RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 MTHFSP49914 203 aa18.23■□□□□ 0.51
COL11A2-201ENST00000341947 MAGEC2Q9UBF1 373 aaPredicted RBP18.23■□□□□ 0.51
COL11A2-201ENST00000341947 FGD6Q6ZV73 1430 aa18.22■□□□□ 0.51
COL11A2-201ENST00000341947 ANKRD50Q9ULJ7 1429 aa18.22■□□□□ 0.51
COL11A2-201ENST00000341947 KRT18P05783 430 aaKnown RBP18.22■□□□□ 0.51
COL11A2-201ENST00000341947 SMARCA4P51532 1647 aa18.22■□□□□ 0.51
COL11A2-201ENST00000341947 HSP90B2PQ58FF3 399 aa18.22■□□□□ 0.51
COL11A2-201ENST00000341947 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.22■□□□□ 0.51
COL11A2-201ENST00000341947 LETM1O95202 739 aaPredicted RBP18.21■□□□□ 0.51
COL11A2-201ENST00000341947 ZNF644Q9H582 1327 aaPredicted RBP18.21■□□□□ 0.51
COL11A2-201ENST00000341947 FGD5Q6ZNL6 1462 aa18.21■□□□□ 0.51
COL11A2-201ENST00000341947 ATP2B1P20020 1258 aa18.21■□□□□ 0.5
COL11A2-201ENST00000341947 FILIP1LQ4L180 1135 aa18.2■□□□□ 0.5
COL11A2-201ENST00000341947 SYCP1Q15431 976 aa18.2■□□□□ 0.5
COL11A2-201ENST00000341947 PPP1R1BQ9UD71 204 aaPredicted RBP18.2■□□□□ 0.5
COL11A2-201ENST00000341947 PAF1Q8N7H5 531 aa18.2■□□□□ 0.5
COL11A2-201ENST00000341947 PRKAR2BP31323 418 aa18.2■□□□□ 0.5
COL11A2-201ENST00000341947 SMARCE1Q969G3 411 aa18.2■□□□□ 0.5
COL11A2-201ENST00000341947 ZNF396Q96N95 335 aaPredicted RBP18.2■□□□□ 0.5
COL11A2-201ENST00000341947 KINO60870 393 aaKnown RBP18.19■□□□□ 0.5
COL11A2-201ENST00000341947 CABP4P57796 275 aa18.19■□□□□ 0.5
COL11A2-201ENST00000341947 CCDC39Q9UFE4 941 aa18.19■□□□□ 0.5
COL11A2-201ENST00000341947 GNAI2P04899 355 aa18.18■□□□□ 0.5
COL11A2-201ENST00000341947 RUSC2Q8N2Y8 1516 aa18.18■□□□□ 0.5
COL11A2-201ENST00000341947 PIP4K2AP48426 406 aaPredicted RBP18.18■□□□□ 0.5
COL11A2-201ENST00000341947 TWISTNBQ3B726 338 aaPredicted RBP18.18■□□□□ 0.5
COL11A2-201ENST00000341947 TCP11L2Q8N4U5 519 aa18.18■□□□□ 0.5
COL11A2-201ENST00000341947 BRD4O60885 1362 aaPredicted RBP18.18■□□□□ 0.5
COL11A2-201ENST00000341947 PDCP20941 246 aa18.18■□□□□ 0.5
COL11A2-201ENST00000341947 ATP2B2Q01814 1243 aa18.17■□□□□ 0.5
COL11A2-201ENST00000341947 TTLL5Q6EMB2 1281 aa18.17■□□□□ 0.5
COL11A2-201ENST00000341947 FAM13BQ9NYF5 915 aa18.17■□□□□ 0.5
COL11A2-201ENST00000341947 SMC2O95347 1197 aa18.17■□□□□ 0.5
COL11A2-201ENST00000341947 ERCC4Q92889 916 aaPredicted RBP18.17■□□□□ 0.5
COL11A2-201ENST00000341947 PNISRQ8TF01 805 aaKnown RBP18.17■□□□□ 0.5
COL11A2-201ENST00000341947 MCM2P49736 904 aa18.17■□□□□ 0.5
COL11A2-201ENST00000341947 NACAP1Q9BZK3 213 aa18.16■□□□□ 0.5
COL11A2-201ENST00000341947 ADAMTS8Q9UP79 889 aa18.16■□□□□ 0.5
COL11A2-201ENST00000341947 SCAPERQ9BY12 1400 aa18.16■□□□□ 0.5
COL11A2-201ENST00000341947 PRAM1Q96QH2 718 aa18.16■□□□□ 0.5
COL11A2-201ENST00000341947 SPG7Q9UQ90 795 aa18.16■□□□□ 0.5
COL11A2-201ENST00000341947 TOM1L2Q6ZVM7 507 aa18.15■□□□□ 0.5
COL11A2-201ENST00000341947 FANCIQ9NVI1 1328 aa18.15■□□□□ 0.5
COL11A2-201ENST00000341947 FAM43AQ8N2R8 423 aa18.15■□□□□ 0.5
COL11A2-201ENST00000341947 DCTN1Q14203 1278 aa18.15■□□□□ 0.5
COL11A2-201ENST00000341947 STK38Q15208 465 aa18.15■□□□□ 0.5
COL11A2-201ENST00000341947 RAD54L2Q9Y4B4 1467 aa18.15■□□□□ 0.5
COL11A2-201ENST00000341947 EXOSC9Q06265 439 aaKnown RBP18.14■□□□□ 0.5
COL11A2-201ENST00000341947 TRIM5Q9C035 493 aa18.14■□□□□ 0.49
COL11A2-201ENST00000341947 CFAP70Q5T0N1 1121 aa18.14■□□□□ 0.49
COL11A2-201ENST00000341947 HDGFL1Q5TGJ6 251 aa18.14■□□□□ 0.49
COL11A2-201ENST00000341947 GCC1Q96CN9 775 aa18.14■□□□□ 0.49
COL11A2-201ENST00000341947 CCP110O43303 1012 aa18.14■□□□□ 0.49
COL11A2-201ENST00000341947 NEK4P51957 841 aa18.14■□□□□ 0.49
COL11A2-201ENST00000341947 NUTM2BA6NNL0 878 aaPredicted RBP18.14■□□□□ 0.49
COL11A2-201ENST00000341947 NUTM2EB1AL46 878 aaPredicted RBP18.14■□□□□ 0.49
COL11A2-201ENST00000341947 NUTM2AQ8IVF1 878 aaPredicted RBP18.14■□□□□ 0.49
COL11A2-201ENST00000341947 THEMISQ8N1K5 641 aaPredicted RBP18.13■□□□□ 0.49
COL11A2-201ENST00000341947 NOM1Q5C9Z4 860 aaKnown RBP18.13■□□□□ 0.49
COL11A2-201ENST00000341947 NASPP49321 788 aaPredicted RBP18.13■□□□□ 0.49
COL11A2-201ENST00000341947 JMYQ8N9B5 988 aa18.13■□□□□ 0.49
COL11A2-201ENST00000341947 DDX54Q8TDD1 881 aaKnown RBP18.13■□□□□ 0.49
COL11A2-201ENST00000341947 MBD3O95983 291 aa18.12■□□□□ 0.49
COL11A2-201ENST00000341947 TRIM22Q8IYM9 498 aa18.12■□□□□ 0.49
COL11A2-201ENST00000341947 CCT4P50991 539 aaKnown RBP18.12■□□□□ 0.49
COL11A2-201ENST00000341947 CCDC69A6NI79 296 aa18.12■□□□□ 0.49
COL11A2-201ENST00000341947 PPP2R1AP30153 589 aa18.12■□□□□ 0.49
COL11A2-201ENST00000341947 BRPF1P55201 1214 aaPredicted RBP18.12■□□□□ 0.49
COL11A2-201ENST00000341947 ZSCAN25Q6NSZ9 544 aa18.12■□□□□ 0.49
COL11A2-201ENST00000341947 IGF1RP08069 1367 aa18.12■□□□□ 0.49
COL11A2-201ENST00000341947 SLC4A2P04920 1241 aa18.12■□□□□ 0.49
COL11A2-201ENST00000341947 RABEP1Q15276 862 aa18.12■□□□□ 0.49
COL11A2-201ENST00000341947 RBM5P52756 815 aaKnown RBP eCLIP18.11■□□□□ 0.49
COL11A2-201ENST00000341947 ZNF692Q9BU19 519 aaPredicted RBP18.11■□□□□ 0.49
COL11A2-201ENST00000341947 TSPY26PQ9H489 355 aa18.11■□□□□ 0.49
COL11A2-201ENST00000341947 C1orf115Q9H7X2 142 aa18.11■□□□□ 0.49
COL11A2-201ENST00000341947 SOGA3Q5TF21 947 aa18.11■□□□□ 0.49
COL11A2-201ENST00000341947 ZNF530Q6P9A1 599 aaPredicted RBP18.11■□□□□ 0.49
COL11A2-201ENST00000341947 RNF214Q8ND24 703 aa18.11■□□□□ 0.49
COL11A2-201ENST00000341947 MPHOSPH8Q99549 860 aa18.1■□□□□ 0.49
COL11A2-201ENST00000341947 ANKRD1Q15327 319 aa18.1■□□□□ 0.49
COL11A2-201ENST00000341947 PDCL3Q9H2J4 239 aa18.1■□□□□ 0.49
COL11A2-201ENST00000341947 NOB1Q9ULX3 412 aaKnown RBP18.1■□□□□ 0.49
COL11A2-201ENST00000341947 CYP46A1Q9Y6A2 500 aa18.1■□□□□ 0.49
COL11A2-201ENST00000341947 FMNL2Q96PY5 1086 aa18.1■□□□□ 0.49
COL11A2-201ENST00000341947 ZNHIT6Q9NWK9 470 aaKnown RBP18.1■□□□□ 0.49
COL11A2-201ENST00000341947 MRE11P49959 708 aa18.09■□□□□ 0.49
COL11A2-201ENST00000341947 AFAP1Q8N556 730 aa18.09■□□□□ 0.49
COL11A2-201ENST00000341947 CDK19Q9BWU1 502 aa18.09■□□□□ 0.49
COL11A2-201ENST00000341947 SIL1Q9H173 461 aa18.09■□□□□ 0.49
COL11A2-201ENST00000341947 SULT6B1Q6IMI4 303 aa18.09■□□□□ 0.49
COL11A2-201ENST00000341947 BCL11BQ9C0K0 894 aaPredicted RBP18.09■□□□□ 0.49
COL11A2-201ENST00000341947 SYNJ2O15056 1496 aa18.09■□□□□ 0.49
COL11A2-201ENST00000341947 CEBPZQ03701 1054 aaKnown RBP18.09■□□□□ 0.49
COL11A2-201ENST00000341947 CCDC57Q2TAC2 916 aa18.09■□□□□ 0.49
COL11A2-201ENST00000341947 LRRCC1Q9C099 1032 aa18.09■□□□□ 0.49
COL11A2-201ENST00000341947 STIM1Q13586 685 aa18.09■□□□□ 0.49
COL11A2-201ENST00000341947 STK11IPQ8N1F8 1099 aa18.09■□□□□ 0.49
COL11A2-201ENST00000341947 SRCIN1Q9C0H9 1055 aa18.09■□□□□ 0.49
COL11A2-201ENST00000341947 NCOA2Q15596 1464 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms