RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 NLRP13Q86W25 1043 aa10.62□□□□□ -0.71
TMC1-202ENST00000340019 NGDNQ8NEJ9 315 aaKnown RBP10.62□□□□□ -0.71
TMC1-202ENST00000340019 PPP2R1AP30153 589 aa10.62□□□□□ -0.71
TMC1-202ENST00000340019 ORAI2Q96SN7 254 aa10.62□□□□□ -0.71
TMC1-202ENST00000340019 TTC21BQ7Z4L5 1316 aa10.62□□□□□ -0.71
TMC1-202ENST00000340019 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.61□□□□□ -0.71
TMC1-202ENST00000340019 GGNBP2Q9H3C7 697 aa10.61□□□□□ -0.71
TMC1-202ENST00000340019 MORC1Q86VD1 984 aa10.61□□□□□ -0.71
TMC1-202ENST00000340019 PIK3C2AO00443 1686 aa10.6□□□□□ -0.71
TMC1-202ENST00000340019 MRS2Q9HD23 443 aa10.6□□□□□ -0.71
TMC1-202ENST00000340019 USP54Q70EL1 1684 aa10.6□□□□□ -0.71
TMC1-202ENST00000340019 TTC21AQ8NDW8 1320 aa10.6□□□□□ -0.71
TMC1-202ENST00000340019 NME9Q86XW9 330 aa10.6□□□□□ -0.71
TMC1-202ENST00000340019 OVOS2A0A0J9YW53 1432 aa10.59□□□□□ -0.71
TMC1-202ENST00000340019 OVOS2Q6IE36 1432 aa10.59□□□□□ -0.71
TMC1-202ENST00000340019 TRPM3Q9HCF6 1732 aaPredicted RBP10.59□□□□□ -0.71
TMC1-202ENST00000340019 MARF1Q9Y4F3 1742 aaKnown RBP10.59□□□□□ -0.71
TMC1-202ENST00000340019 SCAF1Q9H7N4 1312 aaKnown RBP10.58□□□□□ -0.72
TMC1-202ENST00000340019 ZRANB1Q9UGI0 708 aa10.58□□□□□ -0.72
TMC1-202ENST00000340019 USP31Q70CQ4 1352 aa10.58□□□□□ -0.72
TMC1-202ENST00000340019 FOXO3O43524 673 aa10.57□□□□□ -0.72
TMC1-202ENST00000340019 PNISRQ8TF01 805 aaKnown RBP10.57□□□□□ -0.72
TMC1-202ENST00000340019 SLAIN2Q9P270 581 aa10.57□□□□□ -0.72
TMC1-202ENST00000340019 MAP2P11137 1827 aaKnown RBP10.57□□□□□ -0.72
TMC1-202ENST00000340019 PSME1Q06323 249 aa10.56□□□□□ -0.72
TMC1-202ENST00000340019 TNNT2P45379 298 aaPredicted RBP10.56□□□□□ -0.72
TMC1-202ENST00000340019 COG3Q96JB2 828 aa10.56□□□□□ -0.72
TMC1-202ENST00000340019 AATKQ6ZMQ8 1374 aa10.56□□□□□ -0.72
TMC1-202ENST00000340019 BRINP3Q76B58 766 aa10.56□□□□□ -0.72
TMC1-202ENST00000340019 ALS2Q96Q42 1657 aa10.55□□□□□ -0.72
TMC1-202ENST00000340019 PXDNQ92626 1479 aa10.55□□□□□ -0.72
TMC1-202ENST00000340019 SMG6Q86US8 1419 aaKnown RBP10.55□□□□□ -0.72
TMC1-202ENST00000340019 MTHFSP49914 203 aa10.54□□□□□ -0.72
TMC1-202ENST00000340019 KRT28Q7Z3Y7 464 aa10.54□□□□□ -0.72
TMC1-202ENST00000340019 SHPRHQ149N8 1683 aa10.54□□□□□ -0.72
TMC1-202ENST00000340019 NHSL1Q5SYE7 1610 aa10.54□□□□□ -0.72
TMC1-202ENST00000340019 NPHP3Q7Z494 1330 aa10.54□□□□□ -0.72
TMC1-202ENST00000340019 PAK3O75914 559 aaPredicted RBP10.53□□□□□ -0.72
TMC1-202ENST00000340019 XPCQ01831 940 aaPredicted RBP10.53□□□□□ -0.72
TMC1-202ENST00000340019 ABTB2Q8N961 1025 aa10.53□□□□□ -0.72
TMC1-202ENST00000340019 PNPLA6Q8IY17 1366 aa10.53□□□□□ -0.72
TMC1-202ENST00000340019 COL3A1P02461 1466 aaPredicted RBP10.53□□□□□ -0.72
TMC1-202ENST00000340019 FBLN1P23142 703 aa10.53□□□□□ -0.72
TMC1-202ENST00000340019 FAM9BQ8IZU0 186 aa10.53□□□□□ -0.72
TMC1-202ENST00000340019 DDX17Q92841 729 aaKnown RBP10.53□□□□□ -0.72
TMC1-202ENST00000340019 POLKQ9UBT6 870 aa10.53□□□□□ -0.72
TMC1-202ENST00000340019 SBNO1A3KN83 1393 aa10.53□□□□□ -0.72
TMC1-202ENST00000340019 INSRP06213 1382 aa10.52□□□□□ -0.73
TMC1-202ENST00000340019 NLRP6P59044 892 aa10.52□□□□□ -0.73
TMC1-202ENST00000340019 YTHDC1Q96MU7 727 aaKnown RBP10.52□□□□□ -0.73
TMC1-202ENST00000340019 ROBO1Q9Y6N7 1651 aa10.51□□□□□ -0.73
TMC1-202ENST00000340019 SLIT3O75094 1523 aa10.51□□□□□ -0.73
TMC1-202ENST00000340019 SOS2Q07890 1332 aaPredicted RBP10.51□□□□□ -0.73
TMC1-202ENST00000340019 IQSEC2Q5JU85 1478 aa10.51□□□□□ -0.73
TMC1-202ENST00000340019 CDK12Q9NYV4 1490 aaPredicted RBP10.51□□□□□ -0.73
TMC1-202ENST00000340019 PEAK1Q9H792 1746 aa10.51□□□□□ -0.73
TMC1-202ENST00000340019 NFAT5O94916 1531 aa10.5□□□□□ -0.73
TMC1-202ENST00000340019 TNS3Q68CZ2 1445 aa10.5□□□□□ -0.73
TMC1-202ENST00000340019 NUTM2GQ5VZR2 741 aa10.5□□□□□ -0.73
TMC1-202ENST00000340019 EMILIN1Q9Y6C2 1016 aa10.5□□□□□ -0.73
TMC1-202ENST00000340019 CRYBG1Q9Y4K1 1723 aa10.5□□□□□ -0.73
TMC1-202ENST00000340019 RRS1Q15050 365 aaKnown RBP10.49□□□□□ -0.73
TMC1-202ENST00000340019 USP19O94966 1318 aa10.49□□□□□ -0.73
TMC1-202ENST00000340019 SPATA31A3Q5VYP0 1347 aa10.49□□□□□ -0.73
TMC1-202ENST00000340019 CFAP53Q96M91 514 aa10.49□□□□□ -0.73
TMC1-202ENST00000340019 MED1Q15648 1581 aaPredicted RBP10.49□□□□□ -0.73
TMC1-202ENST00000340019 LTN1O94822 1766 aa10.49□□□□□ -0.73
TMC1-202ENST00000340019 AHDC1Q5TGY3 1603 aaPredicted RBP10.49□□□□□ -0.73
TMC1-202ENST00000340019 PHRF1Q9P1Y6 1649 aaKnown RBP10.49□□□□□ -0.73
TMC1-202ENST00000340019 BLMP54132 1417 aaPredicted RBP10.48□□□□□ -0.73
TMC1-202ENST00000340019 ADAMTS8Q9UP79 889 aa10.48□□□□□ -0.73
TMC1-202ENST00000340019 MAP3K19Q56UN5 1328 aa10.47□□□□□ -0.73
TMC1-202ENST00000340019 KIF24Q5T7B8 1368 aa10.47□□□□□ -0.73
TMC1-202ENST00000340019 WDR43Q15061 677 aaKnown RBP eCLIP10.47□□□□□ -0.73
TMC1-202ENST00000340019 KCNH5Q8NCM2 988 aa10.47□□□□□ -0.73
TMC1-202ENST00000340019 ARHGEF10O15013 1369 aa10.47□□□□□ -0.73
TMC1-202ENST00000340019 PPM1GO15355 546 aaPredicted RBP10.46□□□□□ -0.73
TMC1-202ENST00000340019 SOX12O15370 315 aa10.46□□□□□ -0.73
TMC1-202ENST00000340019 TOM1O60784 492 aa10.46□□□□□ -0.74
TMC1-202ENST00000340019 GCP02774 474 aa10.46□□□□□ -0.74
TMC1-202ENST00000340019 LMOD2Q6P5Q4 547 aa10.46□□□□□ -0.74
TMC1-202ENST00000340019 FLT4P35916 1363 aa10.45□□□□□ -0.74
TMC1-202ENST00000340019 DIAPH1O60610 1272 aaKnown RBP10.45□□□□□ -0.74
TMC1-202ENST00000340019 IL13P35225 146 aa10.45□□□□□ -0.74
TMC1-202ENST00000340019 HNRNPUQ00839 825 aaKnown RBP eCLIP10.45□□□□□ -0.74
TMC1-202ENST00000340019 ABCA3Q99758 1704 aa10.45□□□□□ -0.74
TMC1-202ENST00000340019 RGPD1P0DJD0 1748 aa10.44□□□□□ -0.74
TMC1-202ENST00000340019 RTL1A6NKG5 1358 aa10.44□□□□□ -0.74
TMC1-202ENST00000340019 CERKQ8TCT0 537 aa10.44□□□□□ -0.74
TMC1-202ENST00000340019 HSP90AB2PQ58FF8 381 aa10.44□□□□□ -0.74
TMC1-202ENST00000340019 NUDCQ9Y266 331 aa10.44□□□□□ -0.74
TMC1-202ENST00000340019 COL16A1Q07092 1604 aaPredicted RBP10.43□□□□□ -0.74
TMC1-202ENST00000340019 PHLPP1O60346 1717 aa10.43□□□□□ -0.74
TMC1-202ENST00000340019 HOXC9P31274 260 aa10.43□□□□□ -0.74
TMC1-202ENST00000340019 ARHGEF25Q86VW2 580 aa10.43□□□□□ -0.74
TMC1-202ENST00000340019 EIF4A2Q14240 407 aaKnown RBP10.42□□□□□ -0.74
TMC1-202ENST00000340019 COL22A1Q8NFW1 1626 aaPredicted RBP10.42□□□□□ -0.74
TMC1-202ENST00000340019 COL18A1P39060 1754 aa10.42□□□□□ -0.74
TMC1-202ENST00000340019 AMPHP49418 695 aa10.42□□□□□ -0.74
TMC1-202ENST00000340019 PELP1Q8IZL8 1130 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms