RNA–Protein interactions for RNA: ENST00000338733.9

TBCCD1-201, Transcript of TBCC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBCCD1, Length 2,441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBCCD1-201ENST00000338733 KIF1BO60333 1816 aa13.74□□□□□ -0.21
TBCCD1-201ENST00000338733 TULP1O00294 542 aaPredicted RBP13.73□□□□□ -0.21
TBCCD1-201ENST00000338733 KNDC1Q76NI1 1749 aa13.71□□□□□ -0.21
TBCCD1-201ENST00000338733 FAM182BQ5T319 152 aa13.71□□□□□ -0.21
TBCCD1-201ENST00000338733 SPATA31A1Q5TZJ5 1347 aa13.71□□□□□ -0.21
TBCCD1-201ENST00000338733 CAMTA1Q9Y6Y1 1673 aa13.71□□□□□ -0.22
TBCCD1-201ENST00000338733 BARGINQ6ZT62 677 aa13.7□□□□□ -0.22
TBCCD1-201ENST00000338733 RGPD3A6NKT7 1758 aaPredicted RBP13.69□□□□□ -0.22
TBCCD1-201ENST00000338733 RGPD4Q7Z3J3 1758 aa13.69□□□□□ -0.22
TBCCD1-201ENST00000338733 ANKARQ7Z5J8 1434 aa13.68□□□□□ -0.22
TBCCD1-201ENST00000338733 NUTM2FA1L443 756 aa13.68□□□□□ -0.22
TBCCD1-201ENST00000338733 GIGYF1O75420 1035 aaPredicted RBP13.68□□□□□ -0.22
TBCCD1-201ENST00000338733 NRKQ7Z2Y5 1582 aa13.68□□□□□ -0.22
TBCCD1-201ENST00000338733 CASZ1Q86V15 1759 aa13.68□□□□□ -0.22
TBCCD1-201ENST00000338733 WAPLQ7Z5K2 1190 aa13.67□□□□□ -0.22
TBCCD1-201ENST00000338733 PLSCR1O15162 318 aa13.66□□□□□ -0.22
TBCCD1-201ENST00000338733 PPLO60437 1756 aa13.66□□□□□ -0.22
TBCCD1-201ENST00000338733 MAP3K5Q99683 1374 aa13.66□□□□□ -0.22
TBCCD1-201ENST00000338733 PDE3BQ13370 1112 aa13.66□□□□□ -0.22
TBCCD1-201ENST00000338733 CHD4Q14839 1912 aa13.65□□□□□ -0.22
TBCCD1-201ENST00000338733 LMOD2Q6P5Q4 547 aa13.65□□□□□ -0.22
TBCCD1-201ENST00000338733 PTGER2P43116 358 aa13.64□□□□□ -0.23
TBCCD1-201ENST00000338733 TRPM3Q9HCF6 1732 aaPredicted RBP13.64□□□□□ -0.23
TBCCD1-201ENST00000338733 PLEKHH1Q9ULM0 1364 aa13.64□□□□□ -0.23
TBCCD1-201ENST00000338733 DLC1Q96QB1 1528 aa13.64□□□□□ -0.23
TBCCD1-201ENST00000338733 ALS2Q96Q42 1657 aa13.64□□□□□ -0.23
TBCCD1-201ENST00000338733 IFT172Q9UG01 1749 aa13.63□□□□□ -0.23
TBCCD1-201ENST00000338733 HOMEZQ8IX15 550 aa13.63□□□□□ -0.23
TBCCD1-201ENST00000338733 SYT17Q9BSW7 474 aa13.63□□□□□ -0.23
TBCCD1-201ENST00000338733 THRAP3Q9Y2W1 955 aaKnown RBP13.62□□□□□ -0.23
TBCCD1-201ENST00000338733 GPRASP1Q5JY77 1395 aa13.62□□□□□ -0.23
TBCCD1-201ENST00000338733 PRDM11Q9NQV5 511 aa13.62□□□□□ -0.23
TBCCD1-201ENST00000338733 ANKRD30BQ9BXX2 1392 aa13.62□□□□□ -0.23
TBCCD1-201ENST00000338733 MYOM1P52179 1685 aa13.61□□□□□ -0.23
TBCCD1-201ENST00000338733 YTHDC2Q9H6S0 1430 aaKnown RBP13.61□□□□□ -0.23
TBCCD1-201ENST00000338733 EIF3AQ14152 1382 aaKnown RBP13.61□□□□□ -0.23
TBCCD1-201ENST00000338733 STK26Q9P289 416 aa13.61□□□□□ -0.23
TBCCD1-201ENST00000338733 CRYBG1Q9Y4K1 1723 aa13.6□□□□□ -0.23
TBCCD1-201ENST00000338733 FHDC1Q9C0D6 1143 aaPredicted RBP13.59□□□□□ -0.23
TBCCD1-201ENST00000338733 DHX57Q6P158 1386 aaKnown RBP13.59□□□□□ -0.23
TBCCD1-201ENST00000338733 MTFR1LQ9H019 292 aa13.58□□□□□ -0.24
TBCCD1-201ENST00000338733 SGIP1Q9BQI5 828 aa13.58□□□□□ -0.24
TBCCD1-201ENST00000338733 ADGRF5Q8IZF2 1346 aa13.57□□□□□ -0.24
TBCCD1-201ENST00000338733 SSH2Q76I76 1423 aa13.57□□□□□ -0.24
TBCCD1-201ENST00000338733 TCP11L2Q8N4U5 519 aa13.57□□□□□ -0.24
TBCCD1-201ENST00000338733 ACIN1Q9UKV3 1341 aaKnown RBP13.57□□□□□ -0.24
TBCCD1-201ENST00000338733 BCL9O00512 1426 aa13.57□□□□□ -0.24
TBCCD1-201ENST00000338733 ANO8Q9HCE9 1232 aaPredicted RBP13.56□□□□□ -0.24
TBCCD1-201ENST00000338733 OVOS2A0A0G2JMS6 1433 aa13.56□□□□□ -0.24
TBCCD1-201ENST00000338733 OVOS2A0A0J9YW53 1432 aa13.56□□□□□ -0.24
TBCCD1-201ENST00000338733 PIK3C2GO75747 1445 aa13.56□□□□□ -0.24
TBCCD1-201ENST00000338733 OVOS2Q6IE36 1432 aa13.56□□□□□ -0.24
TBCCD1-201ENST00000338733 PLEKHG5O94827 1062 aa13.56□□□□□ -0.24
TBCCD1-201ENST00000338733 RGPD8O14715 1765 aaPredicted RBP13.55□□□□□ -0.24
TBCCD1-201ENST00000338733 KIAA0232Q92628 1395 aa13.55□□□□□ -0.24
TBCCD1-201ENST00000338733 ZBTB7AO95365 584 aa13.55□□□□□ -0.24
TBCCD1-201ENST00000338733 BCL11BQ9C0K0 894 aaPredicted RBP13.55□□□□□ -0.24
TBCCD1-201ENST00000338733 PARP4Q9UKK3 1724 aaKnown RBP13.55□□□□□ -0.24
TBCCD1-201ENST00000338733 STK32BQ9NY57 414 aa13.54□□□□□ -0.24
TBCCD1-201ENST00000338733 PEAK1Q9H792 1746 aa13.54□□□□□ -0.24
TBCCD1-201ENST00000338733 ATP7BP35670 1465 aa13.53□□□□□ -0.24
TBCCD1-201ENST00000338733 AATKQ6ZMQ8 1374 aa13.53□□□□□ -0.24
TBCCD1-201ENST00000338733 PMFBP1Q8TBY8 1022 aa13.53□□□□□ -0.24
TBCCD1-201ENST00000338733 EVA1CP58658 441 aa13.53□□□□□ -0.24
TBCCD1-201ENST00000338733 STRN4Q9NRL3 753 aa13.53□□□□□ -0.24
TBCCD1-201ENST00000338733 TPRNQ4KMQ1 711 aa13.52□□□□□ -0.24
TBCCD1-201ENST00000338733 TMEM132EQ6IEE7 984 aa13.52□□□□□ -0.24
TBCCD1-201ENST00000338733 ATF5Q9Y2D1 282 aaPredicted RBP13.52□□□□□ -0.24
TBCCD1-201ENST00000338733 SLC15A2Q16348 729 aa13.52□□□□□ -0.25
TBCCD1-201ENST00000338733 SLC4A1APQ9BWU0 796 aaKnown RBP13.52□□□□□ -0.25
TBCCD1-201ENST00000338733 CPDO75976 1380 aa13.51□□□□□ -0.25
TBCCD1-201ENST00000338733 C14orf93Q9H972 538 aaKnown RBP13.51□□□□□ -0.25
TBCCD1-201ENST00000338733 SHANK3Q9BYB0 1731 aa13.51□□□□□ -0.25
TBCCD1-201ENST00000338733 HSPA6P17066 643 aa13.51□□□□□ -0.25
TBCCD1-201ENST00000338733 SPATA31E1Q6ZUB1 1445 aa13.51□□□□□ -0.25
TBCCD1-201ENST00000338733 GPR162Q16538 588 aa13.5□□□□□ -0.25
TBCCD1-201ENST00000338733 TULP4Q9NRJ4 1543 aa13.5□□□□□ -0.25
TBCCD1-201ENST00000338733 PHRF1Q9P1Y6 1649 aaKnown RBP13.5□□□□□ -0.25
TBCCD1-201ENST00000338733 PROM2Q8N271 834 aa13.49□□□□□ -0.25
TBCCD1-201ENST00000338733 PDGFDQ9GZP0 370 aaPredicted RBP13.49□□□□□ -0.25
TBCCD1-201ENST00000338733 CHRNA2Q15822 529 aa13.48□□□□□ -0.25
TBCCD1-201ENST00000338733 LMO7Q8WWI1 1683 aa13.48□□□□□ -0.25
TBCCD1-201ENST00000338733 LARP1Q6PKG0 1096 aaKnown RBP13.48□□□□□ -0.25
TBCCD1-201ENST00000338733 PRAM1Q96QH2 718 aa13.48□□□□□ -0.25
TBCCD1-201ENST00000338733 GRIN3BO60391 1043 aa13.47□□□□□ -0.25
TBCCD1-201ENST00000338733 USP35Q9P2H5 1018 aa13.47□□□□□ -0.25
TBCCD1-201ENST00000338733 NGDNQ8NEJ9 315 aaKnown RBP13.46□□□□□ -0.25
TBCCD1-201ENST00000338733 CDCA7Q9BWT1 371 aaPredicted RBP13.46□□□□□ -0.25
TBCCD1-201ENST00000338733 SBF2Q86WG5 1849 aa13.46□□□□□ -0.26
TBCCD1-201ENST00000338733 TXNRD1Q16881 649 aa13.45□□□□□ -0.26
TBCCD1-201ENST00000338733 CRB1P82279 1406 aa13.45□□□□□ -0.26
TBCCD1-201ENST00000338733 PAK3O75914 559 aaPredicted RBP13.45□□□□□ -0.26
TBCCD1-201ENST00000338733 POGKQ9P215 609 aa13.45□□□□□ -0.26
TBCCD1-201ENST00000338733 LOC105371045A0A1W2PR82 267 aa13.44□□□□□ -0.26
TBCCD1-201ENST00000338733 SLC16A10Q8TF71 515 aa13.44□□□□□ -0.26
TBCCD1-201ENST00000338733 PRR36Q9H6K5 1346 aa13.44□□□□□ -0.26
TBCCD1-201ENST00000338733 ZC3H6P61129 1189 aaKnown RBP13.44□□□□□ -0.26
TBCCD1-201ENST00000338733 DDB1Q16531 1140 aa13.43□□□□□ -0.26
TBCCD1-201ENST00000338733 KLHL34Q8N239 644 aa13.43□□□□□ -0.26
TBCCD1-201ENST00000338733 USP19O94966 1318 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms