RNA–Protein interactions for RNA: ENST00000337019.7

PACRG-201, Transcript of parkin coregulated, humanhuman

TSL 2 BASIC

Gene PACRG, Length 1,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-201ENST00000337019 TOPAZ1Q8N9V7 1692 aa11.8□□□□□ -0.52
PACRG-201ENST00000337019 POLR3AO14802 1390 aaPredicted RBP11.79□□□□□ -0.52
PACRG-201ENST00000337019 PLEKHG3A1L390 1219 aa11.79□□□□□ -0.52
PACRG-201ENST00000337019 QTRT2Q9H974 415 aaKnown RBP11.79□□□□□ -0.52
PACRG-201ENST00000337019 SBNO2Q9Y2G9 1366 aa11.79□□□□□ -0.52
PACRG-201ENST00000337019 SLC24A1O60721 1099 aa11.78□□□□□ -0.52
PACRG-201ENST00000337019 TRPC5Q9UL62 973 aaPredicted RBP11.78□□□□□ -0.52
PACRG-201ENST00000337019 TRPM3Q9HCF6 1732 aaPredicted RBP11.78□□□□□ -0.52
PACRG-201ENST00000337019 CABLES1Q8TDN4 633 aa11.78□□□□□ -0.52
PACRG-201ENST00000337019 BRD4O60885 1362 aaPredicted RBP11.77□□□□□ -0.52
PACRG-201ENST00000337019 RBM6P78332 1123 aaKnown RBP11.77□□□□□ -0.53
PACRG-201ENST00000337019 FNBP4Q8N3X1 1017 aaPredicted RBP11.77□□□□□ -0.53
PACRG-201ENST00000337019 CABP1Q9NZU7 370 aa11.76□□□□□ -0.53
PACRG-201ENST00000337019 CDK12Q9NYV4 1490 aaPredicted RBP11.76□□□□□ -0.53
PACRG-201ENST00000337019 ALS2Q96Q42 1657 aa11.75□□□□□ -0.53
PACRG-201ENST00000337019 MYT1Q01538 1121 aa11.75□□□□□ -0.53
PACRG-201ENST00000337019 ABTB2Q8N961 1025 aa11.75□□□□□ -0.53
PACRG-201ENST00000337019 PRDM11Q9NQV5 511 aa11.75□□□□□ -0.53
PACRG-201ENST00000337019 CCDC9Q9Y3X0 531 aaKnown RBP11.75□□□□□ -0.53
PACRG-201ENST00000337019 MARF1Q9Y4F3 1742 aaKnown RBP11.74□□□□□ -0.53
PACRG-201ENST00000337019 USP47Q96K76 1375 aa11.74□□□□□ -0.53
PACRG-201ENST00000337019 USP6P35125 1406 aa11.74□□□□□ -0.53
PACRG-201ENST00000337019 NUTM2GQ5VZR2 741 aa11.74□□□□□ -0.53
PACRG-201ENST00000337019 NLRP13Q86W25 1043 aa11.74□□□□□ -0.53
PACRG-201ENST00000337019 UNC5CLQ8IV45 518 aa11.74□□□□□ -0.53
PACRG-201ENST00000337019 ABCA3Q99758 1704 aa11.74□□□□□ -0.53
PACRG-201ENST00000337019 ZNF692Q9BU19 519 aaPredicted RBP11.74□□□□□ -0.53
PACRG-201ENST00000337019 ATRNO75882 1429 aa11.73□□□□□ -0.53
PACRG-201ENST00000337019 HDGFL2Q7Z4V5 671 aaPredicted RBP11.73□□□□□ -0.53
PACRG-201ENST00000337019 TMC1Q8TDI8 760 aa11.73□□□□□ -0.53
PACRG-201ENST00000337019 SLIT2O94813 1529 aa11.72□□□□□ -0.53
PACRG-201ENST00000337019 ST20-MTHFSA0A0A6YYL1 179 aa11.72□□□□□ -0.53
PACRG-201ENST00000337019 TMF1P82094 1093 aa11.71□□□□□ -0.53
PACRG-201ENST00000337019 KTN1Q86UP2 1357 aaKnown RBP11.71□□□□□ -0.53
PACRG-201ENST00000337019 BCL9LQ86UU0 1499 aa11.71□□□□□ -0.53
PACRG-201ENST00000337019 RGS12O14924 1447 aa11.71□□□□□ -0.53
PACRG-201ENST00000337019 NLRP6P59044 892 aa11.71□□□□□ -0.54
PACRG-201ENST00000337019 CDCA8Q53HL2 280 aa11.71□□□□□ -0.54
PACRG-201ENST00000337019 TERF2IPQ9NYB0 399 aa11.71□□□□□ -0.54
PACRG-201ENST00000337019 NINLQ9Y2I6 1382 aa11.71□□□□□ -0.54
PACRG-201ENST00000337019 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.7□□□□□ -0.54
PACRG-201ENST00000337019 TTC21AQ8NDW8 1320 aa11.7□□□□□ -0.54
PACRG-201ENST00000337019 PLCH1Q4KWH8 1693 aa11.7□□□□□ -0.54
PACRG-201ENST00000337019 A0A0G2JS52 829 aa11.7□□□□□ -0.54
PACRG-201ENST00000337019 GJD4Q96KN9 370 aaPredicted RBP11.7□□□□□ -0.54
PACRG-201ENST00000337019 BTG4Q9NY30 223 aa11.7□□□□□ -0.54
PACRG-201ENST00000337019 COL14A1Q05707 1796 aaKnown RBP11.69□□□□□ -0.54
PACRG-201ENST00000337019 KIAA0232Q92628 1395 aa11.69□□□□□ -0.54
PACRG-201ENST00000337019 NWD2Q9ULI1 1742 aa11.69□□□□□ -0.54
PACRG-201ENST00000337019 ZBTB7CA1YPR0 619 aa11.69□□□□□ -0.54
PACRG-201ENST00000337019 VPS72Q15906 364 aa11.69□□□□□ -0.54
PACRG-201ENST00000337019 PUS7Q96PZ0 661 aaKnown RBP11.69□□□□□ -0.54
PACRG-201ENST00000337019 PHRF1Q9P1Y6 1649 aaKnown RBP11.69□□□□□ -0.54
PACRG-201ENST00000337019 USP19O94966 1318 aa11.69□□□□□ -0.54
PACRG-201ENST00000337019 FAM83GA6ND36 823 aa11.68□□□□□ -0.54
PACRG-201ENST00000337019 ZC3H6P61129 1189 aaKnown RBP11.68□□□□□ -0.54
PACRG-201ENST00000337019 TTC21BQ7Z4L5 1316 aa11.68□□□□□ -0.54
PACRG-201ENST00000337019 NRKQ7Z2Y5 1582 aa11.67□□□□□ -0.54
PACRG-201ENST00000337019 CRYBG1Q9Y4K1 1723 aa11.67□□□□□ -0.54
PACRG-201ENST00000337019 CPSF1Q10570 1443 aaKnown RBP11.67□□□□□ -0.54
PACRG-201ENST00000337019 MIER1Q8N108 512 aa11.67□□□□□ -0.54
PACRG-201ENST00000337019 TESK2Q96S53 571 aa11.67□□□□□ -0.54
PACRG-201ENST00000337019 EDC4Q6P2E9 1401 aaKnown RBP11.66□□□□□ -0.54
PACRG-201ENST00000337019 GCP02774 474 aa11.66□□□□□ -0.54
PACRG-201ENST00000337019 EVA1CP58658 441 aa11.66□□□□□ -0.54
PACRG-201ENST00000337019 CHRNA2Q15822 529 aa11.66□□□□□ -0.54
PACRG-201ENST00000337019 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.66□□□□□ -0.54
PACRG-201ENST00000337019 KCNH5Q8NCM2 988 aa11.66□□□□□ -0.54
PACRG-201ENST00000337019 STRN4Q9NRL3 753 aa11.66□□□□□ -0.54
PACRG-201ENST00000337019 CPDO75976 1380 aa11.66□□□□□ -0.54
PACRG-201ENST00000337019 AKAP12Q02952 1782 aa11.65□□□□□ -0.54
PACRG-201ENST00000337019 SSH2Q76I76 1423 aa11.65□□□□□ -0.55
PACRG-201ENST00000337019 SOX12O15370 315 aa11.64□□□□□ -0.55
PACRG-201ENST00000337019 EIF4G2P78344 907 aaKnown RBP eCLIP11.64□□□□□ -0.55
PACRG-201ENST00000337019 SLC12A5Q9H2X9 1139 aa11.64□□□□□ -0.55
PACRG-201ENST00000337019 A0A1W2PP64 1363 aa11.64□□□□□ -0.55
PACRG-201ENST00000337019 SLIT3O75094 1523 aa11.64□□□□□ -0.55
PACRG-201ENST00000337019 GLI3P10071 1580 aa11.64□□□□□ -0.55
PACRG-201ENST00000337019 PIK3C2AO00443 1686 aa11.63□□□□□ -0.55
PACRG-201ENST00000337019 MON2Q7Z3U7 1717 aa11.63□□□□□ -0.55
PACRG-201ENST00000337019 NRAPQ86VF7 1730 aa11.63□□□□□ -0.55
PACRG-201ENST00000337019 FAM98CQ17RN3 349 aaKnown RBP11.62□□□□□ -0.55
PACRG-201ENST00000337019 SEPT12Q8IYM1 358 aa11.62□□□□□ -0.55
PACRG-201ENST00000337019 POLR3GLQ9BT43 218 aa11.62□□□□□ -0.55
PACRG-201ENST00000337019 ANKRD36BQ8N2N9 1353 aa11.62□□□□□ -0.55
PACRG-201ENST00000337019 NME9Q86XW9 330 aa11.61□□□□□ -0.55
PACRG-201ENST00000337019 UPF1Q92900 1129 aaKnown RBP eCLIP11.61□□□□□ -0.55
PACRG-201ENST00000337019 SPATA31A5Q5VU36 1347 aa11.61□□□□□ -0.55
PACRG-201ENST00000337019 SPATA31A7Q8IWB4 1347 aa11.61□□□□□ -0.55
PACRG-201ENST00000337019 AATKQ6ZMQ8 1374 aa11.61□□□□□ -0.55
PACRG-201ENST00000337019 CD163L1Q9NR16 1453 aa11.61□□□□□ -0.55
PACRG-201ENST00000337019 USP31Q70CQ4 1352 aa11.6□□□□□ -0.55
PACRG-201ENST00000337019 COG3Q96JB2 828 aa11.6□□□□□ -0.55
PACRG-201ENST00000337019 YTHDC1Q96MU7 727 aaKnown RBP11.6□□□□□ -0.55
PACRG-201ENST00000337019 USP35Q9P2H5 1018 aa11.6□□□□□ -0.55
PACRG-201ENST00000337019 SPATA31A1Q5TZJ5 1347 aa11.59□□□□□ -0.55
PACRG-201ENST00000337019 CSB-PGBD3P0DP91 1061 aa11.59□□□□□ -0.55
PACRG-201ENST00000337019 SF3B2Q13435 895 aaKnown RBP11.59□□□□□ -0.55
PACRG-201ENST00000337019 KRT27Q7Z3Y8 459 aa11.59□□□□□ -0.55
PACRG-201ENST00000337019 COL5A2P05997 1499 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms