RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 CHMP5Q9NZZ3 219 aa14.71□□□□□ -0.05
FN1-202ENST00000336916 BIVM-ERCC5R4GMW8 1640 aa14.71□□□□□ -0.05
FN1-202ENST00000336916 ZNF287Q9HBT7 754 aa14.71□□□□□ -0.06
FN1-202ENST00000336916 SRCIN1Q9C0H9 1055 aa14.7□□□□□ -0.06
FN1-202ENST00000336916 KIAA1107Q9UPP5 1409 aa14.7□□□□□ -0.06
FN1-202ENST00000336916 TXNDC2Q86VQ3 553 aa14.7□□□□□ -0.06
FN1-202ENST00000336916 NACAP1Q9BZK3 213 aa14.7□□□□□ -0.06
FN1-202ENST00000336916 SNAPC4Q5SXM2 1469 aa14.7□□□□□ -0.06
FN1-202ENST00000336916 WDHD1O75717 1129 aaPredicted RBP14.7□□□□□ -0.06
FN1-202ENST00000336916 CCT4P50991 539 aaKnown RBP14.7□□□□□ -0.06
FN1-202ENST00000336916 CCDC27Q2M243 656 aa14.7□□□□□ -0.06
FN1-202ENST00000336916 NOL8Q76FK4 1167 aaKnown RBP14.7□□□□□ -0.06
FN1-202ENST00000336916 DESP17661 470 aa14.7□□□□□ -0.06
FN1-202ENST00000336916 OFD1O75665 1012 aa14.69□□□□□ -0.06
FN1-202ENST00000336916 ZNF652Q9Y2D9 606 aa14.69□□□□□ -0.06
FN1-202ENST00000336916 IKQ13123 557 aaPredicted RBP14.69□□□□□ -0.06
FN1-202ENST00000336916 NESP48681 1621 aa14.69□□□□□ -0.06
FN1-202ENST00000336916 CDK5RAP3Q96JB5 506 aa14.69□□□□□ -0.06
FN1-202ENST00000336916 ARGLU1Q9NWB6 273 aaPredicted RBP14.68□□□□□ -0.06
FN1-202ENST00000336916 CCDC158Q5M9N0 1113 aa14.68□□□□□ -0.06
FN1-202ENST00000336916 THOC2Q8NI27 1593 aaKnown RBP14.68□□□□□ -0.06
FN1-202ENST00000336916 LRPPRCP42704 1394 aaKnown RBP14.68□□□□□ -0.06
FN1-202ENST00000336916 SMARCE1Q969G3 411 aa14.68□□□□□ -0.06
FN1-202ENST00000336916 STIM1Q13586 685 aa14.67□□□□□ -0.06
FN1-202ENST00000336916 PROSER2Q86WR7 435 aaPredicted RBP14.67□□□□□ -0.06
FN1-202ENST00000336916 POLA1P09884 1462 aaPredicted RBP14.67□□□□□ -0.06
FN1-202ENST00000336916 APAF1O14727 1248 aa14.67□□□□□ -0.06
FN1-202ENST00000336916 ZRSR2Q15696 482 aaKnown RBP14.67□□□□□ -0.06
FN1-202ENST00000336916 WASHC4Q2M389 1173 aa14.67□□□□□ -0.06
FN1-202ENST00000336916 KIF1BO60333 1816 aa14.67□□□□□ -0.06
FN1-202ENST00000336916 EIF2AK4Q9P2K8 1649 aaKnown RBP14.67□□□□□ -0.06
FN1-202ENST00000336916 SYCP1Q15431 976 aa14.66□□□□□ -0.06
FN1-202ENST00000336916 ZNF396Q96N95 335 aaPredicted RBP14.66□□□□□ -0.06
FN1-202ENST00000336916 GNAI2P04899 355 aa14.66□□□□□ -0.06
FN1-202ENST00000336916 DCTN1Q14203 1278 aa14.66□□□□□ -0.06
FN1-202ENST00000336916 ESCO1Q5FWF5 840 aa14.66□□□□□ -0.06
FN1-202ENST00000336916 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.66□□□□□ -0.06
FN1-202ENST00000336916 RRP12Q5JTH9 1297 aaKnown RBP14.66□□□□□ -0.06
FN1-202ENST00000336916 CDKL5O76039 1030 aa14.66□□□□□ -0.06
FN1-202ENST00000336916 HOMER1Q86YM7 354 aa14.66□□□□□ -0.06
FN1-202ENST00000336916 KCNH5Q8NCM2 988 aa14.66□□□□□ -0.06
FN1-202ENST00000336916 NEUROD6Q96NK8 337 aa14.66□□□□□ -0.06
FN1-202ENST00000336916 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.65□□□□□ -0.06
FN1-202ENST00000336916 FILIP1LQ4L180 1135 aa14.65□□□□□ -0.06
FN1-202ENST00000336916 ERCC4Q92889 916 aaPredicted RBP14.65□□□□□ -0.06
FN1-202ENST00000336916 CDC45O75419 566 aa14.65□□□□□ -0.06
FN1-202ENST00000336916 CCAR2Q8N163 923 aaKnown RBP14.65□□□□□ -0.06
FN1-202ENST00000336916 MAGEC2Q9UBF1 373 aaPredicted RBP14.65□□□□□ -0.06
FN1-202ENST00000336916 ELL2O00472 640 aaPredicted RBP14.64□□□□□ -0.07
FN1-202ENST00000336916 TRIM22Q8IYM9 498 aa14.64□□□□□ -0.07
FN1-202ENST00000336916 KIAA0586Q9BVV6 1533 aa14.64□□□□□ -0.07
FN1-202ENST00000336916 KINO60870 393 aaKnown RBP14.64□□□□□ -0.07
FN1-202ENST00000336916 GCC1Q96CN9 775 aa14.64□□□□□ -0.07
FN1-202ENST00000336916 RTEL1-TNFRSF6BF6WH68 1400 aa14.64□□□□□ -0.07
FN1-202ENST00000336916 DACH1Q9UI36 760 aa14.64□□□□□ -0.07
FN1-202ENST00000336916 RUSC2Q8N2Y8 1516 aa14.63□□□□□ -0.07
FN1-202ENST00000336916 MBD3O95983 291 aa14.63□□□□□ -0.07
FN1-202ENST00000336916 PBRM1Q86U86 1689 aa14.63□□□□□ -0.07
FN1-202ENST00000336916 DMRT2Q9Y5R5 561 aa14.63□□□□□ -0.07
FN1-202ENST00000336916 CNNM1Q9NRU3 951 aa14.63□□□□□ -0.07
FN1-202ENST00000336916 CABP4P57796 275 aa14.63□□□□□ -0.07
FN1-202ENST00000336916 MAP3K1Q13233 1512 aa14.63□□□□□ -0.07
FN1-202ENST00000336916 MPHOSPH8Q99549 860 aa14.62□□□□□ -0.07
FN1-202ENST00000336916 PDE4CQ08493 712 aa14.62□□□□□ -0.07
FN1-202ENST00000336916 COG6Q9Y2V7 657 aa14.62□□□□□ -0.07
FN1-202ENST00000336916 BCL2L13Q9BXK5 485 aa14.62□□□□□ -0.07
FN1-202ENST00000336916 CFAP74Q9C0B2 1584 aa14.62□□□□□ -0.07
FN1-202ENST00000336916 STARD3NLO95772 234 aa14.62□□□□□ -0.07
FN1-202ENST00000336916 CCDC57Q2TAC2 916 aa14.61□□□□□ -0.07
FN1-202ENST00000336916 MTERF4Q7Z6M4 381 aaKnown RBP14.61□□□□□ -0.07
FN1-202ENST00000336916 ERLIN2O94905 339 aa14.61□□□□□ -0.07
FN1-202ENST00000336916 PCF11O94913 1555 aaKnown RBP14.61□□□□□ -0.07
FN1-202ENST00000336916 NAP1L1P55209 391 aaKnown RBP14.61□□□□□ -0.07
FN1-202ENST00000336916 TMEM132AQ24JP5 1023 aa14.61□□□□□ -0.07
FN1-202ENST00000336916 HSP90B2PQ58FF3 399 aa14.61□□□□□ -0.07
FN1-202ENST00000336916 RSPH6AQ9H0K4 717 aa14.61□□□□□ -0.07
FN1-202ENST00000336916 ERBINQ96RT1 1412 aa14.61□□□□□ -0.07
FN1-202ENST00000336916 PDE4AP27815 886 aa14.61□□□□□ -0.07
FN1-202ENST00000336916 ANKRD18AQ8IVF6 992 aa14.61□□□□□ -0.07
FN1-202ENST00000336916 CRBNQ96SW2 442 aa14.61□□□□□ -0.07
FN1-202ENST00000336916 PPP6R1Q9UPN7 881 aa14.61□□□□□ -0.07
FN1-202ENST00000336916 HSP90AB2PQ58FF8 381 aa14.61□□□□□ -0.07
FN1-202ENST00000336916 IL27Q8NEV9 243 aa14.6□□□□□ -0.07
FN1-202ENST00000336916 TTC39AQ5SRH9 613 aa14.6□□□□□ -0.07
FN1-202ENST00000336916 RAPGEF6Q8TEU7 1601 aa14.6□□□□□ -0.07
FN1-202ENST00000336916 NOM1Q5C9Z4 860 aaKnown RBP14.6□□□□□ -0.07
FN1-202ENST00000336916 FSD1Q9BTV5 496 aa14.6□□□□□ -0.07
FN1-202ENST00000336916 CTNNA3Q9UI47 895 aa14.6□□□□□ -0.07
FN1-202ENST00000336916 ABCA10Q8WWZ4 1543 aa14.6□□□□□ -0.07
FN1-202ENST00000336916 VPS37CA5D8V6 355 aaPredicted RBP14.6□□□□□ -0.07
FN1-202ENST00000336916 TOM1L2Q6ZVM7 507 aa14.6□□□□□ -0.07
FN1-202ENST00000336916 KLHL34Q8N239 644 aa14.6□□□□□ -0.07
FN1-202ENST00000336916 PDE3AQ14432 1141 aa14.59□□□□□ -0.07
FN1-202ENST00000336916 SDF4Q9BRK5 362 aa14.59□□□□□ -0.07
FN1-202ENST00000336916 ZNHIT6Q9NWK9 470 aaKnown RBP14.59□□□□□ -0.07
FN1-202ENST00000336916 ADGBQ8N7X0 1667 aa14.59□□□□□ -0.07
FN1-202ENST00000336916 AEBP1Q8IUX7 1158 aa14.59□□□□□ -0.07
FN1-202ENST00000336916 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.59□□□□□ -0.07
FN1-202ENST00000336916 WDR63Q8IWG1 891 aa14.59□□□□□ -0.07
FN1-202ENST00000336916 HMOX1P09601 288 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms