RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 EID1Q9Y6B2 187 aa16.4■□□□□ 0.22
LIMK1-201ENST00000336180 MSH5O43196 834 aa16.4■□□□□ 0.22
LIMK1-201ENST00000336180 DIAPH1O60610 1272 aaKnown RBP16.4■□□□□ 0.22
LIMK1-201ENST00000336180 PODXL2Q9NZ53 605 aa16.4■□□□□ 0.22
LIMK1-201ENST00000336180 POLKQ9UBT6 870 aa16.4■□□□□ 0.22
LIMK1-201ENST00000336180 TCERG1O14776 1098 aaKnown RBP16.39■□□□□ 0.21
LIMK1-201ENST00000336180 HDGFP51858 240 aaKnown RBP16.39■□□□□ 0.21
LIMK1-201ENST00000336180 REREQ9P2R6 1566 aa16.38■□□□□ 0.21
LIMK1-201ENST00000336180 MAPK8IP3Q9UPT6 1336 aa16.38■□□□□ 0.21
LIMK1-201ENST00000336180 CCDC61Q9Y6R9 512 aa16.38■□□□□ 0.21
LIMK1-201ENST00000336180 PRKAR2BP31323 418 aa16.37■□□□□ 0.21
LIMK1-201ENST00000336180 RIPK4P57078 832 aa16.37■□□□□ 0.21
LIMK1-201ENST00000336180 PHACTR3Q96KR7 559 aa16.37■□□□□ 0.21
LIMK1-201ENST00000336180 ELL2O00472 640 aaPredicted RBP16.36■□□□□ 0.21
LIMK1-201ENST00000336180 TRMT2AQ8IZ69 625 aaKnown RBP16.36■□□□□ 0.21
LIMK1-201ENST00000336180 NRXN3Q9Y4C0 1643 aa16.35■□□□□ 0.21
LIMK1-201ENST00000336180 TMPOP42166 694 aaKnown RBP16.35■□□□□ 0.21
LIMK1-201ENST00000336180 RGS3P49796 1198 aa16.35■□□□□ 0.21
LIMK1-201ENST00000336180 C14orf37Q86TY3 774 aa16.35■□□□□ 0.21
LIMK1-201ENST00000336180 PUS7Q96PZ0 661 aaKnown RBP16.35■□□□□ 0.21
LIMK1-201ENST00000336180 SHPRHQ149N8 1683 aa16.34■□□□□ 0.21
LIMK1-201ENST00000336180 ACEP12821 1306 aa16.34■□□□□ 0.21
LIMK1-201ENST00000336180 ADAMTS13Q76LX8 1427 aa16.34■□□□□ 0.21
LIMK1-201ENST00000336180 DCTN1Q14203 1278 aa16.34■□□□□ 0.21
LIMK1-201ENST00000336180 COG3Q96JB2 828 aa16.34■□□□□ 0.21
LIMK1-201ENST00000336180 PTPRUQ92729 1446 aa16.34■□□□□ 0.21
LIMK1-201ENST00000336180 NKTRP30414 1462 aaKnown RBP16.34■□□□□ 0.21
LIMK1-201ENST00000336180 KCNA6P17658 529 aa16.33■□□□□ 0.21
LIMK1-201ENST00000336180 EXOSC9Q06265 439 aaKnown RBP16.33■□□□□ 0.21
LIMK1-201ENST00000336180 ZBTB7CA1YPR0 619 aa16.33■□□□□ 0.2
LIMK1-201ENST00000336180 RLBP1P12271 317 aa16.32■□□□□ 0.2
LIMK1-201ENST00000336180 PLEKHF1Q96S99 279 aa16.32■□□□□ 0.2
LIMK1-201ENST00000336180 TRIM35Q9UPQ4 493 aa16.32■□□□□ 0.2
LIMK1-201ENST00000336180 NLRP1Q9C000 1473 aa16.32■□□□□ 0.2
LIMK1-201ENST00000336180 FAM83GA6ND36 823 aa16.32■□□□□ 0.2
LIMK1-201ENST00000336180 AEBP1Q8IUX7 1158 aa16.32■□□□□ 0.2
LIMK1-201ENST00000336180 CPS1P31327 1500 aa16.32■□□□□ 0.2
LIMK1-201ENST00000336180 INSRP06213 1382 aa16.31■□□□□ 0.2
LIMK1-201ENST00000336180 PAK3O75914 559 aaPredicted RBP16.31■□□□□ 0.2
LIMK1-201ENST00000336180 NGDNQ8NEJ9 315 aaKnown RBP16.31■□□□□ 0.2
LIMK1-201ENST00000336180 NSD2O96028 1365 aa16.31■□□□□ 0.2
LIMK1-201ENST00000336180 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.3■□□□□ 0.2
LIMK1-201ENST00000336180 RARSP54136 660 aaKnown RBP16.3■□□□□ 0.2
LIMK1-201ENST00000336180 THEMISQ8N1K5 641 aaPredicted RBP16.29■□□□□ 0.2
LIMK1-201ENST00000336180 FANCIQ9NVI1 1328 aa16.29■□□□□ 0.2
LIMK1-201ENST00000336180 NINLQ9Y2I6 1382 aa16.28■□□□□ 0.2
LIMK1-201ENST00000336180 XPCQ01831 940 aaPredicted RBP16.28■□□□□ 0.2
LIMK1-201ENST00000336180 HSP90AB2PQ58FF8 381 aa16.28■□□□□ 0.2
LIMK1-201ENST00000336180 PKNOX2Q96KN3 472 aa16.28■□□□□ 0.2
LIMK1-201ENST00000336180 SETD1AO15047 1707 aaKnown RBP16.28■□□□□ 0.2
LIMK1-201ENST00000336180 UBR1Q8IWV7 1749 aa16.28■□□□□ 0.2
LIMK1-201ENST00000336180 IGHDP01880 384 aa16.27■□□□□ 0.2
LIMK1-201ENST00000336180 LTV1Q96GA3 475 aaPredicted RBP16.27■□□□□ 0.2
LIMK1-201ENST00000336180 RSPH6AQ9H0K4 717 aa16.26■□□□□ 0.19
LIMK1-201ENST00000336180 SMC4Q9NTJ3 1288 aa16.26■□□□□ 0.19
LIMK1-201ENST00000336180 TTC21BQ7Z4L5 1316 aa16.26■□□□□ 0.19
LIMK1-201ENST00000336180 IQSEC2Q5JU85 1478 aa16.25■□□□□ 0.19
LIMK1-201ENST00000336180 PLEKHG1Q9ULL1 1385 aa16.25■□□□□ 0.19
LIMK1-201ENST00000336180 SULT6B1Q6IMI4 303 aa16.25■□□□□ 0.19
LIMK1-201ENST00000336180 WDR63Q8IWG1 891 aa16.24■□□□□ 0.19
LIMK1-201ENST00000336180 NEFMP07197 916 aa16.24■□□□□ 0.19
LIMK1-201ENST00000336180 IL13P35225 146 aa16.24■□□□□ 0.19
LIMK1-201ENST00000336180 PHF23Q9BUL5 403 aaPredicted RBP16.24■□□□□ 0.19
LIMK1-201ENST00000336180 MYH16Q9H6N6 1097 aa16.24■□□□□ 0.19
LIMK1-201ENST00000336180 CPSF1Q10570 1443 aaKnown RBP16.24■□□□□ 0.19
LIMK1-201ENST00000336180 COL3A1P02461 1466 aaPredicted RBP16.24■□□□□ 0.19
LIMK1-201ENST00000336180 ATP7BP35670 1465 aa16.23■□□□□ 0.19
LIMK1-201ENST00000336180 C3P01024 1663 aa16.23■□□□□ 0.19
LIMK1-201ENST00000336180 SSH1Q8WYL5 1049 aa16.23■□□□□ 0.19
LIMK1-201ENST00000336180 PDE4AP27815 886 aa16.23■□□□□ 0.19
LIMK1-201ENST00000336180 LMOD2Q6P5Q4 547 aa16.23■□□□□ 0.19
LIMK1-201ENST00000336180 DLC1Q96QB1 1528 aa16.22■□□□□ 0.19
LIMK1-201ENST00000336180 EDC4Q6P2E9 1401 aaKnown RBP16.22■□□□□ 0.19
LIMK1-201ENST00000336180 KRT24Q2M2I5 525 aa16.22■□□□□ 0.19
LIMK1-201ENST00000336180 TSPYL6Q8N831 410 aa16.22■□□□□ 0.19
LIMK1-201ENST00000336180 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.22■□□□□ 0.19
LIMK1-201ENST00000336180 MIS18AQ9NYP9 233 aa16.22■□□□□ 0.19
LIMK1-201ENST00000336180 USP32Q8NFA0 1604 aa16.22■□□□□ 0.19
LIMK1-201ENST00000336180 EIF4A2Q14240 407 aaKnown RBP16.21■□□□□ 0.19
LIMK1-201ENST00000336180 NLRP6P59044 892 aa16.21■□□□□ 0.19
LIMK1-201ENST00000336180 FOXO3O43524 673 aa16.21■□□□□ 0.18
LIMK1-201ENST00000336180 MCM10Q7L590 875 aa16.2■□□□□ 0.18
LIMK1-201ENST00000336180 FTSJ3Q8IY81 847 aaKnown RBP16.2■□□□□ 0.18
LIMK1-201ENST00000336180 NOB1Q9ULX3 412 aaKnown RBP16.2■□□□□ 0.18
LIMK1-201ENST00000336180 TBX22Q9Y458 520 aa16.2■□□□□ 0.18
LIMK1-201ENST00000336180 PCDHB15Q9Y5E8 787 aa16.2■□□□□ 0.18
LIMK1-201ENST00000336180 FAM135BQ49AJ0 1406 aa16.19■□□□□ 0.18
LIMK1-201ENST00000336180 FCHSD2O94868 740 aa16.19■□□□□ 0.18
LIMK1-201ENST00000336180 FER1L4A9Z1Z3 1794 aa16.19■□□□□ 0.18
LIMK1-201ENST00000336180 MAP2P11137 1827 aaKnown RBP16.18■□□□□ 0.18
LIMK1-201ENST00000336180 ITPRIPQ8IWB1 547 aa16.18■□□□□ 0.18
LIMK1-201ENST00000336180 USHBP1Q8N6Y0 703 aa16.18■□□□□ 0.18
LIMK1-201ENST00000336180 ZNF692Q9BU19 519 aaPredicted RBP16.18■□□□□ 0.18
LIMK1-201ENST00000336180 LRRC7Q96NW7 1537 aa16.18■□□□□ 0.18
LIMK1-201ENST00000336180 KDM2BQ8NHM5 1336 aa16.18■□□□□ 0.18
LIMK1-201ENST00000336180 PNPLA6Q8IY17 1366 aa16.17■□□□□ 0.18
LIMK1-201ENST00000336180 NFE2L2Q16236 605 aa16.17■□□□□ 0.18
LIMK1-201ENST00000336180 CCDC27Q2M243 656 aa16.17■□□□□ 0.18
LIMK1-201ENST00000336180 AMPHP49418 695 aa16.17■□□□□ 0.18
LIMK1-201ENST00000336180 ANKLE2Q86XL3 938 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms