RNA–Protein interactions for RNA: ENST00000335503.3

CCT6A-202, Transcript of chaperonin containing TCP1 subunit 6A, humanhuman

TSL 5 BASIC

Gene CCT6A, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6A-202ENST00000335503 SHPRHQ149N8 1683 aa22.41■■□□□ 1.18
CCT6A-202ENST00000335503 BLMP54132 1417 aaPredicted RBP22.4■■□□□ 1.18
CCT6A-202ENST00000335503 WDR43Q15061 677 aaKnown RBP eCLIP22.4■■□□□ 1.18
CCT6A-202ENST00000335503 C14orf37Q86TY3 774 aa22.39■■□□□ 1.18
CCT6A-202ENST00000335503 PROSER2Q86WR7 435 aaPredicted RBP22.39■■□□□ 1.18
CCT6A-202ENST00000335503 PMFBP1Q8TBY8 1022 aa22.37■■□□□ 1.17
CCT6A-202ENST00000335503 MTHFSP49914 203 aa22.37■■□□□ 1.17
CCT6A-202ENST00000335503 NME9Q86XW9 330 aa22.37■■□□□ 1.17
CCT6A-202ENST00000335503 MAP2P11137 1827 aaKnown RBP22.36■■□□□ 1.17
CCT6A-202ENST00000335503 NGDNQ8NEJ9 315 aaKnown RBP22.35■■□□□ 1.17
CCT6A-202ENST00000335503 RBM19Q9Y4C8 960 aaKnown RBP22.35■■□□□ 1.17
CCT6A-202ENST00000335503 TTC21BQ7Z4L5 1316 aa22.35■■□□□ 1.17
CCT6A-202ENST00000335503 SSH2Q76I76 1423 aa22.35■■□□□ 1.17
CCT6A-202ENST00000335503 CFAP53Q96M91 514 aa22.35■■□□□ 1.17
CCT6A-202ENST00000335503 ADAMTS8Q9UP79 889 aa22.35■■□□□ 1.17
CCT6A-202ENST00000335503 COG3Q96JB2 828 aa22.32■■□□□ 1.16
CCT6A-202ENST00000335503 NCOA3Q9Y6Q9 1424 aa22.32■■□□□ 1.16
CCT6A-202ENST00000335503 NEFLP07196 543 aa22.32■■□□□ 1.16
CCT6A-202ENST00000335503 TTC21AQ8NDW8 1320 aa22.31■■□□□ 1.16
CCT6A-202ENST00000335503 TMEM94Q12767 1356 aa22.31■■□□□ 1.16
CCT6A-202ENST00000335503 XIRP1Q702N8 1843 aaKnown RBP22.31■■□□□ 1.16
CCT6A-202ENST00000335503 ZRANB1Q9UGI0 708 aa22.31■■□□□ 1.16
CCT6A-202ENST00000335503 PIK3C2AO00443 1686 aa22.3■■□□□ 1.16
CCT6A-202ENST00000335503 OVOS2A0A0J9YW53 1432 aa22.3■■□□□ 1.16
CCT6A-202ENST00000335503 OVOS2Q6IE36 1432 aa22.3■■□□□ 1.16
CCT6A-202ENST00000335503 PHF8Q9UPP1 1060 aa22.3■■□□□ 1.16
CCT6A-202ENST00000335503 COL3A1P02461 1466 aaPredicted RBP22.3■■□□□ 1.16
CCT6A-202ENST00000335503 C19orf44Q9H6X5 657 aa22.29■■□□□ 1.16
CCT6A-202ENST00000335503 DCCP43146 1447 aa22.29■■□□□ 1.16
CCT6A-202ENST00000335503 AATKQ6ZMQ8 1374 aa22.28■■□□□ 1.16
CCT6A-202ENST00000335503 KIF1AQ12756 1690 aa22.28■■□□□ 1.16
CCT6A-202ENST00000335503 USP54Q70EL1 1684 aa22.27■■□□□ 1.16
CCT6A-202ENST00000335503 SENP3-EIF4A1A0A087X0R7 540 aa22.27■■□□□ 1.16
CCT6A-202ENST00000335503 SMG6Q86US8 1419 aaKnown RBP22.26■■□□□ 1.15
CCT6A-202ENST00000335503 ESCO1Q5FWF5 840 aa22.26■■□□□ 1.15
CCT6A-202ENST00000335503 MARF1Q9Y4F3 1742 aaKnown RBP22.24■■□□□ 1.15
CCT6A-202ENST00000335503 PNPLA6Q8IY17 1366 aa22.24■■□□□ 1.15
CCT6A-202ENST00000335503 CDK12Q9NYV4 1490 aaPredicted RBP22.24■■□□□ 1.15
CCT6A-202ENST00000335503 POLKQ9UBT6 870 aa22.24■■□□□ 1.15
CCT6A-202ENST00000335503 C1orf167Q5SNV9 1468 aa22.23■■□□□ 1.15
CCT6A-202ENST00000335503 USP31Q70CQ4 1352 aa22.23■■□□□ 1.15
CCT6A-202ENST00000335503 ATF3P18847 181 aa22.22■■□□□ 1.15
CCT6A-202ENST00000335503 FBLN1P23142 703 aa22.22■■□□□ 1.15
CCT6A-202ENST00000335503 MST1RQ04912 1400 aa22.21■■□□□ 1.15
CCT6A-202ENST00000335503 LRRC7Q96NW7 1537 aa22.21■■□□□ 1.15
CCT6A-202ENST00000335503 MSH6P52701 1360 aa22.21■■□□□ 1.15
CCT6A-202ENST00000335503 ZNF335Q9H4Z2 1342 aaPredicted RBP22.21■■□□□ 1.15
CCT6A-202ENST00000335503 CCDC146Q8IYE0 955 aa22.2■■□□□ 1.14
CCT6A-202ENST00000335503 ORAI2Q96SN7 254 aa22.2■■□□□ 1.14
CCT6A-202ENST00000335503 PPM1GO15355 546 aaPredicted RBP22.19■■□□□ 1.14
CCT6A-202ENST00000335503 NUDCQ9Y266 331 aa22.19■■□□□ 1.14
CCT6A-202ENST00000335503 SALL2Q9Y467 1007 aaPredicted RBP22.19■■□□□ 1.14
CCT6A-202ENST00000335503 EMILIN1Q9Y6C2 1016 aa22.19■■□□□ 1.14
CCT6A-202ENST00000335503 DMRT2Q9Y5R5 561 aa22.19■■□□□ 1.14
CCT6A-202ENST00000335503 DIAPH1O60610 1272 aaKnown RBP22.18■■□□□ 1.14
CCT6A-202ENST00000335503 TRPM3Q9HCF6 1732 aaPredicted RBP22.17■■□□□ 1.14
CCT6A-202ENST00000335503 PAK3O75914 559 aaPredicted RBP22.17■■□□□ 1.14
CCT6A-202ENST00000335503 PSME1Q06323 249 aa22.17■■□□□ 1.14
CCT6A-202ENST00000335503 RRS1Q15050 365 aaKnown RBP22.17■■□□□ 1.14
CCT6A-202ENST00000335503 CADPS2Q86UW7 1296 aa22.17■■□□□ 1.14
CCT6A-202ENST00000335503 U2AF1L5P0DN76 240 aaPredicted RBP22.16■■□□□ 1.14
CCT6A-202ENST00000335503 U2AF1Q01081 240 aaKnown RBP eCLIP22.16■■□□□ 1.14
CCT6A-202ENST00000335503 PEAK1Q9H792 1746 aa22.16■■□□□ 1.14
CCT6A-202ENST00000335503 U2SURPO15042 1029 aaKnown RBP22.15■■□□□ 1.14
CCT6A-202ENST00000335503 NLRP6P59044 892 aa22.15■■□□□ 1.14
CCT6A-202ENST00000335503 ABTB2Q8N961 1025 aa22.15■■□□□ 1.14
CCT6A-202ENST00000335503 IQSEC2Q5JU85 1478 aa22.14■■□□□ 1.14
CCT6A-202ENST00000335503 PDE3BQ13370 1112 aa22.14■■□□□ 1.13
CCT6A-202ENST00000335503 RUNDC1Q96C34 613 aa22.14■■□□□ 1.13
CCT6A-202ENST00000335503 APAF1O14727 1248 aa22.13■■□□□ 1.13
CCT6A-202ENST00000335503 FOXO3O43524 673 aa22.13■■□□□ 1.13
CCT6A-202ENST00000335503 MSH5O43196 834 aa22.13■■□□□ 1.13
CCT6A-202ENST00000335503 NUTM2GQ5VZR2 741 aa22.11■■□□□ 1.13
CCT6A-202ENST00000335503 NGEFQ8N5V2 710 aa22.11■■□□□ 1.13
CCT6A-202ENST00000335503 SOX12O15370 315 aa22.1■■□□□ 1.13
CCT6A-202ENST00000335503 LTN1O94822 1766 aa22.09■■□□□ 1.13
CCT6A-202ENST00000335503 ALS2Q96Q42 1657 aa22.09■■□□□ 1.13
CCT6A-202ENST00000335503 XPCQ01831 940 aaPredicted RBP22.08■■□□□ 1.13
CCT6A-202ENST00000335503 ZNF521Q96K83 1311 aa22.08■■□□□ 1.13
CCT6A-202ENST00000335503 MAP3K19Q56UN5 1328 aa22.07■■□□□ 1.12
CCT6A-202ENST00000335503 SBNO1A3KN83 1393 aa22.07■■□□□ 1.12
CCT6A-202ENST00000335503 IL13P35225 146 aa22.07■■□□□ 1.12
CCT6A-202ENST00000335503 KRT28Q7Z3Y7 464 aa22.07■■□□□ 1.12
CCT6A-202ENST00000335503 TCP11L2Q8N4U5 519 aa22.06■■□□□ 1.12
CCT6A-202ENST00000335503 NFAT5O94916 1531 aa22.05■■□□□ 1.12
CCT6A-202ENST00000335503 FLT4P35916 1363 aa22.05■■□□□ 1.12
CCT6A-202ENST00000335503 PNNQ9H307 717 aaKnown RBP22.05■■□□□ 1.12
CCT6A-202ENST00000335503 RGPD1P0DJD0 1748 aa22.05■■□□□ 1.12
CCT6A-202ENST00000335503 PLEKHF1Q96S99 279 aa22.05■■□□□ 1.12
CCT6A-202ENST00000335503 CDCA7LQ96GN5 454 aa22.04■■□□□ 1.12
CCT6A-202ENST00000335503 SLIT3O75094 1523 aa22.04■■□□□ 1.12
CCT6A-202ENST00000335503 KIF24Q5T7B8 1368 aa22.03■■□□□ 1.12
CCT6A-202ENST00000335503 FCHSD2O94868 740 aa22.03■■□□□ 1.12
CCT6A-202ENST00000335503 NPHP3Q7Z494 1330 aa22.03■■□□□ 1.12
CCT6A-202ENST00000335503 MAPK8IP3Q9UPT6 1336 aa22.03■■□□□ 1.12
CCT6A-202ENST00000335503 PHRF1Q9P1Y6 1649 aaKnown RBP22.02■■□□□ 1.12
CCT6A-202ENST00000335503 AMPHP49418 695 aa22.02■■□□□ 1.11
CCT6A-202ENST00000335503 GOLGA2Q08379 1002 aa22.02■■□□□ 1.11
CCT6A-202ENST00000335503 EIF4A2Q14240 407 aaKnown RBP22.02■■□□□ 1.11
CCT6A-202ENST00000335503 RSPH6AQ9H0K4 717 aa22.02■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms