENST00000344550 SLC12A5Q9H2X9 1139 aa28.16■■■□□ 2.1
CEACAM3-201ENST00000344550 EDC4Q6P2E9 1401 aaKnown RBP28.16■■■□□ 2.1
CEACAM3-201ENST00000344550 USP47Q96K76 1375 aa28.15■■■□□ 2.1
CEACAM3-201ENST00000344550 COL5A2P05997 1499 aaPredicted RBP28.15■■■□□ 2.1
CEACAM3-201ENST00000344550 ARHGEF25Q86VW2 580 aa28.14■■■□□ 2.1
CEACAM3-201ENST00000344550 TCP11L2Q8N4U5 519 aa28.14■■■□□ 2.1
CEACAM3-201ENST00000344550 TMF1P82094 1093 aa28.13■■■□□ 2.09
CEACAM3-201ENST00000344550 SF3B2Q13435 895 aaKnown RBP28.13■■■□□ 2.09
CEACAM3-201ENST00000344550 CDCA8Q53HL2 280 aa28.13■■■□□ 2.09
CEACAM3-201ENST00000344550 LARP1Q6PKG0 1096 aaKnown RBP28.12■■■□□ 2.09
CEACAM3-201ENST00000344550 USP54Q70EL1 1684 aa28.11■■■□□ 2.09
CEACAM3-201ENST00000344550 ABCC6O95255 1503 aa28.11■■■□□ 2.09
CEACAM3-201ENST00000344550 CRB1P82279 1406 aa28.1■■■□□ 2.09
CEACAM3-201ENST00000344550 A0A1W2PP64 1363 aa28.09■■■□□ 2.09
CEACAM3-201ENST00000344550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.08■■■□□ 2.09
CEACAM3-201ENST00000344550 C11orf95C9JLR9 678 aaPredicted RBP28.07■■■□□ 2.08
CEACAM3-201ENST00000344550 NFAT5O94916 1531 aa28.07■■■□□ 2.08
CEACAM3-201ENST00000344550 COL18A1P39060 1754 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms