RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 CDK12Q9NYV4 1490 aaPredicted RBP16.12■□□□□ 0.17
MRPL55-203ENST00000336520 ABCA3Q99758 1704 aa16.12■□□□□ 0.17
MRPL55-203ENST00000336520 ATRNO75882 1429 aa16.11■□□□□ 0.17
MRPL55-203ENST00000336520 BCL9LQ86UU0 1499 aa16.1■□□□□ 0.17
MRPL55-203ENST00000336520 CABP1Q9NZU7 370 aa16.09■□□□□ 0.17
MRPL55-203ENST00000336520 RGS12O14924 1447 aa16.09■□□□□ 0.17
MRPL55-203ENST00000336520 UNC5CLQ8IV45 518 aa16.08■□□□□ 0.16
MRPL55-203ENST00000336520 SLIT2O94813 1529 aa16.08■□□□□ 0.16
MRPL55-203ENST00000336520 NUTM2GQ5VZR2 741 aa16.07■□□□□ 0.16
MRPL55-203ENST00000336520 CLSPNQ9HAW4 1339 aa16.07■□□□□ 0.16
MRPL55-203ENST00000336520 SBNO2Q9Y2G9 1366 aa16.07■□□□□ 0.16
MRPL55-203ENST00000336520 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.06■□□□□ 0.16
MRPL55-203ENST00000336520 PLCH1Q4KWH8 1693 aa16.06■□□□□ 0.16
MRPL55-203ENST00000336520 ATAD2Q6PL18 1390 aa16.06■□□□□ 0.16
MRPL55-203ENST00000336520 ABTB2Q8N961 1025 aa16.06■□□□□ 0.16
MRPL55-203ENST00000336520 FAM83GA6ND36 823 aa16.05■□□□□ 0.16
MRPL55-203ENST00000336520 GJD4Q96KN9 370 aaPredicted RBP16.04■□□□□ 0.16
MRPL55-203ENST00000336520 PRDM11Q9NQV5 511 aa16.04■□□□□ 0.16
MRPL55-203ENST00000336520 CCDC9Q9Y3X0 531 aaKnown RBP16.04■□□□□ 0.16
MRPL55-203ENST00000336520 NWD2Q9ULI1 1742 aa16.04■□□□□ 0.16
MRPL55-203ENST00000336520 CRYBG1Q9Y4K1 1723 aa16.04■□□□□ 0.16
MRPL55-203ENST00000336520 USP6P35125 1406 aa16.03■□□□□ 0.16
MRPL55-203ENST00000336520 BRD4O60885 1362 aaPredicted RBP16.03■□□□□ 0.16
MRPL55-203ENST00000336520 CCER1Q8TC90 406 aaPredicted RBP16.03■□□□□ 0.16
MRPL55-203ENST00000336520 COL14A1Q05707 1796 aaKnown RBP16.03■□□□□ 0.16
MRPL55-203ENST00000336520 PHRF1Q9P1Y6 1649 aaKnown RBP16.02■□□□□ 0.16
MRPL55-203ENST00000336520 BTG4Q9NY30 223 aa16.02■□□□□ 0.16
MRPL55-203ENST00000336520 TIMELESSQ9UNS1 1208 aa16.02■□□□□ 0.16
MRPL55-203ENST00000336520 KIAA0232Q92628 1395 aa16.01■□□□□ 0.15
MRPL55-203ENST00000336520 VPS72Q15906 364 aa16.01■□□□□ 0.15
MRPL55-203ENST00000336520 NLRP13Q86W25 1043 aa16.01■□□□□ 0.15
MRPL55-203ENST00000336520 ST20-MTHFSA0A0A6YYL1 179 aa16■□□□□ 0.15
MRPL55-203ENST00000336520 ZC3H6P61129 1189 aaKnown RBP16■□□□□ 0.15
MRPL55-203ENST00000336520 GLI3P10071 1580 aa16■□□□□ 0.15
MRPL55-203ENST00000336520 USP19O94966 1318 aa15.99■□□□□ 0.15
MRPL55-203ENST00000336520 CHRNA2Q15822 529 aa15.99■□□□□ 0.15
MRPL55-203ENST00000336520 TMC1Q8TDI8 760 aa15.99■□□□□ 0.15
MRPL55-203ENST00000336520 UPF1Q92900 1129 aaKnown RBP eCLIP15.99■□□□□ 0.15
MRPL55-203ENST00000336520 ZNF692Q9BU19 519 aaPredicted RBP15.99■□□□□ 0.15
MRPL55-203ENST00000336520 USP47Q96K76 1375 aa15.99■□□□□ 0.15
MRPL55-203ENST00000336520 NLRP6P59044 892 aa15.98■□□□□ 0.15
MRPL55-203ENST00000336520 NRKQ7Z2Y5 1582 aa15.98■□□□□ 0.15
MRPL55-203ENST00000336520 NRAPQ86VF7 1730 aa15.98■□□□□ 0.15
MRPL55-203ENST00000336520 KTN1Q86UP2 1357 aaKnown RBP15.98■□□□□ 0.15
MRPL55-203ENST00000336520 AKAP12Q02952 1782 aa15.97■□□□□ 0.15
MRPL55-203ENST00000336520 TTC21BQ7Z4L5 1316 aa15.96■□□□□ 0.15
MRPL55-203ENST00000336520 CPSF1Q10570 1443 aaKnown RBP15.96■□□□□ 0.15
MRPL55-203ENST00000336520 SSH2Q76I76 1423 aa15.96■□□□□ 0.15
MRPL55-203ENST00000336520 A0A0G2JS52 829 aa15.96■□□□□ 0.15
MRPL55-203ENST00000336520 SLC24A1O60721 1099 aa15.96■□□□□ 0.15
MRPL55-203ENST00000336520 MYT1Q01538 1121 aa15.96■□□□□ 0.15
MRPL55-203ENST00000336520 TESK2Q96S53 571 aa15.96■□□□□ 0.15
MRPL55-203ENST00000336520 GCP02774 474 aa15.95■□□□□ 0.14
MRPL55-203ENST00000336520 HDGFL2Q7Z4V5 671 aaPredicted RBP15.95■□□□□ 0.14
MRPL55-203ENST00000336520 STRN4Q9NRL3 753 aa15.95■□□□□ 0.14
MRPL55-203ENST00000336520 PIK3C2AO00443 1686 aa15.95■□□□□ 0.14
MRPL55-203ENST00000336520 TTC21AQ8NDW8 1320 aa15.94■□□□□ 0.14
MRPL55-203ENST00000336520 ZBTB7CA1YPR0 619 aa15.94■□□□□ 0.14
MRPL55-203ENST00000336520 SEPT12Q8IYM1 358 aa15.94■□□□□ 0.14
MRPL55-203ENST00000336520 PUS7Q96PZ0 661 aaKnown RBP15.94■□□□□ 0.14
MRPL55-203ENST00000336520 CPDO75976 1380 aa15.94■□□□□ 0.14
MRPL55-203ENST00000336520 SLC12A5Q9H2X9 1139 aa15.93■□□□□ 0.14
MRPL55-203ENST00000336520 TERF2IPQ9NYB0 399 aa15.93■□□□□ 0.14
MRPL55-203ENST00000336520 MON2Q7Z3U7 1717 aa15.93■□□□□ 0.14
MRPL55-203ENST00000336520 EVA1CP58658 441 aa15.92■□□□□ 0.14
MRPL55-203ENST00000336520 FAM98CQ17RN3 349 aaKnown RBP15.92■□□□□ 0.14
MRPL55-203ENST00000336520 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.92■□□□□ 0.14
MRPL55-203ENST00000336520 SLIT3O75094 1523 aa15.92■□□□□ 0.14
MRPL55-203ENST00000336520 SPATA31A5Q5VU36 1347 aa15.92■□□□□ 0.14
MRPL55-203ENST00000336520 SPATA31A7Q8IWB4 1347 aa15.92■□□□□ 0.14
MRPL55-203ENST00000336520 TMF1P82094 1093 aa15.91■□□□□ 0.14
MRPL55-203ENST00000336520 CD163L1Q9NR16 1453 aa15.91■□□□□ 0.14
MRPL55-203ENST00000336520 NINLQ9Y2I6 1382 aa15.9■□□□□ 0.14
MRPL55-203ENST00000336520 SOX12O15370 315 aa15.9■□□□□ 0.14
MRPL55-203ENST00000336520 ONECUT3O60422 494 aaPredicted RBP15.9■□□□□ 0.14
MRPL55-203ENST00000336520 CAMTA1Q9Y6Y1 1673 aa15.89■□□□□ 0.13
MRPL55-203ENST00000336520 A0A1W2PP64 1363 aa15.89■□□□□ 0.13
MRPL55-203ENST00000336520 EDC4Q6P2E9 1401 aaKnown RBP15.89■□□□□ 0.13
MRPL55-203ENST00000336520 KCNH5Q8NCM2 988 aa15.89■□□□□ 0.13
MRPL55-203ENST00000336520 LMO7Q8WWI1 1683 aa15.89■□□□□ 0.13
MRPL55-203ENST00000336520 KRT27Q7Z3Y8 459 aa15.88■□□□□ 0.13
MRPL55-203ENST00000336520 NME9Q86XW9 330 aa15.88■□□□□ 0.13
MRPL55-203ENST00000336520 USP35Q9P2H5 1018 aa15.88■□□□□ 0.13
MRPL55-203ENST00000336520 BRWD3Q6RI45 1802 aa15.88■□□□□ 0.13
MRPL55-203ENST00000336520 SPATA31A1Q5TZJ5 1347 aa15.88■□□□□ 0.13
MRPL55-203ENST00000336520 AATKQ6ZMQ8 1374 aa15.87■□□□□ 0.13
MRPL55-203ENST00000336520 CDCA8Q53HL2 280 aa15.87■□□□□ 0.13
MRPL55-203ENST00000336520 LARP1Q6PKG0 1096 aaKnown RBP15.86■□□□□ 0.13
MRPL55-203ENST00000336520 ZRANB1Q9UGI0 708 aa15.86■□□□□ 0.13
MRPL55-203ENST00000336520 COL5A2P05997 1499 aaPredicted RBP15.85■□□□□ 0.13
MRPL55-203ENST00000336520 USP31Q70CQ4 1352 aa15.85■□□□□ 0.13
MRPL55-203ENST00000336520 ARHGEF25Q86VW2 580 aa15.84■□□□□ 0.13
MRPL55-203ENST00000336520 NFAT5O94916 1531 aa15.84■□□□□ 0.13
MRPL55-203ENST00000336520 THSD7AQ9UPZ6 1657 aa15.83■□□□□ 0.13
MRPL55-203ENST00000336520 EP400Q96L91 3159 aa15.83■□□□□ 0.12
MRPL55-203ENST00000336520 CCDC125Q86Z20 511 aa15.83■□□□□ 0.12
MRPL55-203ENST00000336520 TCP11L2Q8N4U5 519 aa15.83■□□□□ 0.12
MRPL55-203ENST00000336520 ANKRD36BQ8N2N9 1353 aa15.83■□□□□ 0.12
MRPL55-203ENST00000336520 CRB1P82279 1406 aa15.82■□□□□ 0.12
MRPL55-203ENST00000336520 USP54Q70EL1 1684 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms