RNA–Protein interactions for RNA: ENST00000343217.6

DUSP28-201, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DUSP28, Length 1,555 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-201ENST00000343217 ATRNO75882 1429 aa28.7■■■□□ 2.19
DUSP28-201ENST00000343217 UPF1Q92900 1129 aaKnown RBP eCLIP28.7■■■□□ 2.18
DUSP28-201ENST00000343217 PRR36Q9H6K5 1346 aa28.7■■■□□ 2.18
DUSP28-201ENST00000343217 BCL9LQ86UU0 1499 aa28.7■■■□□ 2.18
DUSP28-201ENST00000343217 ANP32CO43423 234 aa28.69■■■□□ 2.18
DUSP28-201ENST00000343217 PMFBP1Q8TBY8 1022 aa28.69■■■□□ 2.18
DUSP28-201ENST00000343217 TRPM3Q9HCF6 1732 aaPredicted RBP28.68■■■□□ 2.18
DUSP28-201ENST00000343217 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.67■■■□□ 2.18
DUSP28-201ENST00000343217 ABCA3Q99758 1704 aa28.67■■■□□ 2.18
DUSP28-201ENST00000343217 ARHGEF10O15013 1369 aa28.64■■■□□ 2.18
DUSP28-201ENST00000343217 SLIT2O94813 1529 aa28.64■■■□□ 2.18
DUSP28-201ENST00000343217 ITSN1Q15811 1721 aa28.64■■■□□ 2.17
DUSP28-201ENST00000343217 ALS2Q96Q42 1657 aa28.62■■■□□ 2.17
DUSP28-201ENST00000343217 ATP7BP35670 1465 aa28.62■■■□□ 2.17
DUSP28-201ENST00000343217 CABLES1Q8TDN4 633 aa28.59■■■□□ 2.17
DUSP28-201ENST00000343217 PUS7Q96PZ0 661 aaKnown RBP28.59■■■□□ 2.17
DUSP28-201ENST00000343217 LMOD2Q6P5Q4 547 aa28.58■■■□□ 2.17
DUSP28-201ENST00000343217 UNC5CLQ8IV45 518 aa28.57■■■□□ 2.16
DUSP28-201ENST00000343217 EVC2Q86UK5 1308 aa28.57■■■□□ 2.16
DUSP28-201ENST00000343217 NUDT16Q96DE0 195 aaKnown RBP28.56■■■□□ 2.16
DUSP28-201ENST00000343217 NWD2Q9ULI1 1742 aa28.56■■■□□ 2.16
DUSP28-201ENST00000343217 PLCH1Q4KWH8 1693 aa28.55■■■□□ 2.16
DUSP28-201ENST00000343217 TOPAZ1Q8N9V7 1692 aa28.55■■■□□ 2.16
DUSP28-201ENST00000343217 HAP1P54257 671 aaPredicted RBP28.55■■■□□ 2.16
DUSP28-201ENST00000343217 GJD4Q96KN9 370 aaPredicted RBP28.55■■■□□ 2.16
DUSP28-201ENST00000343217 CDK19Q9BWU1 502 aa28.54■■■□□ 2.16
DUSP28-201ENST00000343217 NGDNQ8NEJ9 315 aaKnown RBP28.54■■■□□ 2.16
DUSP28-201ENST00000343217 GLI3P10071 1580 aa28.53■■■□□ 2.16
DUSP28-201ENST00000343217 MYOM1P52179 1685 aa28.52■■■□□ 2.16
DUSP28-201ENST00000343217 CRYBG1Q9Y4K1 1723 aa28.52■■■□□ 2.16
DUSP28-201ENST00000343217 CCER2I3L3R5 266 aa28.5■■■□□ 2.15
DUSP28-201ENST00000343217 PLEKHG5O94827 1062 aa28.5■■■□□ 2.15
DUSP28-201ENST00000343217 ATAD2Q6PL18 1390 aa28.49■■■□□ 2.15
DUSP28-201ENST00000343217 POLR3AO14802 1390 aaPredicted RBP28.48■■■□□ 2.15
DUSP28-201ENST00000343217 PRKRIP1Q9H875 184 aaPredicted RBP28.48■■■□□ 2.15
DUSP28-201ENST00000343217 PANK3Q9H999 370 aa28.48■■■□□ 2.15
DUSP28-201ENST00000343217 CCDC61Q9Y6R9 512 aa28.47■■■□□ 2.15
DUSP28-201ENST00000343217 FAM83GA6ND36 823 aa28.45■■■□□ 2.15
DUSP28-201ENST00000343217 PER1O15534 1290 aaPredicted RBP28.45■■■□□ 2.14
DUSP28-201ENST00000343217 VPS72Q15906 364 aa28.45■■■□□ 2.14
DUSP28-201ENST00000343217 NRAPQ86VF7 1730 aa28.45■■■□□ 2.14
DUSP28-201ENST00000343217 KTN1Q86UP2 1357 aaKnown RBP28.44■■■□□ 2.14
DUSP28-201ENST00000343217 COL14A1Q05707 1796 aaKnown RBP28.44■■■□□ 2.14
DUSP28-201ENST00000343217 PLEKHG3A1L390 1219 aa28.44■■■□□ 2.14
DUSP28-201ENST00000343217 EP400Q96L91 3159 aa28.44■■■□□ 2.14
DUSP28-201ENST00000343217 PAK3O75914 559 aaPredicted RBP28.43■■■□□ 2.14
DUSP28-201ENST00000343217 ACEP12821 1306 aa28.42■■■□□ 2.14
DUSP28-201ENST00000343217 NINLQ9Y2I6 1382 aa28.42■■■□□ 2.14
DUSP28-201ENST00000343217 BRWD3Q6RI45 1802 aa28.41■■■□□ 2.14
DUSP28-201ENST00000343217 PHRF1Q9P1Y6 1649 aaKnown RBP28.39■■■□□ 2.14
DUSP28-201ENST00000343217 SRPK2P78362 688 aaKnown RBP28.39■■■□□ 2.14
DUSP28-201ENST00000343217 KNSTRNQ9Y448 316 aa28.37■■■□□ 2.13
DUSP28-201ENST00000343217 ONECUT3O60422 494 aaPredicted RBP28.37■■■□□ 2.13
DUSP28-201ENST00000343217 CABP2Q9NPB3 220 aa28.37■■■□□ 2.13
DUSP28-201ENST00000343217 RALBP1Q15311 655 aa28.36■■■□□ 2.13
DUSP28-201ENST00000343217 BTG4Q9NY30 223 aa28.36■■■□□ 2.13
DUSP28-201ENST00000343217 PPIP5K1Q6PFW1 1433 aa28.36■■■□□ 2.13
DUSP28-201ENST00000343217 TMC1Q8TDI8 760 aa28.34■■■□□ 2.13
DUSP28-201ENST00000343217 SEPT12Q8IYM1 358 aa28.33■■■□□ 2.12
DUSP28-201ENST00000343217 CCDC9Q9Y3X0 531 aaKnown RBP28.33■■■□□ 2.12
DUSP28-201ENST00000343217 NPC1L1Q9UHC9 1359 aa28.32■■■□□ 2.12
DUSP28-201ENST00000343217 SLC12A5Q9H2X9 1139 aa28.31■■■□□ 2.12
DUSP28-201ENST00000343217 PRDM11Q9NQV5 511 aa28.3■■■□□ 2.12
DUSP28-201ENST00000343217 ANKRD36BQ8N2N9 1353 aa28.3■■■□□ 2.12
DUSP28-201ENST00000343217 CCDC125Q86Z20 511 aa28.29■■■□□ 2.12
DUSP28-201ENST00000343217 PARD3Q8TEW0 1356 aa28.29■■■□□ 2.12
DUSP28-201ENST00000343217 KIAA0232Q92628 1395 aa28.29■■■□□ 2.12
DUSP28-201ENST00000343217 NUTM2GQ5VZR2 741 aa28.28■■■□□ 2.12
DUSP28-201ENST00000343217 BRD4O60885 1362 aaPredicted RBP28.28■■■□□ 2.12
DUSP28-201ENST00000343217 NRKQ7Z2Y5 1582 aa28.28■■■□□ 2.12
DUSP28-201ENST00000343217 ABTB2Q8N961 1025 aa28.27■■■□□ 2.12
DUSP28-201ENST00000343217 USP19O94966 1318 aa28.26■■■□□ 2.11
DUSP28-201ENST00000343217 AMER1Q5JTC6 1135 aaPredicted RBP28.26■■■□□ 2.11
DUSP28-201ENST00000343217 CABP1Q9NZU7 370 aa28.26■■■□□ 2.11
DUSP28-201ENST00000343217 SPATA31A5Q5VU36 1347 aa28.25■■■□□ 2.11
DUSP28-201ENST00000343217 SPATA31A7Q8IWB4 1347 aa28.25■■■□□ 2.11
DUSP28-201ENST00000343217 USP6P35125 1406 aa28.24■■■□□ 2.11
DUSP28-201ENST00000343217 MYBBP1AQ9BQG0 1328 aaKnown RBP28.24■■■□□ 2.11
DUSP28-201ENST00000343217 TERF2IPQ9NYB0 399 aa28.24■■■□□ 2.11
DUSP28-201ENST00000343217 ZC3H6P61129 1189 aaKnown RBP28.23■■■□□ 2.11
DUSP28-201ENST00000343217 CARD14Q9BXL6 1004 aa28.23■■■□□ 2.11
DUSP28-201ENST00000343217 CNGB1Q14028 1251 aaPredicted RBP28.22■■■□□ 2.11
DUSP28-201ENST00000343217 CHRNA2Q15822 529 aa28.22■■■□□ 2.11
DUSP28-201ENST00000343217 FAM98CQ17RN3 349 aaKnown RBP28.22■■■□□ 2.11
DUSP28-201ENST00000343217 BLMP54132 1417 aaPredicted RBP28.21■■■□□ 2.11
DUSP28-201ENST00000343217 CC2D1BQ5T0F9 858 aaKnown RBP28.21■■■□□ 2.11
DUSP28-201ENST00000343217 SSH2Q76I76 1423 aa28.21■■■□□ 2.11
DUSP28-201ENST00000343217 KRT27Q7Z3Y8 459 aa28.21■■■□□ 2.11
DUSP28-201ENST00000343217 NSD3Q9BZ95 1437 aa28.21■■■□□ 2.11
DUSP28-201ENST00000343217 CPDO75976 1380 aa28.21■■■□□ 2.11
DUSP28-201ENST00000343217 NLRP13Q86W25 1043 aa28.2■■■□□ 2.11
DUSP28-201ENST00000343217 THSD7AQ9UPZ6 1657 aa28.2■■■□□ 2.11
DUSP28-201ENST00000343217 LMO7Q8WWI1 1683 aa28.2■■■□□ 2.1
DUSP28-201ENST00000343217 AKAP12Q02952 1782 aa28.19■■■□□ 2.1
DUSP28-201ENST00000343217 HDGFL2Q7Z4V5 671 aaPredicted RBP28.19■■■□□ 2.1
DUSP28-201ENST00000343217 A0A1W2PP64 1363 aa28.19■■■□□ 2.1
DUSP28-201ENST00000343217 MRS2Q9HD23 443 aa28.18■■■□□ 2.1
DUSP28-201ENST00000343217 SPATA31A1Q5TZJ5 1347 aa28.17■■■□□ 2.1
DUSP28-201ENST00000343217 CAMTA1Q9Y6Y1 1673 aa28.17■■■□□ 2.1
DUSP28-201ENST00000343217 CD163L1Q9NR16 1453 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms