RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 ZNF521Q96K83 1311 aa13.24□□□□□ -0.29
ARHGEF3-202ENST00000338458 NUTM2GQ5VZR2 741 aa13.24□□□□□ -0.29
ARHGEF3-202ENST00000338458 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.24□□□□□ -0.29
ARHGEF3-202ENST00000338458 ARHGAP23Q9P227 1491 aa13.24□□□□□ -0.29
ARHGEF3-202ENST00000338458 USP32Q8NFA0 1604 aa13.24□□□□□ -0.29
ARHGEF3-202ENST00000338458 C14orf37Q86TY3 774 aa13.24□□□□□ -0.29
ARHGEF3-202ENST00000338458 INSRP06213 1382 aa13.23□□□□□ -0.29
ARHGEF3-202ENST00000338458 CEP170BQ9Y4F5 1589 aaPredicted RBP13.23□□□□□ -0.29
ARHGEF3-202ENST00000338458 SLIT1O75093 1534 aa13.23□□□□□ -0.29
ARHGEF3-202ENST00000338458 TSHZ2Q9NRE2 1034 aa13.23□□□□□ -0.29
ARHGEF3-202ENST00000338458 RNF123Q5XPI4 1314 aa13.23□□□□□ -0.29
ARHGEF3-202ENST00000338458 CPS1P31327 1500 aa13.23□□□□□ -0.29
ARHGEF3-202ENST00000338458 C20orf194Q5TEA3 1177 aa13.22□□□□□ -0.29
ARHGEF3-202ENST00000338458 ATP7BP35670 1465 aa13.22□□□□□ -0.29
ARHGEF3-202ENST00000338458 SHPRHQ149N8 1683 aa13.22□□□□□ -0.29
ARHGEF3-202ENST00000338458 MAPK8IP3Q9UPT6 1336 aa13.22□□□□□ -0.29
ARHGEF3-202ENST00000338458 MED14O60244 1454 aa13.22□□□□□ -0.29
ARHGEF3-202ENST00000338458 CPSF1Q10570 1443 aaKnown RBP13.21□□□□□ -0.29
ARHGEF3-202ENST00000338458 EDC4Q6P2E9 1401 aaKnown RBP13.21□□□□□ -0.3
ARHGEF3-202ENST00000338458 ERICH6BQ5W0A0 696 aa13.21□□□□□ -0.3
ARHGEF3-202ENST00000338458 PAK3O75914 559 aaPredicted RBP13.2□□□□□ -0.3
ARHGEF3-202ENST00000338458 ZNF692Q9BU19 519 aaPredicted RBP13.2□□□□□ -0.3
ARHGEF3-202ENST00000338458 BCAR3O75815 825 aa13.2□□□□□ -0.3
ARHGEF3-202ENST00000338458 TTC21BQ7Z4L5 1316 aa13.2□□□□□ -0.3
ARHGEF3-202ENST00000338458 KNDC1Q76NI1 1749 aa13.2□□□□□ -0.3
ARHGEF3-202ENST00000338458 E9PSI1 815 aa13.19□□□□□ -0.3
ARHGEF3-202ENST00000338458 CRBNQ96SW2 442 aa13.19□□□□□ -0.3
ARHGEF3-202ENST00000338458 PRKAR2BP31323 418 aa13.19□□□□□ -0.3
ARHGEF3-202ENST00000338458 BCL2L13Q9BXK5 485 aa13.19□□□□□ -0.3
ARHGEF3-202ENST00000338458 KIF20BQ96Q89 1820 aa13.18□□□□□ -0.3
ARHGEF3-202ENST00000338458 TSR2Q969E8 191 aaKnown RBP13.18□□□□□ -0.3
ARHGEF3-202ENST00000338458 NKTRP30414 1462 aaKnown RBP13.17□□□□□ -0.3
ARHGEF3-202ENST00000338458 RIPK4P57078 832 aa13.17□□□□□ -0.3
ARHGEF3-202ENST00000338458 CDC42BPGQ6DT37 1551 aa13.17□□□□□ -0.3
ARHGEF3-202ENST00000338458 LAS1LQ9Y4W2 734 aaKnown RBP13.17□□□□□ -0.3
ARHGEF3-202ENST00000338458 MAP2P11137 1827 aaKnown RBP13.17□□□□□ -0.3
ARHGEF3-202ENST00000338458 PLEKHG3A1L390 1219 aa13.17□□□□□ -0.3
ARHGEF3-202ENST00000338458 TMPOP42166 694 aaKnown RBP13.17□□□□□ -0.3
ARHGEF3-202ENST00000338458 FRAT1Q92837 279 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF3-202ENST00000338458 HSPA2P54652 639 aa13.16□□□□□ -0.3
ARHGEF3-202ENST00000338458 CANXP27824 592 aaKnown RBP13.15□□□□□ -0.3
ARHGEF3-202ENST00000338458 PHACTR3Q96KR7 559 aa13.15□□□□□ -0.3
ARHGEF3-202ENST00000338458 PLEKHF1Q96S99 279 aa13.15□□□□□ -0.3
ARHGEF3-202ENST00000338458 ADAMTSL3P82987 1691 aa13.15□□□□□ -0.3
ARHGEF3-202ENST00000338458 ZBTB7CA1YPR0 619 aa13.15□□□□□ -0.3
ARHGEF3-202ENST00000338458 NEFMP07197 916 aa13.15□□□□□ -0.3
ARHGEF3-202ENST00000338458 XPCQ01831 940 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF3-202ENST00000338458 RGPD8O14715 1765 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF3-202ENST00000338458 THUMPD2Q9BTF0 503 aaKnown RBP13.15□□□□□ -0.3
ARHGEF3-202ENST00000338458 SETD1BQ9UPS6 1966 aaKnown RBP13.14□□□□□ -0.31
ARHGEF3-202ENST00000338458 NLRP6P59044 892 aa13.14□□□□□ -0.31
ARHGEF3-202ENST00000338458 TRMT2AQ8IZ69 625 aaKnown RBP13.14□□□□□ -0.31
ARHGEF3-202ENST00000338458 ANKRD26Q9UPS8 1709 aa13.14□□□□□ -0.31
ARHGEF3-202ENST00000338458 HSP90AB2PQ58FF8 381 aa13.14□□□□□ -0.31
ARHGEF3-202ENST00000338458 ESCO1Q5FWF5 840 aa13.14□□□□□ -0.31
ARHGEF3-202ENST00000338458 COL3A1P02461 1466 aaPredicted RBP13.14□□□□□ -0.31
ARHGEF3-202ENST00000338458 USP6P35125 1406 aa13.14□□□□□ -0.31
ARHGEF3-202ENST00000338458 ITSN1Q15811 1721 aa13.13□□□□□ -0.31
ARHGEF3-202ENST00000338458 PTCH1Q13635 1447 aa13.13□□□□□ -0.31
ARHGEF3-202ENST00000338458 DIP2AQ14689 1571 aa13.13□□□□□ -0.31
ARHGEF3-202ENST00000338458 LMOD2Q6P5Q4 547 aa13.13□□□□□ -0.31
ARHGEF3-202ENST00000338458 AEBP1Q8IUX7 1158 aa13.13□□□□□ -0.31
ARHGEF3-202ENST00000338458 IL13P35225 146 aa13.12□□□□□ -0.31
ARHGEF3-202ENST00000338458 TRIM35Q9UPQ4 493 aa13.12□□□□□ -0.31
ARHGEF3-202ENST00000338458 ABTB2Q8N961 1025 aa13.12□□□□□ -0.31
ARHGEF3-202ENST00000338458 RSPH6AQ9H0K4 717 aa13.12□□□□□ -0.31
ARHGEF3-202ENST00000338458 PNPLA6Q8IY17 1366 aa13.12□□□□□ -0.31
ARHGEF3-202ENST00000338458 PROSER2Q86WR7 435 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF3-202ENST00000338458 NGEFQ8N5V2 710 aa13.12□□□□□ -0.31
ARHGEF3-202ENST00000338458 IQSEC2Q5JU85 1478 aa13.11□□□□□ -0.31
ARHGEF3-202ENST00000338458 FCHSD2O94868 740 aa13.11□□□□□ -0.31
ARHGEF3-202ENST00000338458 SKAP1Q86WV1 359 aa13.11□□□□□ -0.31
ARHGEF3-202ENST00000338458 NPHP4O75161 1426 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF3-202ENST00000338458 WDR63Q8IWG1 891 aa13.11□□□□□ -0.31
ARHGEF3-202ENST00000338458 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF3-202ENST00000338458 LTV1Q96GA3 475 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF3-202ENST00000338458 SULT6B1Q6IMI4 303 aa13.11□□□□□ -0.31
ARHGEF3-202ENST00000338458 CLUAP1Q96AJ1 413 aa13.11□□□□□ -0.31
ARHGEF3-202ENST00000338458 MON2Q7Z3U7 1717 aa13.1□□□□□ -0.31
ARHGEF3-202ENST00000338458 PHF8Q9UPP1 1060 aa13.1□□□□□ -0.31
ARHGEF3-202ENST00000338458 AMPHP49418 695 aa13.1□□□□□ -0.31
ARHGEF3-202ENST00000338458 EIF4A2Q14240 407 aaKnown RBP13.1□□□□□ -0.31
ARHGEF3-202ENST00000338458 ORAI2Q96SN7 254 aa13.1□□□□□ -0.31
ARHGEF3-202ENST00000338458 ADGRB2O60241 1585 aa13.09□□□□□ -0.31
ARHGEF3-202ENST00000338458 EXOSC9Q06265 439 aaKnown RBP13.09□□□□□ -0.31
ARHGEF3-202ENST00000338458 DCTN1Q14203 1278 aa13.09□□□□□ -0.31
ARHGEF3-202ENST00000338458 PANK1Q8TE04 598 aa13.09□□□□□ -0.31
ARHGEF3-202ENST00000338458 MYH16Q9H6N6 1097 aa13.09□□□□□ -0.31
ARHGEF3-202ENST00000338458 TNNQ9UQP3 1299 aa13.09□□□□□ -0.31
ARHGEF3-202ENST00000338458 AKAP12Q02952 1782 aa13.09□□□□□ -0.31
ARHGEF3-202ENST00000338458 FOXO3O43524 673 aa13.09□□□□□ -0.31
ARHGEF3-202ENST00000338458 PHF23Q9BUL5 403 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF3-202ENST00000338458 FAM83GA6ND36 823 aa13.09□□□□□ -0.31
ARHGEF3-202ENST00000338458 PSME1Q06323 249 aa13.09□□□□□ -0.31
ARHGEF3-202ENST00000338458 PNNQ9H307 717 aaKnown RBP13.09□□□□□ -0.31
ARHGEF3-202ENST00000338458 MAP3K19Q56UN5 1328 aa13.08□□□□□ -0.31
ARHGEF3-202ENST00000338458 XRN1Q8IZH2 1706 aaKnown RBP13.08□□□□□ -0.32
ARHGEF3-202ENST00000338458 FANCIQ9NVI1 1328 aa13.08□□□□□ -0.32
ARHGEF3-202ENST00000338458 ELL2O00472 640 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF3-202ENST00000338458 PIK3R4Q99570 1358 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms