RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TTC39AQ5SRH9 613 aa18.05■□□□□ 0.48
UBE3B-202ENST00000342494 CHMP5Q9NZZ3 219 aa18.05■□□□□ 0.48
UBE3B-202ENST00000342494 TMEM132AQ24JP5 1023 aa18.05■□□□□ 0.48
UBE3B-202ENST00000342494 EPS15P42566 896 aa18.05■□□□□ 0.48
UBE3B-202ENST00000342494 RRP12Q5JTH9 1297 aaKnown RBP18.05■□□□□ 0.48
UBE3B-202ENST00000342494 ERC1Q8IUD2 1116 aa18.05■□□□□ 0.48
UBE3B-202ENST00000342494 CASKIN1Q8WXD9 1431 aa18.05■□□□□ 0.48
UBE3B-202ENST00000342494 HOMER1Q86YM7 354 aa18.05■□□□□ 0.48
UBE3B-202ENST00000342494 PNISRQ8TF01 805 aaKnown RBP18.05■□□□□ 0.48
UBE3B-202ENST00000342494 NAP1L1P55209 391 aaKnown RBP18.04■□□□□ 0.48
UBE3B-202ENST00000342494 RAPGEF3O95398 923 aa18.04■□□□□ 0.48
UBE3B-202ENST00000342494 GPS2Q13227 327 aa18.04■□□□□ 0.48
UBE3B-202ENST00000342494 LRRC9Q6ZRR7 1453 aa18.04■□□□□ 0.48
UBE3B-202ENST00000342494 FBXO3Q9UK99 471 aa18.04■□□□□ 0.48
UBE3B-202ENST00000342494 NCAPD3P42695 1498 aa18.03■□□□□ 0.48
UBE3B-202ENST00000342494 OFD1O75665 1012 aa18.03■□□□□ 0.48
UBE3B-202ENST00000342494 ATP2B2Q01814 1243 aa18.03■□□□□ 0.48
UBE3B-202ENST00000342494 C22orf23Q9BZE7 217 aa18.03■□□□□ 0.48
UBE3B-202ENST00000342494 HIP1O00291 1037 aa18.03■□□□□ 0.48
UBE3B-202ENST00000342494 EXOSC9Q06265 439 aaKnown RBP18.03■□□□□ 0.48
UBE3B-202ENST00000342494 SLC12A5Q9H2X9 1139 aa18.02■□□□□ 0.48
UBE3B-202ENST00000342494 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.02■□□□□ 0.482e-6■■■■■ 231.7
UBE3B-202ENST00000342494 ATP2B1P20020 1258 aa18.02■□□□□ 0.47
UBE3B-202ENST00000342494 WWC2Q6AWC2 1192 aa18.02■□□□□ 0.47
UBE3B-202ENST00000342494 GNAI2P04899 355 aa18.01■□□□□ 0.47
UBE3B-202ENST00000342494 PPP2R1AP30153 589 aa18.01■□□□□ 0.47
UBE3B-202ENST00000342494 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.01■□□□□ 0.47
UBE3B-202ENST00000342494 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.01■□□□□ 0.47
UBE3B-202ENST00000342494 SLC4A2P04920 1241 aa18.01■□□□□ 0.47
UBE3B-202ENST00000342494 MPHOSPH8Q99549 860 aa18.01■□□□□ 0.47
UBE3B-202ENST00000342494 RTEL1-TNFRSF6BF6WH68 1400 aa18.01■□□□□ 0.47
UBE3B-202ENST00000342494 OLFM4Q6UX06 510 aa18.01■□□□□ 0.47
UBE3B-202ENST00000342494 ZFYVE27Q5T4F4 411 aa18■□□□□ 0.47
UBE3B-202ENST00000342494 PLEKHH2Q8IVE3 1493 aa18■□□□□ 0.47
UBE3B-202ENST00000342494 HFM1A2PYH4 1435 aa18■□□□□ 0.47
UBE3B-202ENST00000342494 RBM5P52756 815 aaKnown RBP eCLIP18■□□□□ 0.47
UBE3B-202ENST00000342494 SDF4Q9BRK5 362 aa18■□□□□ 0.47
UBE3B-202ENST00000342494 CDK5RAP3Q96JB5 506 aa18■□□□□ 0.47
UBE3B-202ENST00000342494 BRD4O60885 1362 aaPredicted RBP18■□□□□ 0.47
UBE3B-202ENST00000342494 MYL6BP14649 208 aa17.99■□□□□ 0.47
UBE3B-202ENST00000342494 XPCQ01831 940 aaPredicted RBP17.99■□□□□ 0.47
UBE3B-202ENST00000342494 NBPF1Q3BBV0 1214 aa17.98■□□□□ 0.47
UBE3B-202ENST00000342494 MRC2Q9UBG0 1479 aa17.98■□□□□ 0.47
UBE3B-202ENST00000342494 NACAP1Q9BZK3 213 aa17.98■□□□□ 0.47
UBE3B-202ENST00000342494 CCDC57Q2TAC2 916 aa17.97■□□□□ 0.47
UBE3B-202ENST00000342494 SRCIN1Q9C0H9 1055 aa17.97■□□□□ 0.47
UBE3B-202ENST00000342494 SIL1Q9H173 461 aa17.97■□□□□ 0.47
UBE3B-202ENST00000342494 C9orf84Q5VXU9 1444 aa17.97■□□□□ 0.47
UBE3B-202ENST00000342494 ZNF428Q96B54 188 aa17.97■□□□□ 0.47
UBE3B-202ENST00000342494 NAT10Q9H0A0 1025 aaKnown RBP17.96■□□□□ 0.47
UBE3B-202ENST00000342494 IFT140Q96RY7 1462 aa17.96■□□□□ 0.47
UBE3B-202ENST00000342494 TXLNAP40222 546 aa17.96■□□□□ 0.47
UBE3B-202ENST00000342494 KRT18P05783 430 aaKnown RBP17.95■□□□□ 0.46
UBE3B-202ENST00000342494 C1orf115Q9H7X2 142 aa17.95■□□□□ 0.46
UBE3B-202ENST00000342494 CCT4P50991 539 aaKnown RBP17.95■□□□□ 0.46
UBE3B-202ENST00000342494 ZC3H6P61129 1189 aaKnown RBP17.95■□□□□ 0.46
UBE3B-202ENST00000342494 GSE1Q14687 1217 aa17.95■□□□□ 0.46
UBE3B-202ENST00000342494 HMGB2P26583 209 aaKnown RBP17.95■□□□□ 0.46
UBE3B-202ENST00000342494 TSR2Q969E8 191 aaKnown RBP17.94■□□□□ 0.46
UBE3B-202ENST00000342494 PAF1Q8N7H5 531 aa17.94■□□□□ 0.46
UBE3B-202ENST00000342494 BICDL1Q6ZP65 573 aa17.94■□□□□ 0.46
UBE3B-202ENST00000342494 STK11IPQ8N1F8 1099 aa17.93■□□□□ 0.46
UBE3B-202ENST00000342494 ZSCAN29Q8IWY8 852 aaPredicted RBP17.93■□□□□ 0.46
UBE3B-202ENST00000342494 NOB1Q9ULX3 412 aaKnown RBP17.93■□□□□ 0.46
UBE3B-202ENST00000342494 KIF21BO75037 1637 aa17.93■□□□□ 0.46
UBE3B-202ENST00000342494 CFTRP13569 1480 aa17.93■□□□□ 0.46
UBE3B-202ENST00000342494 RPGRIP1LQ68CZ1 1315 aa17.92■□□□□ 0.46
UBE3B-202ENST00000342494 BTBD11A6QL63 1104 aa17.92■□□□□ 0.46
UBE3B-202ENST00000342494 NEK4P51957 841 aa17.92■□□□□ 0.46
UBE3B-202ENST00000342494 PDILTQ8N807 584 aa17.92■□□□□ 0.46
UBE3B-202ENST00000342494 PDCP20941 246 aa17.92■□□□□ 0.46
UBE3B-202ENST00000342494 RRS1Q15050 365 aaKnown RBP17.91■□□□□ 0.46
UBE3B-202ENST00000342494 HSP90AB2PQ58FF8 381 aa17.91■□□□□ 0.46
UBE3B-202ENST00000342494 ZSCAN25Q6NSZ9 544 aa17.91■□□□□ 0.46
UBE3B-202ENST00000342494 GCC1Q96CN9 775 aa17.91■□□□□ 0.46
UBE3B-202ENST00000342494 CCDC173Q0VFZ6 552 aa17.91■□□□□ 0.46
UBE3B-202ENST00000342494 CDCA7LQ96GN5 454 aa17.9■□□□□ 0.46
UBE3B-202ENST00000342494 SETQ01105 290 aaPredicted RBP17.9■□□□□ 0.46
UBE3B-202ENST00000342494 ERBINQ96RT1 1412 aa17.9■□□□□ 0.46
UBE3B-202ENST00000342494 TRIM22Q8IYM9 498 aa17.9■□□□□ 0.46
UBE3B-202ENST00000342494 KINO60870 393 aaKnown RBP17.9■□□□□ 0.46
UBE3B-202ENST00000342494 PATL2C9JE40 543 aaKnown RBP17.89■□□□□ 0.46
UBE3B-202ENST00000342494 RUFY1Q96T51 708 aa17.89■□□□□ 0.46
UBE3B-202ENST00000342494 LRRCC1Q9C099 1032 aa17.89■□□□□ 0.46
UBE3B-202ENST00000342494 FKBP4Q02790 459 aaKnown RBP eCLIP17.89■□□□□ 0.45
UBE3B-202ENST00000342494 CEP126Q9P2H0 1117 aa17.89■□□□□ 0.45
UBE3B-202ENST00000342494 ATAD2Q6PL18 1390 aa17.89■□□□□ 0.45
UBE3B-202ENST00000342494 IFT57Q9NWB7 429 aa17.89■□□□□ 0.45
UBE3B-202ENST00000342494 STARD3NLO95772 234 aa17.89■□□□□ 0.45
UBE3B-202ENST00000342494 SOGA3Q5TF21 947 aa17.89■□□□□ 0.45
UBE3B-202ENST00000342494 KCNH5Q8NCM2 988 aa17.89■□□□□ 0.45
UBE3B-202ENST00000342494 CDR1P51861 262 aa17.88■□□□□ 0.45
UBE3B-202ENST00000342494 NESP48681 1621 aa17.88■□□□□ 0.45
UBE3B-202ENST00000342494 CCDC69A6NI79 296 aa17.88■□□□□ 0.45
UBE3B-202ENST00000342494 RDXP35241 583 aaKnown RBP17.88■□□□□ 0.45
UBE3B-202ENST00000342494 STK38Q15208 465 aa17.88■□□□□ 0.45
UBE3B-202ENST00000342494 ZNF396Q96N95 335 aaPredicted RBP17.88■□□□□ 0.45
UBE3B-202ENST00000342494 MAGEC2Q9UBF1 373 aaPredicted RBP17.88■□□□□ 0.45
UBE3B-202ENST00000342494 IGHMBP2P38935 993 aaKnown RBP17.88■□□□□ 0.45
UBE3B-202ENST00000342494 MCM2P49736 904 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms