RNA–Protein interactions for RNA: ENST00000339420.6

ZDHHC3-202, Transcript of zinc finger DHHC-type containing 3, humanhuman

TSL 2

Gene ZDHHC3, Length 3,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3-202ENST00000339420 ARAP3Q8WWN8 1544 aa12.81□□□□□ -0.36
ZDHHC3-202ENST00000339420 SYCP2Q9BX26 1530 aa12.81□□□□□ -0.36
ZDHHC3-202ENST00000339420 ERCC6L2Q5T890 1561 aa12.8□□□□□ -0.36
ZDHHC3-202ENST00000339420 TMEM132EQ6IEE7 984 aa12.8□□□□□ -0.36
ZDHHC3-202ENST00000339420 NOL8Q76FK4 1167 aaKnown RBP12.8□□□□□ -0.36
ZDHHC3-202ENST00000339420 PPP1R9BQ96SB3 815 aa12.8□□□□□ -0.36
ZDHHC3-202ENST00000339420 SCAF11Q99590 1463 aaKnown RBP12.79□□□□□ -0.36
ZDHHC3-202ENST00000339420 ADGRF5Q8IZF2 1346 aa12.79□□□□□ -0.36
ZDHHC3-202ENST00000339420 SNX21Q969T3 373 aa12.79□□□□□ -0.36
ZDHHC3-202ENST00000339420 CIZ1Q9ULV3 898 aaPredicted RBP12.79□□□□□ -0.36
ZDHHC3-202ENST00000339420 SYCE3A1L190 88 aa12.79□□□□□ -0.36
ZDHHC3-202ENST00000339420 HDAC1Q13547 482 aaPredicted RBP12.79□□□□□ -0.36
ZDHHC3-202ENST00000339420 KLHL40Q2TBA0 621 aa12.79□□□□□ -0.36
ZDHHC3-202ENST00000339420 RSPH4AQ5TD94 716 aa12.79□□□□□ -0.36
ZDHHC3-202ENST00000339420 AAMPQ13685 434 aa12.79□□□□□ -0.36
ZDHHC3-202ENST00000339420 NGEFQ8N5V2 710 aa12.79□□□□□ -0.36
ZDHHC3-202ENST00000339420 PRDM4Q9UKN5 801 aa12.79□□□□□ -0.36
ZDHHC3-202ENST00000339420 NUCB1Q02818 461 aa12.78□□□□□ -0.36
ZDHHC3-202ENST00000339420 ARHGAP5Q13017 1502 aa12.78□□□□□ -0.36
ZDHHC3-202ENST00000339420 ZGPATQ8N5A5 531 aaKnown RBP12.77□□□□□ -0.36
ZDHHC3-202ENST00000339420 ZBTB40Q9NUA8 1239 aa12.77□□□□□ -0.37
ZDHHC3-202ENST00000339420 ABCC1P33527 1531 aa12.77□□□□□ -0.37
ZDHHC3-202ENST00000339420 DUOX2Q9NRD8 1548 aa12.76□□□□□ -0.37
ZDHHC3-202ENST00000339420 ZNF830Q96NB3 372 aaPredicted RBP12.76□□□□□ -0.37
ZDHHC3-202ENST00000339420 THUMPD2Q9BTF0 503 aaKnown RBP12.76□□□□□ -0.37
ZDHHC3-202ENST00000339420 POLR3AO14802 1390 aaPredicted RBP12.76□□□□□ -0.37
ZDHHC3-202ENST00000339420 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.75□□□□□ -0.37
ZDHHC3-202ENST00000339420 AK9Q5TCS8 1911 aa12.75□□□□□ -0.37
ZDHHC3-202ENST00000339420 PLCB2Q00722 1185 aa12.75□□□□□ -0.37
ZDHHC3-202ENST00000339420 C17orf53Q8N3J3 647 aaPredicted RBP12.75□□□□□ -0.37
ZDHHC3-202ENST00000339420 NSFL1CQ9UNZ2 370 aaKnown RBP12.75□□□□□ -0.37
ZDHHC3-202ENST00000339420 NCOA3Q9Y6Q9 1424 aa12.75□□□□□ -0.37
ZDHHC3-202ENST00000339420 AFAP1Q8N556 730 aa12.75□□□□□ -0.37
ZDHHC3-202ENST00000339420 GGNBP2Q9H3C7 697 aa12.75□□□□□ -0.37
ZDHHC3-202ENST00000339420 EIF2AK4Q9P2K8 1649 aaKnown RBP12.75□□□□□ -0.37
ZDHHC3-202ENST00000339420 NOL7Q9UMY1 257 aaKnown RBP12.74□□□□□ -0.37
ZDHHC3-202ENST00000339420 BMP2KLQ5H9B9 411 aa12.74□□□□□ -0.37
ZDHHC3-202ENST00000339420 SYNMO15061 1565 aa12.74□□□□□ -0.37
ZDHHC3-202ENST00000339420 NPC1L1Q9UHC9 1359 aa12.74□□□□□ -0.37
ZDHHC3-202ENST00000339420 CBX1P83916 185 aa12.73□□□□□ -0.37
ZDHHC3-202ENST00000339420 LMBRD1Q9NUN5 540 aa12.73□□□□□ -0.37
ZDHHC3-202ENST00000339420 KIF16BQ96L93 1317 aa12.73□□□□□ -0.37
ZDHHC3-202ENST00000339420 ATAD2Q6PL18 1390 aa12.73□□□□□ -0.37
ZDHHC3-202ENST00000339420 PTMSP20962 102 aa12.73□□□□□ -0.37
ZDHHC3-202ENST00000339420 TMPOP42166 694 aaKnown RBP12.73□□□□□ -0.37
ZDHHC3-202ENST00000339420 C16orf71Q8IYS4 520 aaPredicted RBP12.73□□□□□ -0.37
ZDHHC3-202ENST00000339420 GPT2Q8TD30 523 aa12.73□□□□□ -0.37
ZDHHC3-202ENST00000339420 ATP10AO60312 1499 aa12.73□□□□□ -0.37
ZDHHC3-202ENST00000339420 IGSF3O75054 1194 aa12.73□□□□□ -0.37
ZDHHC3-202ENST00000339420 PHF23Q9BUL5 403 aaPredicted RBP12.72□□□□□ -0.37
ZDHHC3-202ENST00000339420 BCL11BQ9C0K0 894 aaPredicted RBP12.72□□□□□ -0.37
ZDHHC3-202ENST00000339420 ZKSCAN5Q9Y2L8 839 aa12.72□□□□□ -0.37
ZDHHC3-202ENST00000339420 DEPDC5O75140 1603 aa12.72□□□□□ -0.37
ZDHHC3-202ENST00000339420 IPO8O15397 1037 aaKnown RBP12.72□□□□□ -0.37
ZDHHC3-202ENST00000339420 FBLN1P23142 703 aa12.72□□□□□ -0.37
ZDHHC3-202ENST00000339420 GDPD2Q9HCC8 539 aa12.72□□□□□ -0.37
ZDHHC3-202ENST00000339420 TMEM63CQ9P1W3 806 aa12.72□□□□□ -0.37
ZDHHC3-202ENST00000339420 RNF17Q9BXT8 1623 aaKnown RBP12.72□□□□□ -0.37
ZDHHC3-202ENST00000339420 CABP2Q9NPB3 220 aa12.71□□□□□ -0.37
ZDHHC3-202ENST00000339420 ZMYM3Q14202 1370 aa12.71□□□□□ -0.37
ZDHHC3-202ENST00000339420 ERVK-7P63135 1459 aa12.71□□□□□ -0.37
ZDHHC3-202ENST00000339420 KIF3BO15066 747 aa12.71□□□□□ -0.37
ZDHHC3-202ENST00000339420 ABCA9Q8IUA7 1624 aa12.71□□□□□ -0.37
ZDHHC3-202ENST00000339420 OTUD7AQ8TE49 926 aaPredicted RBP12.71□□□□□ -0.38
ZDHHC3-202ENST00000339420 TRIM35Q9UPQ4 493 aa12.71□□□□□ -0.38
ZDHHC3-202ENST00000339420 PLCH2O75038 1416 aa12.71□□□□□ -0.38
ZDHHC3-202ENST00000339420 CDC45O75419 566 aa12.7□□□□□ -0.38
ZDHHC3-202ENST00000339420 ZNF445P59923 1031 aa12.69□□□□□ -0.38
ZDHHC3-202ENST00000339420 MAP7D2Q96T17 732 aa12.69□□□□□ -0.38
ZDHHC3-202ENST00000339420 SPDYE4A6NLX3 237 aa12.69□□□□□ -0.38
ZDHHC3-202ENST00000339420 SMARCA5O60264 1052 aaPredicted RBP12.69□□□□□ -0.38
ZDHHC3-202ENST00000339420 GSPT1P15170 499 aaKnown RBP12.69□□□□□ -0.38
ZDHHC3-202ENST00000339420 NUCB2P80303 420 aa12.69□□□□□ -0.38
ZDHHC3-202ENST00000339420 ZNF500O60304 480 aaPredicted RBP12.68□□□□□ -0.38
ZDHHC3-202ENST00000339420 STK26Q9P289 416 aa12.68□□□□□ -0.38
ZDHHC3-202ENST00000339420 DTNBO60941 627 aa12.68□□□□□ -0.38
ZDHHC3-202ENST00000339420 SASS6Q6UVJ0 657 aa12.68□□□□□ -0.38
ZDHHC3-202ENST00000339420 INO80Q9ULG1 1556 aaPredicted RBP12.68□□□□□ -0.38
ZDHHC3-202ENST00000339420 CEP152O94986 1710 aa12.68□□□□□ -0.38
ZDHHC3-202ENST00000339420 CCDC27Q2M243 656 aa12.67□□□□□ -0.38
ZDHHC3-202ENST00000339420 TSPYL6Q8N831 410 aa12.67□□□□□ -0.38
ZDHHC3-202ENST00000339420 ZFYVE16Q7Z3T8 1539 aa12.67□□□□□ -0.38
ZDHHC3-202ENST00000339420 DYNC1I1O14576 645 aa12.67□□□□□ -0.38
ZDHHC3-202ENST00000339420 HMOX1P09601 288 aa12.67□□□□□ -0.38
ZDHHC3-202ENST00000339420 SIRT2Q8IXJ6 389 aa12.67□□□□□ -0.38
ZDHHC3-202ENST00000339420 TTC12Q9H892 705 aaPredicted RBP12.67□□□□□ -0.38
ZDHHC3-202ENST00000339420 CCDC39Q9UFE4 941 aa12.67□□□□□ -0.38
ZDHHC3-202ENST00000339420 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.67□□□□□ -0.388e-6■□□□□ 8.6
ZDHHC3-202ENST00000339420 SPAG9O60271 1321 aaKnown RBP12.66□□□□□ -0.38
ZDHHC3-202ENST00000339420 RABEP1Q15276 862 aa12.66□□□□□ -0.38
ZDHHC3-202ENST00000339420 CSPP1Q1MSJ5 1256 aa12.66□□□□□ -0.38
ZDHHC3-202ENST00000339420 NEURL4Q96JN8 1562 aa12.66□□□□□ -0.38
ZDHHC3-202ENST00000339420 MYOM1P52179 1685 aa12.66□□□□□ -0.38
ZDHHC3-202ENST00000339420 PPIP5K1Q6PFW1 1433 aa12.66□□□□□ -0.38
ZDHHC3-202ENST00000339420 SCAPERQ9BY12 1400 aa12.66□□□□□ -0.38
ZDHHC3-202ENST00000339420 MADDQ8WXG6 1647 aa12.66□□□□□ -0.38
ZDHHC3-202ENST00000339420 KIAA2012Q0VF49 1180 aa12.66□□□□□ -0.38
ZDHHC3-202ENST00000339420 PDLIM2Q96JY6 352 aa12.66□□□□□ -0.38
ZDHHC3-202ENST00000339420 SRPK2P78362 688 aaKnown RBP12.65□□□□□ -0.38
ZDHHC3-202ENST00000339420 LRSAM1Q6UWE0 723 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms