RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 ALS2Q96Q42 1657 aa22.84■■□□□ 1.25
ATG4B-201ENST00000344376 ATRNO75882 1429 aa22.83■■□□□ 1.25
ATG4B-201ENST00000344376 BCL9LQ86UU0 1499 aa22.83■■□□□ 1.24
ATG4B-201ENST00000344376 ABCA3Q99758 1704 aa22.81■■□□□ 1.24
ATG4B-201ENST00000344376 SLIT2O94813 1529 aa22.81■■□□□ 1.24
ATG4B-201ENST00000344376 UNC5CLQ8IV45 518 aa22.8■■□□□ 1.24
ATG4B-201ENST00000344376 RGS12O14924 1447 aa22.79■■□□□ 1.24
ATG4B-201ENST00000344376 CLSPNQ9HAW4 1339 aa22.79■■□□□ 1.24
ATG4B-201ENST00000344376 SBNO2Q9Y2G9 1366 aa22.78■■□□□ 1.24
ATG4B-201ENST00000344376 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.77■■□□□ 1.24
ATG4B-201ENST00000344376 CABP1Q9NZU7 370 aa22.77■■□□□ 1.24
ATG4B-201ENST00000344376 BRD4O60885 1362 aaPredicted RBP22.77■■□□□ 1.24
ATG4B-201ENST00000344376 ATAD2Q6PL18 1390 aa22.76■■□□□ 1.23
ATG4B-201ENST00000344376 GJD4Q96KN9 370 aaPredicted RBP22.75■■□□□ 1.23
ATG4B-201ENST00000344376 ABTB2Q8N961 1025 aa22.74■■□□□ 1.23
ATG4B-201ENST00000344376 FAM83GA6ND36 823 aa22.73■■□□□ 1.23
ATG4B-201ENST00000344376 PLCH1Q4KWH8 1693 aa22.73■■□□□ 1.23
ATG4B-201ENST00000344376 NWD2Q9ULI1 1742 aa22.73■■□□□ 1.23
ATG4B-201ENST00000344376 NUTM2GQ5VZR2 741 aa22.72■■□□□ 1.23
ATG4B-201ENST00000344376 PRDM11Q9NQV5 511 aa22.72■■□□□ 1.23
ATG4B-201ENST00000344376 TIMELESSQ9UNS1 1208 aa22.72■■□□□ 1.23
ATG4B-201ENST00000344376 USP6P35125 1406 aa22.71■■□□□ 1.23
ATG4B-201ENST00000344376 COL14A1Q05707 1796 aaKnown RBP22.71■■□□□ 1.23
ATG4B-201ENST00000344376 VPS72Q15906 364 aa22.71■■□□□ 1.23
ATG4B-201ENST00000344376 CRYBG1Q9Y4K1 1723 aa22.71■■□□□ 1.23
ATG4B-201ENST00000344376 CCDC9Q9Y3X0 531 aaKnown RBP22.7■■□□□ 1.22
ATG4B-201ENST00000344376 NLRP13Q86W25 1043 aa22.69■■□□□ 1.22
ATG4B-201ENST00000344376 ZNF692Q9BU19 519 aaPredicted RBP22.69■■□□□ 1.22
ATG4B-201ENST00000344376 BTG4Q9NY30 223 aa22.69■■□□□ 1.22
ATG4B-201ENST00000344376 PHRF1Q9P1Y6 1649 aaKnown RBP22.68■■□□□ 1.22
ATG4B-201ENST00000344376 KIAA0232Q92628 1395 aa22.67■■□□□ 1.22
ATG4B-201ENST00000344376 SLC24A1O60721 1099 aa22.67■■□□□ 1.22
ATG4B-201ENST00000344376 UPF1Q92900 1129 aaKnown RBP eCLIP22.67■■□□□ 1.22
ATG4B-201ENST00000344376 USP19O94966 1318 aa22.66■■□□□ 1.22
ATG4B-201ENST00000344376 GLI3P10071 1580 aa22.65■■□□□ 1.22
ATG4B-201ENST00000344376 ZC3H6P61129 1189 aaKnown RBP22.65■■□□□ 1.22
ATG4B-201ENST00000344376 CCER1Q8TC90 406 aaPredicted RBP22.65■■□□□ 1.22
ATG4B-201ENST00000344376 NRKQ7Z2Y5 1582 aa22.64■■□□□ 1.21
ATG4B-201ENST00000344376 ST20-MTHFSA0A0A6YYL1 179 aa22.63■■□□□ 1.21
ATG4B-201ENST00000344376 NRAPQ86VF7 1730 aa22.63■■□□□ 1.21
ATG4B-201ENST00000344376 SSH2Q76I76 1423 aa22.63■■□□□ 1.21
ATG4B-201ENST00000344376 NLRP6P59044 892 aa22.63■■□□□ 1.21
ATG4B-201ENST00000344376 CPSF1Q10570 1443 aaKnown RBP22.62■■□□□ 1.21
ATG4B-201ENST00000344376 CHRNA2Q15822 529 aa22.62■■□□□ 1.21
ATG4B-201ENST00000344376 TMC1Q8TDI8 760 aa22.62■■□□□ 1.21
ATG4B-201ENST00000344376 PUS7Q96PZ0 661 aaKnown RBP22.62■■□□□ 1.21
ATG4B-201ENST00000344376 KTN1Q86UP2 1357 aaKnown RBP22.62■■□□□ 1.21
ATG4B-201ENST00000344376 TTC21AQ8NDW8 1320 aa22.61■■□□□ 1.21
ATG4B-201ENST00000344376 GCP02774 474 aa22.61■■□□□ 1.21
ATG4B-201ENST00000344376 CPDO75976 1380 aa22.61■■□□□ 1.21
ATG4B-201ENST00000344376 USP47Q96K76 1375 aa22.61■■□□□ 1.21
ATG4B-201ENST00000344376 TTC21BQ7Z4L5 1316 aa22.61■■□□□ 1.21
ATG4B-201ENST00000344376 TESK2Q96S53 571 aa22.6■■□□□ 1.21
ATG4B-201ENST00000344376 AKAP12Q02952 1782 aa22.6■■□□□ 1.21
ATG4B-201ENST00000344376 HDGFL2Q7Z4V5 671 aaPredicted RBP22.59■■□□□ 1.21
ATG4B-201ENST00000344376 SEPT12Q8IYM1 358 aa22.59■■□□□ 1.21
ATG4B-201ENST00000344376 A0A0G2JS52 829 aa22.58■■□□□ 1.2
ATG4B-201ENST00000344376 MYT1Q01538 1121 aa22.58■■□□□ 1.2
ATG4B-201ENST00000344376 PIK3C2AO00443 1686 aa22.57■■□□□ 1.2
ATG4B-201ENST00000344376 STRN4Q9NRL3 753 aa22.57■■□□□ 1.2
ATG4B-201ENST00000344376 TERF2IPQ9NYB0 399 aa22.57■■□□□ 1.2
ATG4B-201ENST00000344376 SLIT3O75094 1523 aa22.57■■□□□ 1.2
ATG4B-201ENST00000344376 NINLQ9Y2I6 1382 aa22.56■■□□□ 1.2
ATG4B-201ENST00000344376 ONECUT3O60422 494 aaPredicted RBP22.56■■□□□ 1.2
ATG4B-201ENST00000344376 SPATA31A5Q5VU36 1347 aa22.56■■□□□ 1.2
ATG4B-201ENST00000344376 SPATA31A7Q8IWB4 1347 aa22.56■■□□□ 1.2
ATG4B-201ENST00000344376 EVA1CP58658 441 aa22.55■■□□□ 1.2
ATG4B-201ENST00000344376 TMF1P82094 1093 aa22.55■■□□□ 1.2
ATG4B-201ENST00000344376 FAM98CQ17RN3 349 aaKnown RBP22.55■■□□□ 1.2
ATG4B-201ENST00000344376 SLC12A5Q9H2X9 1139 aa22.55■■□□□ 1.2
ATG4B-201ENST00000344376 MON2Q7Z3U7 1717 aa22.54■■□□□ 1.2
ATG4B-201ENST00000344376 ZBTB7CA1YPR0 619 aa22.54■■□□□ 1.2
ATG4B-201ENST00000344376 KCNH5Q8NCM2 988 aa22.54■■□□□ 1.2
ATG4B-201ENST00000344376 CD163L1Q9NR16 1453 aa22.53■■□□□ 1.2
ATG4B-201ENST00000344376 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.52■■□□□ 1.21e-8■□□□□ 9.2
ATG4B-201ENST00000344376 EDC4Q6P2E9 1401 aaKnown RBP22.51■■□□□ 1.19
ATG4B-201ENST00000344376 CDCA8Q53HL2 280 aa22.5■■□□□ 1.19
ATG4B-201ENST00000344376 KRT27Q7Z3Y8 459 aa22.5■■□□□ 1.19
ATG4B-201ENST00000344376 SPATA31A1Q5TZJ5 1347 aa22.5■■□□□ 1.19
ATG4B-201ENST00000344376 A0A1W2PP64 1363 aa22.5■■□□□ 1.19
ATG4B-201ENST00000344376 LMO7Q8WWI1 1683 aa22.5■■□□□ 1.19
ATG4B-201ENST00000344376 CAMTA1Q9Y6Y1 1673 aa22.5■■□□□ 1.19
ATG4B-201ENST00000344376 AATKQ6ZMQ8 1374 aa22.5■■□□□ 1.19
ATG4B-201ENST00000344376 CCDC125Q86Z20 511 aa22.49■■□□□ 1.19
ATG4B-201ENST00000344376 SOX12O15370 315 aa22.48■■□□□ 1.19
ATG4B-201ENST00000344376 USP31Q70CQ4 1352 aa22.47■■□□□ 1.19
ATG4B-201ENST00000344376 COL5A2P05997 1499 aaPredicted RBP22.47■■□□□ 1.19
ATG4B-201ENST00000344376 LARP1Q6PKG0 1096 aaKnown RBP22.46■■□□□ 1.19
ATG4B-201ENST00000344376 NME9Q86XW9 330 aa22.46■■□□□ 1.19
ATG4B-201ENST00000344376 USP35Q9P2H5 1018 aa22.46■■□□□ 1.19
ATG4B-201ENST00000344376 BRWD3Q6RI45 1802 aa22.46■■□□□ 1.19
ATG4B-201ENST00000344376 ARHGEF25Q86VW2 580 aa22.44■■□□□ 1.18
ATG4B-201ENST00000344376 ANKRD36BQ8N2N9 1353 aa22.44■■□□□ 1.18
ATG4B-201ENST00000344376 THSD7AQ9UPZ6 1657 aa22.44■■□□□ 1.18
ATG4B-201ENST00000344376 BARGINQ6ZT62 677 aa22.43■■□□□ 1.18
ATG4B-201ENST00000344376 TCP11L2Q8N4U5 519 aa22.43■■□□□ 1.18
ATG4B-201ENST00000344376 NFAT5O94916 1531 aa22.43■■□□□ 1.18
ATG4B-201ENST00000344376 BLMP54132 1417 aaPredicted RBP22.42■■□□□ 1.18
ATG4B-201ENST00000344376 ZRANB1Q9UGI0 708 aa22.42■■□□□ 1.18
ATG4B-201ENST00000344376 THRAP3Q9Y2W1 955 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms