RNA–Protein interactions for RNA: ENST00000342916.7

EGFR-202, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-202ENST00000342916 SLAIN2Q9P270 581 aa25.48■■□□□ 1.67
EGFR-202ENST00000342916 POLR3AO14802 1390 aaPredicted RBP25.48■■□□□ 1.67
EGFR-202ENST00000342916 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.48■■□□□ 1.67
EGFR-202ENST00000342916 DDX17Q92841 729 aaKnown RBP25.48■■□□□ 1.67
EGFR-202ENST00000342916 FOXO3O43524 673 aa25.47■■□□□ 1.67
EGFR-202ENST00000342916 XPCQ01831 940 aaPredicted RBP25.47■■□□□ 1.67
EGFR-202ENST00000342916 NRKQ7Z2Y5 1582 aa25.46■■□□□ 1.67
EGFR-202ENST00000342916 USP6P35125 1406 aa25.45■■□□□ 1.66
EGFR-202ENST00000342916 KIF1AQ12756 1690 aa25.43■■□□□ 1.66
EGFR-202ENST00000342916 BRINP3Q76B58 766 aa25.43■■□□□ 1.66
EGFR-202ENST00000342916 KIF20BQ96Q89 1820 aa25.43■■□□□ 1.66
EGFR-202ENST00000342916 EDC4Q6P2E9 1401 aaKnown RBP25.42■■□□□ 1.66
EGFR-202ENST00000342916 ZNF692Q9BU19 519 aaPredicted RBP25.41■■□□□ 1.66
EGFR-202ENST00000342916 ZRANB1Q9UGI0 708 aa25.4■■□□□ 1.66
EGFR-202ENST00000342916 NME9Q86XW9 330 aa25.4■■□□□ 1.66
EGFR-202ENST00000342916 GGNBP2Q9H3C7 697 aa25.4■■□□□ 1.66
EGFR-202ENST00000342916 SSH2Q76I76 1423 aa25.39■■□□□ 1.66
EGFR-202ENST00000342916 CGNL1Q0VF96 1302 aa25.39■■□□□ 1.66
EGFR-202ENST00000342916 SENP3-EIF4A1A0A087X0R7 540 aa25.39■■□□□ 1.66
EGFR-202ENST00000342916 FYB1O15117 783 aa25.39■■□□□ 1.65
EGFR-202ENST00000342916 PSME1Q06323 249 aa25.39■■□□□ 1.65
EGFR-202ENST00000342916 TTC21BQ7Z4L5 1316 aa25.38■■□□□ 1.65
EGFR-202ENST00000342916 BLMP54132 1417 aaPredicted RBP25.37■■□□□ 1.65
EGFR-202ENST00000342916 INSRP06213 1382 aa25.37■■□□□ 1.65
EGFR-202ENST00000342916 ROBO1Q9Y6N7 1651 aa25.36■■□□□ 1.65
EGFR-202ENST00000342916 PAK3O75914 559 aaPredicted RBP25.36■■□□□ 1.65
EGFR-202ENST00000342916 CERKQ8TCT0 537 aa25.36■■□□□ 1.65
EGFR-202ENST00000342916 PIK3C2AO00443 1686 aa25.36■■□□□ 1.65
EGFR-202ENST00000342916 TRPM3Q9HCF6 1732 aaPredicted RBP25.35■■□□□ 1.65
EGFR-202ENST00000342916 ANKRD26Q9UPS8 1709 aa25.34■■□□□ 1.65
EGFR-202ENST00000342916 TNNT2P45379 298 aaPredicted RBP25.34■■□□□ 1.65
EGFR-202ENST00000342916 NUTM2GQ5VZR2 741 aa25.33■■□□□ 1.65
EGFR-202ENST00000342916 KRT28Q7Z3Y7 464 aa25.33■■□□□ 1.65
EGFR-202ENST00000342916 MORC1Q86VD1 984 aa25.33■■□□□ 1.65
EGFR-202ENST00000342916 NSD2O96028 1365 aa25.33■■□□□ 1.65
EGFR-202ENST00000342916 PIP4K2BP78356 416 aa25.32■■□□□ 1.64
EGFR-202ENST00000342916 PXDNQ92626 1479 aa25.31■■□□□ 1.64
EGFR-202ENST00000342916 UBAP1LF5GYI3 381 aa25.31■■□□□ 1.64
EGFR-202ENST00000342916 ADAMTS8Q9UP79 889 aa25.31■■□□□ 1.64
EGFR-202ENST00000342916 FBLN1P23142 703 aa25.3■■□□□ 1.64
EGFR-202ENST00000342916 SUPT16HQ9Y5B9 1047 aaKnown RBP25.3■■□□□ 1.64
EGFR-202ENST00000342916 MARF1Q9Y4F3 1742 aaKnown RBP25.3■■□□□ 1.64
EGFR-202ENST00000342916 NHSL1Q5SYE7 1610 aa25.3■■□□□ 1.64
EGFR-202ENST00000342916 PLEKHG5O94827 1062 aa25.29■■□□□ 1.64
EGFR-202ENST00000342916 NPHP3Q7Z494 1330 aa25.29■■□□□ 1.64
EGFR-202ENST00000342916 ABTB2Q8N961 1025 aa25.28■■□□□ 1.64
EGFR-202ENST00000342916 TOM1O60784 492 aa25.27■■□□□ 1.64
EGFR-202ENST00000342916 TTC21AQ8NDW8 1320 aa25.27■■□□□ 1.64
EGFR-202ENST00000342916 LMOD2Q6P5Q4 547 aa25.27■■□□□ 1.64
EGFR-202ENST00000342916 IQSEC2Q5JU85 1478 aa25.26■■□□□ 1.63
EGFR-202ENST00000342916 SMG6Q86US8 1419 aaKnown RBP25.26■■□□□ 1.63
EGFR-202ENST00000342916 ALS2Q96Q42 1657 aa25.26■■□□□ 1.63
EGFR-202ENST00000342916 WDR43Q15061 677 aaKnown RBP eCLIP25.26■■□□□ 1.63
EGFR-202ENST00000342916 SHPRHQ149N8 1683 aa25.25■■□□□ 1.63
EGFR-202ENST00000342916 OVOS2A0A0J9YW53 1432 aa25.25■■□□□ 1.63
EGFR-202ENST00000342916 OVOS2Q6IE36 1432 aa25.25■■□□□ 1.63
EGFR-202ENST00000342916 SOX12O15370 315 aa25.24■■□□□ 1.63
EGFR-202ENST00000342916 NLRP6P59044 892 aa25.24■■□□□ 1.63
EGFR-202ENST00000342916 COG3Q96JB2 828 aa25.23■■□□□ 1.63
EGFR-202ENST00000342916 SOS2Q07890 1332 aaPredicted RBP25.22■■□□□ 1.63
EGFR-202ENST00000342916 FKBP8Q14318 412 aa25.21■■□□□ 1.63
EGFR-202ENST00000342916 SALL2Q9Y467 1007 aaPredicted RBP25.21■■□□□ 1.63
EGFR-202ENST00000342916 MAP2P11137 1827 aaKnown RBP25.21■■□□□ 1.63
EGFR-202ENST00000342916 NUDCQ9Y266 331 aa25.2■■□□□ 1.62
EGFR-202ENST00000342916 USP54Q70EL1 1684 aa25.19■■□□□ 1.62
EGFR-202ENST00000342916 MTHFSP49914 203 aa25.18■■□□□ 1.62
EGFR-202ENST00000342916 TNS3Q68CZ2 1445 aa25.18■■□□□ 1.62
EGFR-202ENST00000342916 SBNO1A3KN83 1393 aa25.18■■□□□ 1.62
EGFR-202ENST00000342916 USP31Q70CQ4 1352 aa25.18■■□□□ 1.62
EGFR-202ENST00000342916 AHDC1Q5TGY3 1603 aaPredicted RBP25.18■■□□□ 1.62
EGFR-202ENST00000342916 SPATA31A3Q5VYP0 1347 aa25.18■■□□□ 1.62
EGFR-202ENST00000342916 PHLPP1O60346 1717 aa25.18■■□□□ 1.62
EGFR-202ENST00000342916 NEFLP07196 543 aa25.17■■□□□ 1.62
EGFR-202ENST00000342916 RRS1Q15050 365 aaKnown RBP25.15■■□□□ 1.62
EGFR-202ENST00000342916 CABLES1Q8TDN4 633 aa25.15■■□□□ 1.62
EGFR-202ENST00000342916 MED1Q15648 1581 aaPredicted RBP25.15■■□□□ 1.62
EGFR-202ENST00000342916 COL16A1Q07092 1604 aaPredicted RBP25.13■■□□□ 1.61
EGFR-202ENST00000342916 EMILIN1Q9Y6C2 1016 aa25.13■■□□□ 1.61
EGFR-202ENST00000342916 CRYBG1Q9Y4K1 1723 aa25.12■■□□□ 1.61
EGFR-202ENST00000342916 CCDC146Q8IYE0 955 aa25.12■■□□□ 1.61
EGFR-202ENST00000342916 PPM1GO15355 546 aaPredicted RBP25.11■■□□□ 1.61
EGFR-202ENST00000342916 POLKQ9UBT6 870 aa25.11■■□□□ 1.61
EGFR-202ENST00000342916 PDE3BQ13370 1112 aa25.1■■□□□ 1.61
EGFR-202ENST00000342916 PHRF1Q9P1Y6 1649 aaKnown RBP25.1■■□□□ 1.61
EGFR-202ENST00000342916 LTN1O94822 1766 aa25.09■■□□□ 1.61
EGFR-202ENST00000342916 PEAK1Q9H792 1746 aa25.09■■□□□ 1.61
EGFR-202ENST00000342916 CFAP53Q96M91 514 aa25.09■■□□□ 1.61
EGFR-202ENST00000342916 SLIT3O75094 1523 aa25.09■■□□□ 1.61
EGFR-202ENST00000342916 NFAT5O94916 1531 aa25.09■■□□□ 1.61
EGFR-202ENST00000342916 COL3A1P02461 1466 aaPredicted RBP25.08■■□□□ 1.61
EGFR-202ENST00000342916 USP19O94966 1318 aa25.08■■□□□ 1.61
EGFR-202ENST00000342916 ARHGEF10O15013 1369 aa25.08■■□□□ 1.61
EGFR-202ENST00000342916 CDCA7LQ96GN5 454 aa25.08■■□□□ 1.6
EGFR-202ENST00000342916 ABCA3Q99758 1704 aa25.07■■□□□ 1.6
EGFR-202ENST00000342916 GCP02774 474 aa25.06■■□□□ 1.6
EGFR-202ENST00000342916 AATKQ6ZMQ8 1374 aa25.06■■□□□ 1.6
EGFR-202ENST00000342916 IRX6P78412 446 aaPredicted RBP25.06■■□□□ 1.6
EGFR-202ENST00000342916 MAP3K19Q56UN5 1328 aa25.06■■□□□ 1.6
EGFR-202ENST00000342916 ZNF521Q96K83 1311 aa25.05■■□□□ 1.6
EGFR-202ENST00000342916 ZBTB7CA1YPR0 619 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms