RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 SRPK2P78362 688 aaKnown RBP19.26■□□□□ 0.67
NUDCD3-201ENST00000338427 CENPJQ9HC77 1338 aaPredicted RBP19.25■□□□□ 0.67
NUDCD3-201ENST00000338427 ZC3H6P61129 1189 aaKnown RBP19.25■□□□□ 0.67
NUDCD3-201ENST00000338427 CHRNA2Q15822 529 aa19.25■□□□□ 0.67
NUDCD3-201ENST00000338427 ALS2Q96Q42 1657 aa19.24■□□□□ 0.67
NUDCD3-201ENST00000338427 KIAA1210Q9ULL0 1709 aa19.23■□□□□ 0.67
NUDCD3-201ENST00000338427 ONECUT3O60422 494 aaPredicted RBP19.23■□□□□ 0.67
NUDCD3-201ENST00000338427 ABCA3Q99758 1704 aa19.22■□□□□ 0.67
NUDCD3-201ENST00000338427 FAM98CQ17RN3 349 aaKnown RBP19.22■□□□□ 0.67
NUDCD3-201ENST00000338427 CABP1Q9NZU7 370 aa19.22■□□□□ 0.67
NUDCD3-201ENST00000338427 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.21■□□□□ 0.67
NUDCD3-201ENST00000338427 PRDM11Q9NQV5 511 aa19.21■□□□□ 0.67
NUDCD3-201ENST00000338427 PLCH1Q4KWH8 1693 aa19.2■□□□□ 0.66
NUDCD3-201ENST00000338427 A0A0G2JS52 829 aa19.2■□□□□ 0.66
NUDCD3-201ENST00000338427 MYT1Q01538 1121 aa19.2■□□□□ 0.66
NUDCD3-201ENST00000338427 FAM182BQ5T319 152 aa19.2■□□□□ 0.66
NUDCD3-201ENST00000338427 ABTB2Q8N961 1025 aa19.2■□□□□ 0.66
NUDCD3-201ENST00000338427 POLR3AO14802 1390 aaPredicted RBP19.19■□□□□ 0.66
NUDCD3-201ENST00000338427 BRWD3Q6RI45 1802 aa19.19■□□□□ 0.66
NUDCD3-201ENST00000338427 KIAA0232Q92628 1395 aa19.19■□□□□ 0.66
NUDCD3-201ENST00000338427 KRT27Q7Z3Y8 459 aa19.18■□□□□ 0.66
NUDCD3-201ENST00000338427 DEFB132Q7Z7B7 95 aa19.18■□□□□ 0.66
NUDCD3-201ENST00000338427 STRN4Q9NRL3 753 aa19.18■□□□□ 0.66
NUDCD3-201ENST00000338427 PPIP5K1Q6PFW1 1433 aa19.17■□□□□ 0.66
NUDCD3-201ENST00000338427 EP400Q96L91 3159 aa19.17■□□□□ 0.66
NUDCD3-201ENST00000338427 SPATA31A5Q5VU36 1347 aa19.16■□□□□ 0.66
NUDCD3-201ENST00000338427 SPATA31A7Q8IWB4 1347 aa19.16■□□□□ 0.66
NUDCD3-201ENST00000338427 NWD2Q9ULI1 1742 aa19.15■□□□□ 0.66
NUDCD3-201ENST00000338427 CCDC125Q86Z20 511 aa19.15■□□□□ 0.66
NUDCD3-201ENST00000338427 ROCK2O75116 1388 aaKnown RBP19.15■□□□□ 0.66
NUDCD3-201ENST00000338427 ITSN1Q15811 1721 aa19.14■□□□□ 0.66
NUDCD3-201ENST00000338427 CRYBG1Q9Y4K1 1723 aa19.14■□□□□ 0.65
NUDCD3-201ENST00000338427 ZBTB7CA1YPR0 619 aa19.13■□□□□ 0.65
NUDCD3-201ENST00000338427 USP35Q9P2H5 1018 aa19.13■□□□□ 0.65
NUDCD3-201ENST00000338427 TOPAZ1Q8N9V7 1692 aa19.13■□□□□ 0.65
NUDCD3-201ENST00000338427 COL14A1Q05707 1796 aaKnown RBP19.13■□□□□ 0.65
NUDCD3-201ENST00000338427 NRAPQ86VF7 1730 aa19.12■□□□□ 0.65
NUDCD3-201ENST00000338427 EVC2Q86UK5 1308 aa19.12■□□□□ 0.65
NUDCD3-201ENST00000338427 GCP02774 474 aa19.12■□□□□ 0.65
NUDCD3-201ENST00000338427 EVA1CP58658 441 aa19.12■□□□□ 0.65
NUDCD3-201ENST00000338427 NLRP13Q86W25 1043 aa19.12■□□□□ 0.65
NUDCD3-201ENST00000338427 QRICH2Q9H0J4 1663 aa19.11■□□□□ 0.65
NUDCD3-201ENST00000338427 TRPM1Q7Z4N2 1603 aa19.11■□□□□ 0.65
NUDCD3-201ENST00000338427 NLRP6P59044 892 aa19.11■□□□□ 0.65
NUDCD3-201ENST00000338427 SPATA31A1Q5TZJ5 1347 aa19.1■□□□□ 0.65
NUDCD3-201ENST00000338427 LARP1Q6PKG0 1096 aaKnown RBP19.1■□□□□ 0.65
NUDCD3-201ENST00000338427 TRIM26Q12899 539 aaPredicted RBP19.09■□□□□ 0.65
NUDCD3-201ENST00000338427 ZRANB1Q9UGI0 708 aa19.09■□□□□ 0.65
NUDCD3-201ENST00000338427 USP19O94966 1318 aa19.08■□□□□ 0.65
NUDCD3-201ENST00000338427 CARD11Q9BXL7 1154 aa19.08■□□□□ 0.64
NUDCD3-201ENST00000338427 BLMP54132 1417 aaPredicted RBP19.08■□□□□ 0.64
NUDCD3-201ENST00000338427 PHRF1Q9P1Y6 1649 aaKnown RBP19.07■□□□□ 0.64
NUDCD3-201ENST00000338427 CAMTA1Q9Y6Y1 1673 aa19.06■□□□□ 0.64
NUDCD3-201ENST00000338427 SF3B2Q13435 895 aaKnown RBP19.06■□□□□ 0.64
NUDCD3-201ENST00000338427 USP6P35125 1406 aa19.06■□□□□ 0.64
NUDCD3-201ENST00000338427 SOX12O15370 315 aa19.05■□□□□ 0.64
NUDCD3-201ENST00000338427 TTC21BQ7Z4L5 1316 aa19.04■□□□□ 0.64
NUDCD3-201ENST00000338427 SSH2Q76I76 1423 aa19.04■□□□□ 0.64
NUDCD3-201ENST00000338427 EN1Q05925 392 aaPredicted RBP19.03■□□□□ 0.64
NUDCD3-201ENST00000338427 AXIN2Q9Y2T1 843 aa19.03■□□□□ 0.64
NUDCD3-201ENST00000338427 TONSLQ96HA7 1378 aa19.03■□□□□ 0.64
NUDCD3-201ENST00000338427 ZNF692Q9BU19 519 aaPredicted RBP19.02■□□□□ 0.64
NUDCD3-201ENST00000338427 CPDO75976 1380 aa19.02■□□□□ 0.64
NUDCD3-201ENST00000338427 SLC12A5Q9H2X9 1139 aa19.01■□□□□ 0.63
NUDCD3-201ENST00000338427 NRKQ7Z2Y5 1582 aa19.01■□□□□ 0.63
NUDCD3-201ENST00000338427 TRIM37O94972 964 aa19■□□□□ 0.63
NUDCD3-201ENST00000338427 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19■□□□□ 0.63
NUDCD3-201ENST00000338427 TMC1Q8TDI8 760 aa19■□□□□ 0.63
NUDCD3-201ENST00000338427 TCP11L2Q8N4U5 519 aa18.99■□□□□ 0.63
NUDCD3-201ENST00000338427 BRD4O60885 1362 aaPredicted RBP18.98■□□□□ 0.63
NUDCD3-201ENST00000338427 BARGINQ6ZT62 677 aa18.98■□□□□ 0.63
NUDCD3-201ENST00000338427 SRCAPQ6ZRS2 3230 aa18.97■□□□□ 0.63
NUDCD3-201ENST00000338427 KTN1Q86UP2 1357 aaKnown RBP18.97■□□□□ 0.63
NUDCD3-201ENST00000338427 PSDA5PKW4 1024 aaPredicted RBP18.97■□□□□ 0.63
NUDCD3-201ENST00000338427 BAG6P46379 1132 aa18.97■□□□□ 0.63
NUDCD3-201ENST00000338427 PDE3BQ13370 1112 aa18.97■□□□□ 0.63
NUDCD3-201ENST00000338427 THSD7AQ9UPZ6 1657 aa18.97■□□□□ 0.63
NUDCD3-201ENST00000338427 ST20-MTHFSA0A0A6YYL1 179 aa18.96■□□□□ 0.63
NUDCD3-201ENST00000338427 EZH2Q15910 746 aaKnown RBP18.96■□□□□ 0.63
NUDCD3-201ENST00000338427 ARHGEF25Q86VW2 580 aa18.96■□□□□ 0.63
NUDCD3-201ENST00000338427 NME9Q86XW9 330 aa18.96■□□□□ 0.63
NUDCD3-201ENST00000338427 CPSF1Q10570 1443 aaKnown RBP18.96■□□□□ 0.63
NUDCD3-201ENST00000338427 LMO7Q8WWI1 1683 aa18.95■□□□□ 0.62
NUDCD3-201ENST00000338427 FAM196AQ6ZSG2 479 aa18.95■□□□□ 0.62
NUDCD3-201ENST00000338427 PIK3C2AO00443 1686 aa18.95■□□□□ 0.62
NUDCD3-201ENST00000338427 AATKQ6ZMQ8 1374 aa18.94■□□□□ 0.62
NUDCD3-201ENST00000338427 TOM1L2Q6ZVM7 507 aa18.94■□□□□ 0.62
NUDCD3-201ENST00000338427 COL5A2P05997 1499 aaPredicted RBP18.94■□□□□ 0.62
NUDCD3-201ENST00000338427 APBA3O96018 575 aa18.93■□□□□ 0.62
NUDCD3-201ENST00000338427 SLIT3O75094 1523 aa18.93■□□□□ 0.62
NUDCD3-201ENST00000338427 TTC21AQ8NDW8 1320 aa18.93■□□□□ 0.62
NUDCD3-201ENST00000338427 TESK2Q96S53 571 aa18.92■□□□□ 0.62
NUDCD3-201ENST00000338427 KCNH5Q8NCM2 988 aa18.91■□□□□ 0.62
NUDCD3-201ENST00000338427 CAMKK2Q96RR4 588 aa18.91■□□□□ 0.62
NUDCD3-201ENST00000338427 THRAP3Q9Y2W1 955 aaKnown RBP18.91■□□□□ 0.62
NUDCD3-201ENST00000338427 COL18A1P39060 1754 aa18.91■□□□□ 0.62
NUDCD3-201ENST00000338427 AKAP12Q02952 1782 aa18.91■□□□□ 0.62
NUDCD3-201ENST00000338427 CD163L1Q9NR16 1453 aa18.9■□□□□ 0.62
NUDCD3-201ENST00000338427 PCGF6Q9BYE7 350 aa18.9■□□□□ 0.62
NUDCD3-201ENST00000338427 SBNO2Q9Y2G9 1366 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms