RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 PLEKHF1Q96S99 279 aa16.95■□□□□ 0.3
CDK5RAP1-201ENST00000339269 ATP7BP35670 1465 aa16.94■□□□□ 0.3
CDK5RAP1-201ENST00000339269 TXNDC2Q86VQ3 553 aa16.94■□□□□ 0.3
CDK5RAP1-201ENST00000339269 EID1Q9Y6B2 187 aa16.94■□□□□ 0.3
CDK5RAP1-201ENST00000339269 TECPR2O15040 1411 aa16.94■□□□□ 0.3
CDK5RAP1-201ENST00000339269 LTKP29376 864 aa16.93■□□□□ 0.3
CDK5RAP1-201ENST00000339269 WDR63Q8IWG1 891 aa16.93■□□□□ 0.3
CDK5RAP1-201ENST00000339269 KIF20BQ96Q89 1820 aa16.93■□□□□ 0.3
CDK5RAP1-201ENST00000339269 MS4A1P11836 297 aa16.93■□□□□ 0.3
CDK5RAP1-201ENST00000339269 NEUROD2Q15784 382 aa16.93■□□□□ 0.3
CDK5RAP1-201ENST00000339269 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP1-201ENST00000339269 KNDC1Q76NI1 1749 aa16.92■□□□□ 0.3
CDK5RAP1-201ENST00000339269 NPHP4O75161 1426 aaPredicted RBP16.91■□□□□ 0.3
CDK5RAP1-201ENST00000339269 CPSF1Q10570 1443 aaKnown RBP16.91■□□□□ 0.3
CDK5RAP1-201ENST00000339269 U2AF1L5P0DN76 240 aaPredicted RBP16.91■□□□□ 0.3
CDK5RAP1-201ENST00000339269 U2AF1Q01081 240 aaKnown RBP eCLIP16.91■□□□□ 0.3
CDK5RAP1-201ENST00000339269 CDC42BPGQ6DT37 1551 aa16.91■□□□□ 0.3
CDK5RAP1-201ENST00000339269 BACH2Q9BYV9 841 aa16.9■□□□□ 0.3
CDK5RAP1-201ENST00000339269 CPS1P31327 1500 aa16.9■□□□□ 0.3
CDK5RAP1-201ENST00000339269 PDE4AP27815 886 aa16.9■□□□□ 0.3
CDK5RAP1-201ENST00000339269 HDGFL2Q7Z4V5 671 aaPredicted RBP16.9■□□□□ 0.3
CDK5RAP1-201ENST00000339269 RARSP54136 660 aaKnown RBP16.89■□□□□ 0.29
CDK5RAP1-201ENST00000339269 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.89■□□□□ 0.29
CDK5RAP1-201ENST00000339269 FAM135BQ49AJ0 1406 aa16.89■□□□□ 0.29
CDK5RAP1-201ENST00000339269 CENPQQ7L2Z9 268 aaPredicted RBP16.88■□□□□ 0.29
CDK5RAP1-201ENST00000339269 ADAMTS13Q76LX8 1427 aa16.88■□□□□ 0.29
CDK5RAP1-201ENST00000339269 HDGFP51858 240 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP1-201ENST00000339269 WASLO00401 505 aaPredicted RBP16.87■□□□□ 0.29
CDK5RAP1-201ENST00000339269 PDE3AQ14432 1141 aa16.87■□□□□ 0.29
CDK5RAP1-201ENST00000339269 TRIM35Q9UPQ4 493 aa16.87■□□□□ 0.29
CDK5RAP1-201ENST00000339269 PAK3O75914 559 aaPredicted RBP16.86■□□□□ 0.29
CDK5RAP1-201ENST00000339269 SIRT1Q96EB6 747 aa16.86■□□□□ 0.29
CDK5RAP1-201ENST00000339269 FBLN1P23142 703 aa16.86■□□□□ 0.29
CDK5RAP1-201ENST00000339269 BCL11AQ9H165 835 aa16.86■□□□□ 0.29
CDK5RAP1-201ENST00000339269 TNNQ9UQP3 1299 aa16.86■□□□□ 0.29
CDK5RAP1-201ENST00000339269 PPIP5K1Q6PFW1 1433 aa16.85■□□□□ 0.29
CDK5RAP1-201ENST00000339269 TMPOP42166 694 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP1-201ENST00000339269 PANK1Q8TE04 598 aa16.85■□□□□ 0.29
CDK5RAP1-201ENST00000339269 ROBO2Q9HCK4 1378 aa16.85■□□□□ 0.29
CDK5RAP1-201ENST00000339269 EDC4Q6P2E9 1401 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP1-201ENST00000339269 POLKQ9UBT6 870 aa16.84■□□□□ 0.29
CDK5RAP1-201ENST00000339269 RLBP1P12271 317 aa16.84■□□□□ 0.29
CDK5RAP1-201ENST00000339269 PRR36Q9H6K5 1346 aa16.84■□□□□ 0.29
CDK5RAP1-201ENST00000339269 LRRC7Q96NW7 1537 aa16.83■□□□□ 0.29
CDK5RAP1-201ENST00000339269 U2SURPO15042 1029 aaKnown RBP16.83■□□□□ 0.28
CDK5RAP1-201ENST00000339269 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.83■□□□□ 0.282e-6■■■□□ 15.6
CDK5RAP1-201ENST00000339269 MON2Q7Z3U7 1717 aa16.83■□□□□ 0.28
CDK5RAP1-201ENST00000339269 IPO9Q96P70 1041 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP1-201ENST00000339269 PLEKHG1Q9ULL1 1385 aa16.82■□□□□ 0.28
CDK5RAP1-201ENST00000339269 ZNF335Q9H4Z2 1342 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP1-201ENST00000339269 DIAPH1O60610 1272 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP1-201ENST00000339269 IGHDP01880 384 aa16.82■□□□□ 0.28
CDK5RAP1-201ENST00000339269 ZRANB1Q9UGI0 708 aa16.82■□□□□ 0.28
CDK5RAP1-201ENST00000339269 NOP58Q9Y2X3 529 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP1-201ENST00000339269 NUDT16Q96DE0 195 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP1-201ENST00000339269 SLC26A8Q96RN1 970 aa16.81■□□□□ 0.28
CDK5RAP1-201ENST00000339269 STRCP1A6NGW2 1772 aa16.81■□□□□ 0.28
CDK5RAP1-201ENST00000339269 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP1-201ENST00000339269 NME9Q86XW9 330 aa16.8■□□□□ 0.28
CDK5RAP1-201ENST00000339269 TSR2Q969E8 191 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP1-201ENST00000339269 COG6Q9Y2V7 657 aa16.8■□□□□ 0.28
CDK5RAP1-201ENST00000339269 RSPH6AQ9H0K4 717 aa16.8■□□□□ 0.28
CDK5RAP1-201ENST00000339269 MYH16Q9H6N6 1097 aa16.8■□□□□ 0.28
CDK5RAP1-201ENST00000339269 AKAP12Q02952 1782 aa16.79■□□□□ 0.28
CDK5RAP1-201ENST00000339269 PTPRUQ92729 1446 aa16.79■□□□□ 0.28
CDK5RAP1-201ENST00000339269 ANP32AP39687 249 aaKnown RBP16.79■□□□□ 0.28
CDK5RAP1-201ENST00000339269 BCL2L13Q9BXK5 485 aa16.79■□□□□ 0.28
CDK5RAP1-201ENST00000339269 LTBP4Q8N2S1 1624 aa16.79■□□□□ 0.28
CDK5RAP1-201ENST00000339269 CLUAP1Q96AJ1 413 aa16.78■□□□□ 0.28
CDK5RAP1-201ENST00000339269 AATKQ6ZMQ8 1374 aa16.78■□□□□ 0.28
CDK5RAP1-201ENST00000339269 IL16Q14005 1332 aa16.78■□□□□ 0.28
CDK5RAP1-201ENST00000339269 CDK12Q9NYV4 1490 aaPredicted RBP16.78■□□□□ 0.28
CDK5RAP1-201ENST00000339269 EMILIN1Q9Y6C2 1016 aa16.78■□□□□ 0.28
CDK5RAP1-201ENST00000339269 TOPAZ1Q8N9V7 1692 aa16.77■□□□□ 0.28
CDK5RAP1-201ENST00000339269 CHD2O14647 1828 aaKnown RBP16.77■□□□□ 0.28
CDK5RAP1-201ENST00000339269 FRAT1Q92837 279 aaPredicted RBP16.77■□□□□ 0.27
CDK5RAP1-201ENST00000339269 CCDC61Q9Y6R9 512 aa16.77■□□□□ 0.27
CDK5RAP1-201ENST00000339269 NRKQ7Z2Y5 1582 aa16.77■□□□□ 0.27
CDK5RAP1-201ENST00000339269 MAP2P11137 1827 aaKnown RBP16.77■□□□□ 0.27
CDK5RAP1-201ENST00000339269 DIP2AQ14689 1571 aa16.76■□□□□ 0.27
CDK5RAP1-201ENST00000339269 C8orf34Q49A92 452 aa16.76■□□□□ 0.27
CDK5RAP1-201ENST00000339269 FCHSD2O94868 740 aa16.76■□□□□ 0.27
CDK5RAP1-201ENST00000339269 IL13P35225 146 aa16.76■□□□□ 0.27
CDK5RAP1-201ENST00000339269 EXOSC9Q06265 439 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP1-201ENST00000339269 MAPK8IP3Q9UPT6 1336 aa16.75■□□□□ 0.27
CDK5RAP1-201ENST00000339269 RIPK4P57078 832 aa16.75■□□□□ 0.27
CDK5RAP1-201ENST00000339269 CT47B1P0C2W7 299 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP1-201ENST00000339269 PCDHB15Q9Y5E8 787 aa16.74■□□□□ 0.27
CDK5RAP1-201ENST00000339269 CANXP27824 592 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP1-201ENST00000339269 PRKAR2BP31323 418 aa16.73■□□□□ 0.27
CDK5RAP1-201ENST00000339269 PHACTR3Q96KR7 559 aa16.73■□□□□ 0.27
CDK5RAP1-201ENST00000339269 ITSN1Q15811 1721 aa16.73■□□□□ 0.27
CDK5RAP1-201ENST00000339269 NPM2Q86SE8 214 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP1-201ENST00000339269 TBX22Q9Y458 520 aa16.72■□□□□ 0.27
CDK5RAP1-201ENST00000339269 CERKQ8TCT0 537 aa16.71■□□□□ 0.27
CDK5RAP1-201ENST00000339269 SSH1Q8WYL5 1049 aa16.71■□□□□ 0.27
CDK5RAP1-201ENST00000339269 PPM1GO15355 546 aaPredicted RBP16.71■□□□□ 0.27
CDK5RAP1-201ENST00000339269 DAXXQ9UER7 740 aaPredicted RBP16.71■□□□□ 0.27
CDK5RAP1-201ENST00000339269 OVOS2A0A0J9YW53 1432 aa16.71■□□□□ 0.27
CDK5RAP1-201ENST00000339269 OVOS2Q6IE36 1432 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms