RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 FOXO3O43524 673 aa22.24■■□□□ 1.15
SNED1-202ENST00000342631 CC2D1BQ5T0F9 858 aaKnown RBP22.24■■□□□ 1.15
SNED1-202ENST00000342631 ANKRD26Q9UPS8 1709 aa22.24■■□□□ 1.15
SNED1-202ENST00000342631 FYB1O15117 783 aa22.23■■□□□ 1.15
SNED1-202ENST00000342631 TOM1O60784 492 aa22.23■■□□□ 1.15
SNED1-202ENST00000342631 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.23■■□□□ 1.15
SNED1-202ENST00000342631 MIER1Q8N108 512 aa22.22■■□□□ 1.15
SNED1-202ENST00000342631 CERKQ8TCT0 537 aa22.22■■□□□ 1.15
SNED1-202ENST00000342631 KRT28Q7Z3Y7 464 aa22.19■■□□□ 1.14
SNED1-202ENST00000342631 MORC1Q86VD1 984 aa22.19■■□□□ 1.14
SNED1-202ENST00000342631 TRPM3Q9HCF6 1732 aaPredicted RBP22.19■■□□□ 1.14
SNED1-202ENST00000342631 SBNO1A3KN83 1393 aa22.18■■□□□ 1.14
SNED1-202ENST00000342631 USP31Q70CQ4 1352 aa22.18■■□□□ 1.14
SNED1-202ENST00000342631 NHSL1Q5SYE7 1610 aa22.17■■□□□ 1.14
SNED1-202ENST00000342631 MYBBP1AQ9BQG0 1328 aaKnown RBP22.17■■□□□ 1.14
SNED1-202ENST00000342631 CCER2I3L3R5 266 aa22.17■■□□□ 1.14
SNED1-202ENST00000342631 NME9Q86XW9 330 aa22.17■■□□□ 1.14
SNED1-202ENST00000342631 COG3Q96JB2 828 aa22.17■■□□□ 1.14
SNED1-202ENST00000342631 GGNBP2Q9H3C7 697 aa22.17■■□□□ 1.14
SNED1-202ENST00000342631 PXDNQ92626 1479 aa22.17■■□□□ 1.14
SNED1-202ENST00000342631 USP54Q70EL1 1684 aa22.17■■□□□ 1.14
SNED1-202ENST00000342631 SCAF1Q9H7N4 1312 aaKnown RBP22.17■■□□□ 1.14
SNED1-202ENST00000342631 ROBO1Q9Y6N7 1651 aa22.16■■□□□ 1.14
SNED1-202ENST00000342631 PIK3C2AO00443 1686 aa22.16■■□□□ 1.14
SNED1-202ENST00000342631 PAK3O75914 559 aaPredicted RBP22.16■■□□□ 1.14
SNED1-202ENST00000342631 CNGB1Q14028 1251 aaPredicted RBP22.16■■□□□ 1.14
SNED1-202ENST00000342631 OVOS2A0A0J9YW53 1432 aa22.15■■□□□ 1.14
SNED1-202ENST00000342631 OVOS2Q6IE36 1432 aa22.15■■□□□ 1.14
SNED1-202ENST00000342631 SOS2Q07890 1332 aaPredicted RBP22.14■■□□□ 1.14
SNED1-202ENST00000342631 ABTB2Q8N961 1025 aa22.14■■□□□ 1.13
SNED1-202ENST00000342631 UBAP1LF5GYI3 381 aa22.13■■□□□ 1.13
SNED1-202ENST00000342631 AHDC1Q5TGY3 1603 aaPredicted RBP22.13■■□□□ 1.13
SNED1-202ENST00000342631 ALS2Q96Q42 1657 aa22.12■■□□□ 1.13
SNED1-202ENST00000342631 NLRP13Q86W25 1043 aa22.12■■□□□ 1.13
SNED1-202ENST00000342631 TNS3Q68CZ2 1445 aa22.11■■□□□ 1.13
SNED1-202ENST00000342631 XPCQ01831 940 aaPredicted RBP22.11■■□□□ 1.13
SNED1-202ENST00000342631 PPP2R1AP30153 589 aa22.1■■□□□ 1.13
SNED1-202ENST00000342631 NLRP6P59044 892 aa22.1■■□□□ 1.13
SNED1-202ENST00000342631 ARHGEF10O15013 1369 aa22.1■■□□□ 1.13
SNED1-202ENST00000342631 DDX17Q92841 729 aaKnown RBP22.1■■□□□ 1.13
SNED1-202ENST00000342631 AATKQ6ZMQ8 1374 aa22.09■■□□□ 1.13
SNED1-202ENST00000342631 SPATA31A3Q5VYP0 1347 aa22.09■■□□□ 1.13
SNED1-202ENST00000342631 ZRANB1Q9UGI0 708 aa22.08■■□□□ 1.12
SNED1-202ENST00000342631 MARF1Q9Y4F3 1742 aaKnown RBP22.07■■□□□ 1.12
SNED1-202ENST00000342631 TNNT2P45379 298 aaPredicted RBP22.04■■□□□ 1.12
SNED1-202ENST00000342631 KCNH5Q8NCM2 988 aa22.04■■□□□ 1.12
SNED1-202ENST00000342631 USP19O94966 1318 aa22.04■■□□□ 1.12
SNED1-202ENST00000342631 PIP4K2BP78356 416 aa22.04■■□□□ 1.12
SNED1-202ENST00000342631 LMOD2Q6P5Q4 547 aa22.04■■□□□ 1.12
SNED1-202ENST00000342631 LRRC59Q96AG4 307 aaKnown RBP22.04■■□□□ 1.12
SNED1-202ENST00000342631 MED1Q15648 1581 aaPredicted RBP22.03■■□□□ 1.12
SNED1-202ENST00000342631 SLIT3O75094 1523 aa22.03■■□□□ 1.12
SNED1-202ENST00000342631 MAP2P11137 1827 aaKnown RBP22.03■■□□□ 1.12
SNED1-202ENST00000342631 PHLPP1O60346 1717 aa22.02■■□□□ 1.12
SNED1-202ENST00000342631 NUTM2GQ5VZR2 741 aa22.02■■□□□ 1.11
SNED1-202ENST00000342631 MRS2Q9HD23 443 aa22.02■■□□□ 1.11
SNED1-202ENST00000342631 SMG6Q86US8 1419 aaKnown RBP22.02■■□□□ 1.11
SNED1-202ENST00000342631 MTHFSP49914 203 aa22■■□□□ 1.11
SNED1-202ENST00000342631 KIF24Q5T7B8 1368 aa21.99■■□□□ 1.11
SNED1-202ENST00000342631 CFAP53Q96M91 514 aa21.99■■□□□ 1.11
SNED1-202ENST00000342631 POLKQ9UBT6 870 aa21.99■■□□□ 1.11
SNED1-202ENST00000342631 COL16A1Q07092 1604 aaPredicted RBP21.99■■□□□ 1.11
SNED1-202ENST00000342631 INSRP06213 1382 aa21.97■■□□□ 1.11
SNED1-202ENST00000342631 NFAT5O94916 1531 aa21.97■■□□□ 1.11
SNED1-202ENST00000342631 CRYBG1Q9Y4K1 1723 aa21.97■■□□□ 1.11
SNED1-202ENST00000342631 GCP02774 474 aa21.97■■□□□ 1.11
SNED1-202ENST00000342631 PNPLA6Q8IY17 1366 aa21.96■■□□□ 1.11
SNED1-202ENST00000342631 CDK12Q9NYV4 1490 aaPredicted RBP21.96■■□□□ 1.11
SNED1-202ENST00000342631 CCDC184Q52MB2 194 aa21.96■■□□□ 1.11
SNED1-202ENST00000342631 PHRF1Q9P1Y6 1649 aaKnown RBP21.96■■□□□ 1.11
SNED1-202ENST00000342631 COL22A1Q8NFW1 1626 aaPredicted RBP21.95■■□□□ 1.1
SNED1-202ENST00000342631 RRS1Q15050 365 aaKnown RBP21.94■■□□□ 1.1
SNED1-202ENST00000342631 RTL1A6NKG5 1358 aa21.93■■□□□ 1.1
SNED1-202ENST00000342631 FBLN1P23142 703 aa21.93■■□□□ 1.1
SNED1-202ENST00000342631 EMILIN1Q9Y6C2 1016 aa21.93■■□□□ 1.1
SNED1-202ENST00000342631 MAP3K19Q56UN5 1328 aa21.92■■□□□ 1.1
SNED1-202ENST00000342631 SOX12O15370 315 aa21.92■■□□□ 1.1
SNED1-202ENST00000342631 PNISRQ8TF01 805 aaKnown RBP21.92■■□□□ 1.1
SNED1-202ENST00000342631 LTN1O94822 1766 aa21.91■■□□□ 1.1
SNED1-202ENST00000342631 FLT4P35916 1363 aa21.91■■□□□ 1.1
SNED1-202ENST00000342631 PPM1GO15355 546 aaPredicted RBP21.9■■□□□ 1.1
SNED1-202ENST00000342631 ARHGEF25Q86VW2 580 aa21.9■■□□□ 1.1
SNED1-202ENST00000342631 ABCA3Q99758 1704 aa21.9■■□□□ 1.1
SNED1-202ENST00000342631 AMPHP49418 695 aa21.9■■□□□ 1.1
SNED1-202ENST00000342631 CPDO75976 1380 aa21.9■■□□□ 1.1
SNED1-202ENST00000342631 COL3A1P02461 1466 aaPredicted RBP21.89■■□□□ 1.1
SNED1-202ENST00000342631 ABCC6O95255 1503 aa21.89■■□□□ 1.09
SNED1-202ENST00000342631 PEAK1Q9H792 1746 aa21.88■■□□□ 1.09
SNED1-202ENST00000342631 NUDCQ9Y266 331 aa21.88■■□□□ 1.09
SNED1-202ENST00000342631 SHPRHQ149N8 1683 aa21.88■■□□□ 1.09
SNED1-202ENST00000342631 DIAPH1O60610 1272 aaKnown RBP21.87■■□□□ 1.09
SNED1-202ENST00000342631 CABLES1Q8TDN4 633 aa21.87■■□□□ 1.09
SNED1-202ENST00000342631 IP6K1Q92551 441 aa21.87■■□□□ 1.09
SNED1-202ENST00000342631 HAP1P54257 671 aaPredicted RBP21.86■■□□□ 1.09
SNED1-202ENST00000342631 WDR43Q15061 677 aaKnown RBP eCLIP21.86■■□□□ 1.09
SNED1-202ENST00000342631 JCADQ9P266 1359 aa21.85■■□□□ 1.09
SNED1-202ENST00000342631 HOXC9P31274 260 aa21.85■■□□□ 1.09
SNED1-202ENST00000342631 BLMP54132 1417 aaPredicted RBP21.84■■□□□ 1.09
SNED1-202ENST00000342631 PLEKHG5O94827 1062 aa21.83■■□□□ 1.09
SNED1-202ENST00000342631 ZC3H6P61129 1189 aaKnown RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms