RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 EP400Q96L91 3159 aa15.4■□□□□ 0.06
CAPN3-202ENST00000337571 FAM83GA6ND36 823 aa15.4■□□□□ 0.06
CAPN3-202ENST00000337571 VPS72Q15906 364 aa15.4■□□□□ 0.06
CAPN3-202ENST00000337571 CDK19Q9BWU1 502 aa15.4■□□□□ 0.06
CAPN3-202ENST00000337571 RALGAPBQ86X10 1494 aa15.4■□□□□ 0.06
CAPN3-202ENST00000337571 ARHGEF28Q8N1W1 1705 aaKnown RBP15.38■□□□□ 0.05
CAPN3-202ENST00000337571 NWD2Q9ULI1 1742 aa15.38■□□□□ 0.05
CAPN3-202ENST00000337571 ITSN1Q15811 1721 aa15.37■□□□□ 0.05
CAPN3-202ENST00000337571 KIAA1210Q9ULL0 1709 aa15.37■□□□□ 0.05
CAPN3-202ENST00000337571 A0A0G2JS52 829 aa15.37■□□□□ 0.05
CAPN3-202ENST00000337571 MYT1Q01538 1121 aa15.37■□□□□ 0.05
CAPN3-202ENST00000337571 SEPT12Q8IYM1 358 aa15.37■□□□□ 0.05
CAPN3-202ENST00000337571 BTG4Q9NY30 223 aa15.37■□□□□ 0.05
CAPN3-202ENST00000337571 PLCH1Q4KWH8 1693 aa15.37■□□□□ 0.05
CAPN3-202ENST00000337571 SF3B2Q13435 895 aaKnown RBP15.36■□□□□ 0.05
CAPN3-202ENST00000337571 ZRANB1Q9UGI0 708 aa15.36■□□□□ 0.05
CAPN3-202ENST00000337571 CCDC61Q9Y6R9 512 aa15.36■□□□□ 0.05
CAPN3-202ENST00000337571 ABCA3Q99758 1704 aa15.36■□□□□ 0.05
CAPN3-202ENST00000337571 TRPM3Q9HCF6 1732 aaPredicted RBP15.36■□□□□ 0.05
CAPN3-202ENST00000337571 GLI3P10071 1580 aa15.36■□□□□ 0.05
CAPN3-202ENST00000337571 NBPF1Q3BBV0 1214 aa15.35■□□□□ 0.05
CAPN3-202ENST00000337571 ONECUT3O60422 494 aaPredicted RBP15.34■□□□□ 0.05
CAPN3-202ENST00000337571 SRPK2P78362 688 aaKnown RBP15.34■□□□□ 0.05
CAPN3-202ENST00000337571 ALS2Q96Q42 1657 aa15.34■□□□□ 0.05
CAPN3-202ENST00000337571 KRT27Q7Z3Y8 459 aa15.33■□□□□ 0.04
CAPN3-202ENST00000337571 PRDM11Q9NQV5 511 aa15.33■□□□□ 0.04
CAPN3-202ENST00000337571 BRWD3Q6RI45 1802 aa15.33■□□□□ 0.04
CAPN3-202ENST00000337571 COL14A1Q05707 1796 aaKnown RBP15.32■□□□□ 0.04
CAPN3-202ENST00000337571 NBPF8Q3BBV2 869 aa15.32■□□□□ 0.04
CAPN3-202ENST00000337571 ACEP12821 1306 aa15.32■□□□□ 0.04
CAPN3-202ENST00000337571 ATP7BP35670 1465 aa15.32■□□□□ 0.04
CAPN3-202ENST00000337571 NEUROD1Q13562 356 aa15.31■□□□□ 0.04
CAPN3-202ENST00000337571 FAM98CQ17RN3 349 aaKnown RBP15.31■□□□□ 0.04
CAPN3-202ENST00000337571 ABTB2Q8N961 1025 aa15.31■□□□□ 0.04
CAPN3-202ENST00000337571 CENPJQ9HC77 1338 aaPredicted RBP15.31■□□□□ 0.04
CAPN3-202ENST00000337571 PLEKHG3A1L390 1219 aa15.3■□□□□ 0.04
CAPN3-202ENST00000337571 BLMP54132 1417 aaPredicted RBP15.3■□□□□ 0.04
CAPN3-202ENST00000337571 NUTM2GQ5VZR2 741 aa15.3■□□□□ 0.04
CAPN3-202ENST00000337571 L3MBTL2Q969R5 705 aa15.3■□□□□ 0.04
CAPN3-202ENST00000337571 EVA1CP58658 441 aa15.29■□□□□ 0.04
CAPN3-202ENST00000337571 ZC3H6P61129 1189 aaKnown RBP15.29■□□□□ 0.04
CAPN3-202ENST00000337571 POLR3AO14802 1390 aaPredicted RBP15.28■□□□□ 0.04
CAPN3-202ENST00000337571 SIN3AQ96ST3 1273 aa15.28■□□□□ 0.04
CAPN3-202ENST00000337571 CABP2Q9NPB3 220 aa15.28■□□□□ 0.04
CAPN3-202ENST00000337571 KIAA0232Q92628 1395 aa15.27■□□□□ 0.04
CAPN3-202ENST00000337571 SPATA31A5Q5VU36 1347 aa15.27■□□□□ 0.04
CAPN3-202ENST00000337571 SPATA31A7Q8IWB4 1347 aa15.27■□□□□ 0.04
CAPN3-202ENST00000337571 NRAPQ86VF7 1730 aa15.27■□□□□ 0.04
CAPN3-202ENST00000337571 CHRNA2Q15822 529 aa15.27■□□□□ 0.04
CAPN3-202ENST00000337571 STRN4Q9NRL3 753 aa15.27■□□□□ 0.04
CAPN3-202ENST00000337571 NLRP13Q86W25 1043 aa15.26■□□□□ 0.03
CAPN3-202ENST00000337571 FOXD4L1Q9NU39 408 aa15.26■□□□□ 0.03
CAPN3-202ENST00000337571 PPIP5K1Q6PFW1 1433 aa15.26■□□□□ 0.03
CAPN3-202ENST00000337571 CRYBG1Q9Y4K1 1723 aa15.25■□□□□ 0.03
CAPN3-202ENST00000337571 TOPAZ1Q8N9V7 1692 aa15.25■□□□□ 0.03
CAPN3-202ENST00000337571 EVC2Q86UK5 1308 aa15.24■□□□□ 0.03
CAPN3-202ENST00000337571 BAG6P46379 1132 aa15.24■□□□□ 0.03
CAPN3-202ENST00000337571 DEFB132Q7Z7B7 95 aa15.24■□□□□ 0.03
CAPN3-202ENST00000337571 CABP1Q9NZU7 370 aa15.24■□□□□ 0.03
CAPN3-202ENST00000337571 QRICH2Q9H0J4 1663 aa15.24■□□□□ 0.03
CAPN3-202ENST00000337571 SRCAPQ6ZRS2 3230 aa15.23■□□□□ 0.03
CAPN3-202ENST00000337571 USP35Q9P2H5 1018 aa15.23■□□□□ 0.03
CAPN3-202ENST00000337571 PHRF1Q9P1Y6 1649 aaKnown RBP15.23■□□□□ 0.03
CAPN3-202ENST00000337571 SPATA31A1Q5TZJ5 1347 aa15.22■□□□□ 0.03
CAPN3-202ENST00000337571 BRD4O60885 1362 aaPredicted RBP15.22■□□□□ 0.03
CAPN3-202ENST00000337571 ROCK2O75116 1388 aaKnown RBP15.22■□□□□ 0.03
CAPN3-202ENST00000337571 ZBTB22O15209 634 aa15.21■□□□□ 0.03
CAPN3-202ENST00000337571 GCP02774 474 aa15.21■□□□□ 0.03
CAPN3-202ENST00000337571 ZBTB7CA1YPR0 619 aa15.2■□□□□ 0.02
CAPN3-202ENST00000337571 NLRP6P59044 892 aa15.2■□□□□ 0.02
CAPN3-202ENST00000337571 FAM182BQ5T319 152 aa15.2■□□□□ 0.02
CAPN3-202ENST00000337571 TRPM1Q7Z4N2 1603 aa15.19■□□□□ 0.02
CAPN3-202ENST00000337571 PDE3BQ13370 1112 aa15.19■□□□□ 0.02
CAPN3-202ENST00000337571 ZNF692Q9BU19 519 aaPredicted RBP15.19■□□□□ 0.02
CAPN3-202ENST00000337571 FAM196AQ6ZSG2 479 aa15.18■□□□□ 0.02
CAPN3-202ENST00000337571 CPDO75976 1380 aa15.18■□□□□ 0.02
CAPN3-202ENST00000337571 USP19O94966 1318 aa15.17■□□□□ 0.02
CAPN3-202ENST00000337571 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
CAPN3-202ENST00000337571 LARP1Q6PKG0 1096 aaKnown RBP15.17■□□□□ 0.02
CAPN3-202ENST00000337571 BARGINQ6ZT62 677 aa15.17■□□□□ 0.02
CAPN3-202ENST00000337571 TCP11L2Q8N4U5 519 aa15.17■□□□□ 0.02
CAPN3-202ENST00000337571 RGPD1P0DJD0 1748 aa15.16■□□□□ 0.02
CAPN3-202ENST00000337571 USP6P35125 1406 aa15.16■□□□□ 0.02
CAPN3-202ENST00000337571 SSH2Q76I76 1423 aa15.16■□□□□ 0.02
CAPN3-202ENST00000337571 THSD7AQ9UPZ6 1657 aa15.16■□□□□ 0.02
CAPN3-202ENST00000337571 NRKQ7Z2Y5 1582 aa15.15■□□□□ 0.02
CAPN3-202ENST00000337571 EN1Q05925 392 aaPredicted RBP15.15■□□□□ 0.02
CAPN3-202ENST00000337571 THRAP3Q9Y2W1 955 aaKnown RBP15.15■□□□□ 0.02
CAPN3-202ENST00000337571 CAMTA1Q9Y6Y1 1673 aa15.15■□□□□ 0.02
CAPN3-202ENST00000337571 TRIM37O94972 964 aa15.14■□□□□ 0.01
CAPN3-202ENST00000337571 CARD11Q9BXL7 1154 aa15.14■□□□□ 0.01
CAPN3-202ENST00000337571 KCNH5Q8NCM2 988 aa15.13■□□□□ 0.01
CAPN3-202ENST00000337571 TONSLQ96HA7 1378 aa15.12■□□□□ 0.01
CAPN3-202ENST00000337571 APBA3O96018 575 aa15.12■□□□□ 0.01
CAPN3-202ENST00000337571 PSDA5PKW4 1024 aaPredicted RBP15.11■□□□□ 0.01
CAPN3-202ENST00000337571 TOM1L2Q6ZVM7 507 aa15.11■□□□□ 0.01
CAPN3-202ENST00000337571 SPINK5Q9NQ38 1064 aaPredicted RBP15.11■□□□□ 0.01
CAPN3-202ENST00000337571 TTC21BQ7Z4L5 1316 aa15.11■□□□□ 0.01
CAPN3-202ENST00000337571 TTC21AQ8NDW8 1320 aa15.11■□□□□ 0.01
CAPN3-202ENST00000337571 AATKQ6ZMQ8 1374 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms