RNA–Protein interactions for RNA: ENST00000341547.8

LMO7-202, Transcript of LIM domain 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO7, Length 7,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-202ENST00000341547 SAMD1Q6SPF0 538 aaPredicted RBP8.89□□□□□ -0.99
LMO7-202ENST00000341547 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.89□□□□□ -0.996e-8■■■■■ 173.4
LMO7-202ENST00000341547 RSPH4AQ5TD94 716 aa8.89□□□□□ -0.99
LMO7-202ENST00000341547 TRIM34Q9BYJ4 488 aa8.89□□□□□ -0.99
LMO7-202ENST00000341547 ERLIN1O75477 346 aa8.88□□□□□ -0.99
LMO7-202ENST00000341547 C1orf141Q5JVX7 400 aa8.88□□□□□ -0.99
LMO7-202ENST00000341547 AEBP1Q8IUX7 1158 aa8.88□□□□□ -0.99
LMO7-202ENST00000341547 PRIMPOLQ96LW4 560 aa8.88□□□□□ -0.99
LMO7-202ENST00000341547 ZHX1Q9UKY1 873 aaPredicted RBP8.88□□□□□ -0.99
LMO7-202ENST00000341547 MTMR7Q9Y216 660 aa8.88□□□□□ -0.99
LMO7-202ENST00000341547 WDR33Q9C0J8 1336 aaKnown RBP8.88□□□□□ -0.99
LMO7-202ENST00000341547 ERICH3Q5RHP9 1530 aa8.88□□□□□ -0.99
LMO7-202ENST00000341547 KIF2AO00139 706 aaPredicted RBP8.88□□□□□ -0.99
LMO7-202ENST00000341547 RALYLQ86SE5 291 aaKnown RBP8.88□□□□□ -0.99
LMO7-202ENST00000341547 VPS37DQ86XT2 251 aa8.87□□□□□ -0.99
LMO7-202ENST00000341547 STK11IPQ8N1F8 1099 aa8.87□□□□□ -0.99
LMO7-202ENST00000341547 ADAMTS8Q9UP79 889 aa8.87□□□□□ -0.99
LMO7-202ENST00000341547 SERPINC1P01008 464 aa8.87□□□□□ -0.99
LMO7-202ENST00000341547 SMAP1Q8IYB5 467 aaPredicted RBP8.87□□□□□ -0.99
LMO7-202ENST00000341547 TRERF1Q96PN7 1200 aa8.87□□□□□ -0.99
LMO7-202ENST00000341547 DNAJC2Q99543 621 aaKnown RBP8.87□□□□□ -0.99
LMO7-202ENST00000341547 FYB1O15117 783 aa8.87□□□□□ -0.99
LMO7-202ENST00000341547 PPP4R3BQ5MIZ7 849 aa8.87□□□□□ -0.99
LMO7-202ENST00000341547 AMOTL1Q8IY63 956 aa8.87□□□□□ -0.99
LMO7-202ENST00000341547 HMOX1P09601 288 aa8.87□□□□□ -0.99
LMO7-202ENST00000341547 IBSPP21815 317 aaPredicted RBP8.87□□□□□ -0.99
LMO7-202ENST00000341547 FILIP1LQ4L180 1135 aa8.86□□□□□ -0.99
LMO7-202ENST00000341547 SMARCE1Q969G3 411 aa8.86□□□□□ -0.99
LMO7-202ENST00000341547 MYO6Q9UM54 1294 aa8.86□□□□□ -0.99
LMO7-202ENST00000341547 GOLGA6L10A6NI86 522 aa8.86□□□□□ -0.99
LMO7-202ENST00000341547 XPCQ01831 940 aaPredicted RBP8.86□□□□□ -0.99
LMO7-202ENST00000341547 CCDC43Q96MW1 224 aaKnown RBP8.86□□□□□ -0.99
LMO7-202ENST00000341547 RBM25P49756 843 aaKnown RBP8.86□□□□□ -0.99
LMO7-202ENST00000341547 NBPF1Q3BBV0 1214 aa8.86□□□□□ -0.99
LMO7-202ENST00000341547 COG3Q96JB2 828 aa8.86□□□□□ -0.99
LMO7-202ENST00000341547 NEUROD6Q96NK8 337 aa8.86□□□□□ -0.99
LMO7-202ENST00000341547 NOL10Q9BSC4 688 aaKnown RBP8.86□□□□□ -0.99
LMO7-202ENST00000341547 CARMIL2Q6F5E8 1435 aa8.86□□□□□ -0.99
LMO7-202ENST00000341547 WASHC4Q2M389 1173 aa8.86□□□□□ -0.99
LMO7-202ENST00000341547 SCAPERQ9BY12 1400 aa8.85□□□□□ -0.99
LMO7-202ENST00000341547 ANKRD62A6NC57 917 aa8.85□□□□□ -0.99
LMO7-202ENST00000341547 ERC2O15083 957 aa8.85□□□□□ -0.99
LMO7-202ENST00000341547 PSMA5P28066 241 aa8.85□□□□□ -0.99
LMO7-202ENST00000341547 FYCO1Q9BQS8 1478 aa8.85□□□□□ -0.99
LMO7-202ENST00000341547 TIGD1Q96MW7 591 aa8.85□□□□□ -0.99
LMO7-202ENST00000341547 C1orf115Q9H7X2 142 aa8.85□□□□□ -0.99
LMO7-202ENST00000341547 ENOX2Q16206 610 aaKnown RBP8.85□□□□□ -0.99
LMO7-202ENST00000341547 TAX1BP1Q86VP1 789 aa8.85□□□□□ -0.99
LMO7-202ENST00000341547 CNKSR2Q8WXI2 1034 aa8.85□□□□□ -0.99
LMO7-202ENST00000341547 BBXQ8WY36 941 aaPredicted RBP8.85□□□□□ -0.99
LMO7-202ENST00000341547 TNMDQ9H2S6 317 aa8.85□□□□□ -0.99
LMO7-202ENST00000341547 LRRFIP2Q9Y608 721 aaKnown RBP8.85□□□□□ -0.99
LMO7-202ENST00000341547 CNTROBQ8N137 903 aa8.84□□□□□ -0.99
LMO7-202ENST00000341547 CCDC94Q9BW85 323 aaPredicted RBP8.84□□□□□ -0.99
LMO7-202ENST00000341547 DIAPH1O60610 1272 aaKnown RBP8.84□□□□□ -0.99
LMO7-202ENST00000341547 PDCP20941 246 aa8.84□□□□□ -0.99
LMO7-202ENST00000341547 GIMAP7Q8NHV1 300 aa8.84□□□□□ -0.99
LMO7-202ENST00000341547 DYDC1Q8WWB3 177 aa8.84□□□□□ -0.99
LMO7-202ENST00000341547 STK3Q13188 491 aa8.84□□□□□ -0.99
LMO7-202ENST00000341547 SEPT7Q16181 437 aaKnown RBP8.84□□□□□ -0.99
LMO7-202ENST00000341547 TMCO3Q6UWJ1 677 aa8.84□□□□□ -0.99
LMO7-202ENST00000341547 CCDC102AQ96A19 550 aa8.84□□□□□ -0.99
LMO7-202ENST00000341547 MAGEC2Q9UBF1 373 aaPredicted RBP8.84□□□□□ -0.99
LMO7-202ENST00000341547 CTDP1Q9Y5B0 961 aaPredicted RBP8.84□□□□□ -0.99
LMO7-202ENST00000341547 PPP2R1AP30153 589 aa8.84□□□□□ -0.99
LMO7-202ENST00000341547 GNAI1P63096 354 aa8.84□□□□□ -0.99
LMO7-202ENST00000341547 AIMP1Q12904 312 aaKnown RBP8.84□□□□□ -0.99
LMO7-202ENST00000341547 FILIP1Q7Z7B0 1213 aa8.84□□□□□ -0.99
LMO7-202ENST00000341547 FAM107BQ9H098 131 aa8.83□□□□□ -1
LMO7-202ENST00000341547 TSPYL4Q9UJ04 414 aa8.83□□□□□ -1
LMO7-202ENST00000341547 SYCE3A1L190 88 aa8.83□□□□□ -1
LMO7-202ENST00000341547 HSP90AB4PQ58FF6 505 aa8.83□□□□□ -1
LMO7-202ENST00000341547 SMARCA4P51532 1647 aa8.83□□□□□ -1
LMO7-202ENST00000341547 ARAP1Q96P48 1450 aa8.83□□□□□ -1
LMO7-202ENST00000341547 CCDC181Q5TID7 509 aa8.83□□□□□ -1
LMO7-202ENST00000341547 GPATCH11Q8N954 259 aa8.83□□□□□ -1
LMO7-202ENST00000341547 CBFA2T2O43439 604 aa8.83□□□□□ -1
LMO7-202ENST00000341547 BRMS1Q9HCU9 246 aa8.83□□□□□ -1
LMO7-202ENST00000341547 MINK1Q8N4C8 1332 aaPredicted RBP8.83□□□□□ -1
LMO7-202ENST00000341547 MVPQ14764 893 aaKnown RBP8.83□□□□□ -1
LMO7-202ENST00000341547 CCDC184Q52MB2 194 aa8.83□□□□□ -1
LMO7-202ENST00000341547 TBC1D2Q9BYX2 928 aa8.83□□□□□ -1
LMO7-202ENST00000341547 LRRCC1Q9C099 1032 aa8.83□□□□□ -1
LMO7-202ENST00000341547 ERLIN2O94905 339 aa8.82□□□□□ -1
LMO7-202ENST00000341547 DDX58O95786 925 aaKnown RBP8.82□□□□□ -1
LMO7-202ENST00000341547 UVSSAQ2YD98 709 aa8.82□□□□□ -1
LMO7-202ENST00000341547 ZNF428Q96B54 188 aa8.82□□□□□ -1
LMO7-202ENST00000341547 ZNF396Q96N95 335 aaPredicted RBP8.82□□□□□ -1
LMO7-202ENST00000341547 TRHP20396 242 aaPredicted RBP8.82□□□□□ -1
LMO7-202ENST00000341547 TNPO1Q92973 898 aaKnown RBP8.82□□□□□ -1
LMO7-202ENST00000341547 CASKIN1Q8WXD9 1431 aa8.82□□□□□ -1
LMO7-202ENST00000341547 BCAR3O75815 825 aa8.82□□□□□ -1
LMO7-202ENST00000341547 XRCC6P12956 609 aaKnown RBP eCLIP8.82□□□□□ -1
LMO7-202ENST00000341547 ME1P48163 572 aa8.82□□□□□ -1
LMO7-202ENST00000341547 EVC2Q86UK5 1308 aa8.82□□□□□ -1
LMO7-202ENST00000341547 PPFIBP1Q86W92 1011 aa8.82□□□□□ -1
LMO7-202ENST00000341547 TTC5Q8N0Z6 440 aa8.82□□□□□ -1
LMO7-202ENST00000341547 PLEKHH1Q9ULM0 1364 aa8.82□□□□□ -1
LMO7-202ENST00000341547 GOLGA6L7A0A1B0GV03 622 aa8.82□□□□□ -1
LMO7-202ENST00000341547 PDIA4P13667 645 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms