RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 PRAM1Q96QH2 718 aa9.31□□□□□ -0.92
ATP2B4-201ENST00000341360 CABP2Q9NPB3 220 aa9.31□□□□□ -0.92
ATP2B4-201ENST00000341360 CHMP5Q9NZZ3 219 aa9.31□□□□□ -0.92
ATP2B4-201ENST00000341360 NFXL1Q6ZNB6 911 aa9.31□□□□□ -0.92
ATP2B4-201ENST00000341360 ZSCAN25Q6NSZ9 544 aa9.3□□□□□ -0.92
ATP2B4-201ENST00000341360 CD109Q6YHK3 1445 aa9.3□□□□□ -0.92
ATP2B4-201ENST00000341360 NESP48681 1621 aa9.3□□□□□ -0.92
ATP2B4-201ENST00000341360 SMC3Q9UQE7 1217 aa9.3□□□□□ -0.92
ATP2B4-201ENST00000341360 DDX49Q9Y6V7 483 aaKnown RBP9.3□□□□□ -0.92
ATP2B4-201ENST00000341360 PTPRKQ15262 1439 aa9.3□□□□□ -0.92
ATP2B4-201ENST00000341360 GPS2Q13227 327 aa9.3□□□□□ -0.92
ATP2B4-201ENST00000341360 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.3□□□□□ -0.921e-6■■■■□ 20.5
ATP2B4-201ENST00000341360 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.3□□□□□ -0.92
ATP2B4-201ENST00000341360 A0A0U1RQG5 324 aaPredicted RBP9.29□□□□□ -0.92
ATP2B4-201ENST00000341360 CCDC73Q6ZRK6 1079 aa9.29□□□□□ -0.92
ATP2B4-201ENST00000341360 BCL2L13Q9BXK5 485 aa9.29□□□□□ -0.92
ATP2B4-201ENST00000341360 CCDC61Q9Y6R9 512 aa9.29□□□□□ -0.92
ATP2B4-201ENST00000341360 LRPPRCP42704 1394 aaKnown RBP9.29□□□□□ -0.92
ATP2B4-201ENST00000341360 ERBINQ96RT1 1412 aa9.29□□□□□ -0.92
ATP2B4-201ENST00000341360 C11orf95C9JLR9 678 aaPredicted RBP9.29□□□□□ -0.92
ATP2B4-201ENST00000341360 TCP11L2Q8N4U5 519 aa9.29□□□□□ -0.92
ATP2B4-201ENST00000341360 SRCIN1Q9C0H9 1055 aa9.29□□□□□ -0.92
ATP2B4-201ENST00000341360 PIP4K2AP48426 406 aaPredicted RBP9.29□□□□□ -0.92
ATP2B4-201ENST00000341360 MCTP1Q6DN14 999 aa9.29□□□□□ -0.92
ATP2B4-201ENST00000341360 RNF123Q5XPI4 1314 aa9.28□□□□□ -0.92
ATP2B4-201ENST00000341360 KIF21AQ7Z4S6 1674 aa9.28□□□□□ -0.92
ATP2B4-201ENST00000341360 PIP4K2BP78356 416 aa9.28□□□□□ -0.92
ATP2B4-201ENST00000341360 PPP2R1AP30153 589 aa9.28□□□□□ -0.92
ATP2B4-201ENST00000341360 TMEM132EQ6IEE7 984 aa9.28□□□□□ -0.92
ATP2B4-201ENST00000341360 KLHL34Q8N239 644 aa9.28□□□□□ -0.92
ATP2B4-201ENST00000341360 PRDM11Q9NQV5 511 aa9.28□□□□□ -0.92
ATP2B4-201ENST00000341360 KIF14Q15058 1648 aa9.28□□□□□ -0.92
ATP2B4-201ENST00000341360 ABCC11Q96J66 1382 aa9.28□□□□□ -0.92
ATP2B4-201ENST00000341360 FCHSD2O94868 740 aa9.28□□□□□ -0.92
ATP2B4-201ENST00000341360 GNAI2P04899 355 aa9.28□□□□□ -0.92
ATP2B4-201ENST00000341360 CDK19Q9BWU1 502 aa9.28□□□□□ -0.92
ATP2B4-201ENST00000341360 R3HCC1Q9Y3T6 440 aaKnown RBP9.28□□□□□ -0.92
ATP2B4-201ENST00000341360 PRKAR2BP31323 418 aa9.28□□□□□ -0.92
ATP2B4-201ENST00000341360 CCDC158Q5M9N0 1113 aa9.28□□□□□ -0.92
ATP2B4-201ENST00000341360 HMOX1P09601 288 aa9.27□□□□□ -0.93
ATP2B4-201ENST00000341360 CABP4P57796 275 aa9.27□□□□□ -0.93
ATP2B4-201ENST00000341360 IL27Q8NEV9 243 aa9.27□□□□□ -0.93
ATP2B4-201ENST00000341360 NACAP1Q9BZK3 213 aa9.27□□□□□ -0.93
ATP2B4-201ENST00000341360 GRIN2AQ12879 1464 aa9.27□□□□□ -0.93
ATP2B4-201ENST00000341360 PLB1Q6P1J6 1458 aa9.27□□□□□ -0.93
ATP2B4-201ENST00000341360 NEUROD6Q96NK8 337 aa9.27□□□□□ -0.93
ATP2B4-201ENST00000341360 PES1O00541 588 aaKnown RBP9.27□□□□□ -0.93
ATP2B4-201ENST00000341360 WASHC4Q2M389 1173 aa9.27□□□□□ -0.93
ATP2B4-201ENST00000341360 TWISTNBQ3B726 338 aaPredicted RBP9.27□□□□□ -0.93
ATP2B4-201ENST00000341360 FAM43AQ8N2R8 423 aa9.27□□□□□ -0.93
ATP2B4-201ENST00000341360 NAT10Q9H0A0 1025 aaKnown RBP9.27□□□□□ -0.93
ATP2B4-201ENST00000341360 ANKRD1Q15327 319 aa9.26□□□□□ -0.93
ATP2B4-201ENST00000341360 HDGFL1Q5TGJ6 251 aa9.26□□□□□ -0.93
ATP2B4-201ENST00000341360 ZNF530Q6P9A1 599 aaPredicted RBP9.26□□□□□ -0.93
ATP2B4-201ENST00000341360 TOM1L2Q6ZVM7 507 aa9.26□□□□□ -0.93
ATP2B4-201ENST00000341360 NOL8Q76FK4 1167 aaKnown RBP9.26□□□□□ -0.93
ATP2B4-201ENST00000341360 LETM1O95202 739 aaPredicted RBP9.26□□□□□ -0.93
ATP2B4-201ENST00000341360 RDXP35241 583 aaKnown RBP9.26□□□□□ -0.93
ATP2B4-201ENST00000341360 ABCC5O15440 1437 aa9.26□□□□□ -0.93
ATP2B4-201ENST00000341360 PLIN1O60240 522 aa9.26□□□□□ -0.93
ATP2B4-201ENST00000341360 AMOTQ4VCS5 1084 aa9.26□□□□□ -0.93
ATP2B4-201ENST00000341360 JMYQ8N9B5 988 aa9.26□□□□□ -0.93
ATP2B4-201ENST00000341360 BICD2Q8TD16 824 aa9.26□□□□□ -0.93
ATP2B4-201ENST00000341360 DENND4BO75064 1496 aaPredicted RBP9.26□□□□□ -0.93
ATP2B4-201ENST00000341360 FSD1Q9BTV5 496 aa9.25□□□□□ -0.93
ATP2B4-201ENST00000341360 NSD2O96028 1365 aa9.25□□□□□ -0.93
ATP2B4-201ENST00000341360 ADGRL1O94910 1474 aa9.25□□□□□ -0.93
ATP2B4-201ENST00000341360 GCC2Q8IWJ2 1684 aa9.25□□□□□ -0.93
ATP2B4-201ENST00000341360 TXLNAP40222 546 aa9.25□□□□□ -0.93
ATP2B4-201ENST00000341360 ZNF652Q9Y2D9 606 aa9.25□□□□□ -0.93
ATP2B4-201ENST00000341360 TEX14Q8IWB6 1497 aa9.25□□□□□ -0.93
ATP2B4-201ENST00000341360 SURF6O75683 361 aaKnown RBP9.25□□□□□ -0.93
ATP2B4-201ENST00000341360 FBXW7Q969H0 707 aa9.25□□□□□ -0.93
ATP2B4-201ENST00000341360 GZF1Q9H116 711 aaPredicted RBP9.25□□□□□ -0.93
ATP2B4-201ENST00000341360 MBD3O95983 291 aa9.24□□□□□ -0.93
ATP2B4-201ENST00000341360 CDR1P51861 262 aa9.24□□□□□ -0.93
ATP2B4-201ENST00000341360 CREBRFQ8IUR6 639 aa9.24□□□□□ -0.93
ATP2B4-201ENST00000341360 SASS6Q6UVJ0 657 aa9.24□□□□□ -0.93
ATP2B4-201ENST00000341360 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.24□□□□□ -0.93
ATP2B4-201ENST00000341360 INSRP06213 1382 aa9.24□□□□□ -0.93
ATP2B4-201ENST00000341360 STARD3NLO95772 234 aa9.24□□□□□ -0.93
ATP2B4-201ENST00000341360 RABEP1Q15276 862 aa9.24□□□□□ -0.93
ATP2B4-201ENST00000341360 AIMP1Q12904 312 aaKnown RBP9.23□□□□□ -0.93
ATP2B4-201ENST00000341360 CTNNA3Q9UI47 895 aa9.23□□□□□ -0.93
ATP2B4-201ENST00000341360 CABP1Q9NZU7 370 aa9.23□□□□□ -0.93
ATP2B4-201ENST00000341360 RALGAPBQ86X10 1494 aa9.23□□□□□ -0.93
ATP2B4-201ENST00000341360 CCDC27Q2M243 656 aa9.23□□□□□ -0.93
ATP2B4-201ENST00000341360 HSP90AB3PQ58FF7 597 aa9.23□□□□□ -0.93
ATP2B4-201ENST00000341360 WWC2Q6AWC2 1192 aa9.23□□□□□ -0.93
ATP2B4-201ENST00000341360 RBM42Q9BTD8 480 aaKnown RBP9.23□□□□□ -0.93
ATP2B4-201ENST00000341360 RAD21O60216 631 aa9.23□□□□□ -0.93
ATP2B4-201ENST00000341360 PRM3Q9NNZ6 103 aa9.23□□□□□ -0.93
ATP2B4-201ENST00000341360 CNNM1Q9NRU3 951 aa9.23□□□□□ -0.93
ATP2B4-201ENST00000341360 ADAMTS8Q9UP79 889 aa9.23□□□□□ -0.93
ATP2B4-201ENST00000341360 SULT6B1Q6IMI4 303 aa9.22□□□□□ -0.93
ATP2B4-201ENST00000341360 OLFM4Q6UX06 510 aa9.22□□□□□ -0.93
ATP2B4-201ENST00000341360 RPAP2Q8IXW5 612 aaPredicted RBP9.22□□□□□ -0.93
ATP2B4-201ENST00000341360 ZNF396Q96N95 335 aaPredicted RBP9.22□□□□□ -0.93
ATP2B4-201ENST00000341360 C22orf23Q9BZE7 217 aa9.22□□□□□ -0.93
ATP2B4-201ENST00000341360 ZNF287Q9HBT7 754 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms