RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 NINLQ9Y2I6 1382 aa14.7□□□□□ -0.06
LRP1-202ENST00000338962 NUTM2FA1L443 756 aa14.7□□□□□ -0.06
LRP1-202ENST00000338962 ATP7BP35670 1465 aa14.7□□□□□ -0.06
LRP1-202ENST00000338962 SOCS7O14512 581 aa14.7□□□□□ -0.06
LRP1-202ENST00000338962 USP32Q8NFA0 1604 aa14.69□□□□□ -0.06
LRP1-202ENST00000338962 PLEKHG3A1L390 1219 aa14.69□□□□□ -0.06
LRP1-202ENST00000338962 UBAP1LF5GYI3 381 aa14.69□□□□□ -0.06
LRP1-202ENST00000338962 MORC1Q86VD1 984 aa14.69□□□□□ -0.06
LRP1-202ENST00000338962 ORAI2Q96SN7 254 aa14.68□□□□□ -0.06
LRP1-202ENST00000338962 PPP4R2Q9NY27 417 aa14.68□□□□□ -0.06
LRP1-202ENST00000338962 FMN2Q9NZ56 1722 aa14.68□□□□□ -0.06
LRP1-202ENST00000338962 ESCO1Q5FWF5 840 aa14.68□□□□□ -0.06
LRP1-202ENST00000338962 BRINP3Q76B58 766 aa14.68□□□□□ -0.06
LRP1-202ENST00000338962 RNF123Q5XPI4 1314 aa14.68□□□□□ -0.06
LRP1-202ENST00000338962 CABP1Q9NZU7 370 aa14.67□□□□□ -0.06
LRP1-202ENST00000338962 PHF8Q9UPP1 1060 aa14.66□□□□□ -0.06
LRP1-202ENST00000338962 NSD2O96028 1365 aa14.66□□□□□ -0.06
LRP1-202ENST00000338962 ILDR2Q71H61 639 aa14.66□□□□□ -0.06
LRP1-202ENST00000338962 POLR3AO14802 1390 aaPredicted RBP14.65□□□□□ -0.06
LRP1-202ENST00000338962 PPIP5K1Q6PFW1 1433 aa14.64□□□□□ -0.07
LRP1-202ENST00000338962 A0A1W2PP64 1363 aa14.64□□□□□ -0.07
LRP1-202ENST00000338962 TNNT2P45379 298 aaPredicted RBP14.64□□□□□ -0.07
LRP1-202ENST00000338962 CDCA7LQ96GN5 454 aa14.64□□□□□ -0.07
LRP1-202ENST00000338962 TERF2IPQ9NYB0 399 aa14.64□□□□□ -0.07
LRP1-202ENST00000338962 PMFBP1Q8TBY8 1022 aa14.63□□□□□ -0.07
LRP1-202ENST00000338962 TSHZ2Q9NRE2 1034 aa14.63□□□□□ -0.07
LRP1-202ENST00000338962 RCAN3Q9UKA8 241 aa14.63□□□□□ -0.07
LRP1-202ENST00000338962 ZNF692Q9BU19 519 aaPredicted RBP14.63□□□□□ -0.07
LRP1-202ENST00000338962 ACEP12821 1306 aa14.62□□□□□ -0.07
LRP1-202ENST00000338962 FOXO3O43524 673 aa14.62□□□□□ -0.07
LRP1-202ENST00000338962 PIP4K2BP78356 416 aa14.62□□□□□ -0.07
LRP1-202ENST00000338962 CPSF1Q10570 1443 aaKnown RBP14.61□□□□□ -0.07
LRP1-202ENST00000338962 NPHP3Q7Z494 1330 aa14.61□□□□□ -0.07
LRP1-202ENST00000338962 CCDC146Q8IYE0 955 aa14.61□□□□□ -0.07
LRP1-202ENST00000338962 NGDNQ8NEJ9 315 aaKnown RBP14.61□□□□□ -0.07
LRP1-202ENST00000338962 CD163L1Q9NR16 1453 aa14.6□□□□□ -0.07
LRP1-202ENST00000338962 RRP1P56182 461 aaKnown RBP14.6□□□□□ -0.07
LRP1-202ENST00000338962 ANP32EQ9BTT0 268 aa14.6□□□□□ -0.07
LRP1-202ENST00000338962 TOPAZ1Q8N9V7 1692 aa14.6□□□□□ -0.07
LRP1-202ENST00000338962 SOS2Q07890 1332 aaPredicted RBP14.59□□□□□ -0.07
LRP1-202ENST00000338962 HDGFL2Q7Z4V5 671 aaPredicted RBP14.59□□□□□ -0.07
LRP1-202ENST00000338962 CFAP53Q96M91 514 aa14.59□□□□□ -0.07
LRP1-202ENST00000338962 MTHFSP49914 203 aa14.58□□□□□ -0.07
LRP1-202ENST00000338962 B4GALNT3Q6L9W6 998 aa14.58□□□□□ -0.07
LRP1-202ENST00000338962 APAF1O14727 1248 aa14.58□□□□□ -0.08
LRP1-202ENST00000338962 PRKCSHP14314 528 aaPredicted RBP14.58□□□□□ -0.08
LRP1-202ENST00000338962 PSME1Q06323 249 aa14.58□□□□□ -0.08
LRP1-202ENST00000338962 ZNF521Q96K83 1311 aa14.58□□□□□ -0.08
LRP1-202ENST00000338962 GOLGA2Q08379 1002 aa14.57□□□□□ -0.08
LRP1-202ENST00000338962 KRT28Q7Z3Y7 464 aa14.57□□□□□ -0.08
LRP1-202ENST00000338962 DDX17Q92841 729 aaKnown RBP14.57□□□□□ -0.08
LRP1-202ENST00000338962 NGEFQ8N5V2 710 aa14.57□□□□□ -0.08
LRP1-202ENST00000338962 SSH2Q76I76 1423 aa14.57□□□□□ -0.08
LRP1-202ENST00000338962 KIF1AQ12756 1690 aa14.56□□□□□ -0.08
LRP1-202ENST00000338962 ROBO1Q9Y6N7 1651 aa14.56□□□□□ -0.08
LRP1-202ENST00000338962 ERICH6Q7L0X2 663 aa14.56□□□□□ -0.08
LRP1-202ENST00000338962 RGPD8O14715 1765 aaPredicted RBP14.56□□□□□ -0.08
LRP1-202ENST00000338962 USP6P35125 1406 aa14.56□□□□□ -0.08
LRP1-202ENST00000338962 ITSN1Q15811 1721 aa14.56□□□□□ -0.08
LRP1-202ENST00000338962 SHPRHQ149N8 1683 aa14.56□□□□□ -0.08
LRP1-202ENST00000338962 GGNBP2Q9H3C7 697 aa14.56□□□□□ -0.08
LRP1-202ENST00000338962 AHDC1Q5TGY3 1603 aaPredicted RBP14.55□□□□□ -0.08
LRP1-202ENST00000338962 PXDNQ92626 1479 aa14.55□□□□□ -0.08
LRP1-202ENST00000338962 SBNO1A3KN83 1393 aa14.55□□□□□ -0.08
LRP1-202ENST00000338962 FYB1O15117 783 aa14.54□□□□□ -0.08
LRP1-202ENST00000338962 DUSP27Q5VZP5 1158 aa14.54□□□□□ -0.08
LRP1-202ENST00000338962 XPCQ01831 940 aaPredicted RBP14.53□□□□□ -0.08
LRP1-202ENST00000338962 LRRC59Q96AG4 307 aaKnown RBP14.53□□□□□ -0.08
LRP1-202ENST00000338962 CCDC136Q96JN2 1154 aa14.53□□□□□ -0.08
LRP1-202ENST00000338962 TTC21BQ7Z4L5 1316 aa14.53□□□□□ -0.08
LRP1-202ENST00000338962 EDC4Q6P2E9 1401 aaKnown RBP14.53□□□□□ -0.08
LRP1-202ENST00000338962 SPATA31A3Q5VYP0 1347 aa14.53□□□□□ -0.08
LRP1-202ENST00000338962 TTC21AQ8NDW8 1320 aa14.52□□□□□ -0.09
LRP1-202ENST00000338962 ANKRD26Q9UPS8 1709 aa14.52□□□□□ -0.09
LRP1-202ENST00000338962 NHSL1Q5SYE7 1610 aa14.52□□□□□ -0.09
LRP1-202ENST00000338962 SLFN5Q08AF3 891 aa14.51□□□□□ -0.09
LRP1-202ENST00000338962 RUNDC1Q96C34 613 aa14.51□□□□□ -0.09
LRP1-202ENST00000338962 HSPA1LP34931 641 aa14.51□□□□□ -0.09
LRP1-202ENST00000338962 E9PSI1 815 aa14.5□□□□□ -0.09
LRP1-202ENST00000338962 KIF20BQ96Q89 1820 aa14.49□□□□□ -0.09
LRP1-202ENST00000338962 U2AF1L5P0DN76 240 aaPredicted RBP14.49□□□□□ -0.09
LRP1-202ENST00000338962 U2AF1Q01081 240 aaKnown RBP eCLIP14.49□□□□□ -0.09
LRP1-202ENST00000338962 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.49□□□□□ -0.09
LRP1-202ENST00000338962 TNS3Q68CZ2 1445 aa14.49□□□□□ -0.09
LRP1-202ENST00000338962 PAK3O75914 559 aaPredicted RBP14.49□□□□□ -0.09
LRP1-202ENST00000338962 TRMT2AQ8IZ69 625 aaKnown RBP14.48□□□□□ -0.09
LRP1-202ENST00000338962 ABTB2Q8N961 1025 aa14.48□□□□□ -0.09
LRP1-202ENST00000338962 AKAP12Q02952 1782 aa14.48□□□□□ -0.09
LRP1-202ENST00000338962 ARHGEF10O15013 1369 aa14.48□□□□□ -0.09
LRP1-202ENST00000338962 USP31Q70CQ4 1352 aa14.48□□□□□ -0.09
LRP1-202ENST00000338962 COL16A1Q07092 1604 aaPredicted RBP14.47□□□□□ -0.09
LRP1-202ENST00000338962 WWC1Q8IX03 1113 aa14.47□□□□□ -0.09
LRP1-202ENST00000338962 TCP11L2Q8N4U5 519 aa14.47□□□□□ -0.09
LRP1-202ENST00000338962 EXOC6Q8TAG9 804 aa14.47□□□□□ -0.09
LRP1-202ENST00000338962 MON2Q7Z3U7 1717 aa14.46□□□□□ -0.09
LRP1-202ENST00000338962 TRPM3Q9HCF6 1732 aaPredicted RBP14.46□□□□□ -0.09
LRP1-202ENST00000338962 PLIN1O60240 522 aa14.46□□□□□ -0.09
LRP1-202ENST00000338962 NEUROD2Q15784 382 aa14.46□□□□□ -0.09
LRP1-202ENST00000338962 SPINK5Q9NQ38 1064 aaPredicted RBP14.46□□□□□ -0.09
LRP1-202ENST00000338962 NME9Q86XW9 330 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms