RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 MYT1Q01538 1121 aa35.59■■■■□ 3.29
CDKN3-202ENST00000335183 BTG4Q9NY30 223 aa35.59■■■■□ 3.29
CDKN3-202ENST00000335183 CRYBG1Q9Y4K1 1723 aa35.59■■■■□ 3.29
CDKN3-202ENST00000335183 ONECUT3O60422 494 aaPredicted RBP35.57■■■■□ 3.28
CDKN3-202ENST00000335183 SF3B2Q13435 895 aaKnown RBP35.57■■■■□ 3.28
CDKN3-202ENST00000335183 KRT27Q7Z3Y8 459 aa35.57■■■■□ 3.28
CDKN3-202ENST00000335183 ATP7BP35670 1465 aa35.55■■■■□ 3.28
CDKN3-202ENST00000335183 DEFB132Q7Z7B7 95 aa35.55■■■■□ 3.28
CDKN3-202ENST00000335183 FAM98CQ17RN3 349 aaKnown RBP35.52■■■■□ 3.28
CDKN3-202ENST00000335183 NUDT16Q96DE0 195 aaKnown RBP35.52■■■■□ 3.28
CDKN3-202ENST00000335183 KIAA1210Q9ULL0 1709 aa35.5■■■■□ 3.27
CDKN3-202ENST00000335183 CDK19Q9BWU1 502 aa35.47■■■■□ 3.27
CDKN3-202ENST00000335183 PRDM11Q9NQV5 511 aa35.47■■■■□ 3.27
CDKN3-202ENST00000335183 PHRF1Q9P1Y6 1649 aaKnown RBP35.46■■■■□ 3.27
CDKN3-202ENST00000335183 TOPAZ1Q8N9V7 1692 aa35.46■■■■□ 3.27
CDKN3-202ENST00000335183 SPATA31A5Q5VU36 1347 aa35.41■■■■□ 3.26
CDKN3-202ENST00000335183 SPATA31A7Q8IWB4 1347 aa35.41■■■■□ 3.26
CDKN3-202ENST00000335183 KIAA0232Q92628 1395 aa35.39■■■■□ 3.26
CDKN3-202ENST00000335183 NUTM2GQ5VZR2 741 aa35.39■■■■□ 3.26
CDKN3-202ENST00000335183 ACEP12821 1306 aa35.37■■■■□ 3.25
CDKN3-202ENST00000335183 CHRNA2Q15822 529 aa35.37■■■■□ 3.25
CDKN3-202ENST00000335183 NBPF1Q3BBV0 1214 aa35.37■■■■□ 3.25
CDKN3-202ENST00000335183 RGPD1P0DJD0 1748 aa35.37■■■■□ 3.25
CDKN3-202ENST00000335183 THSD7AQ9UPZ6 1657 aa35.37■■■■□ 3.25
CDKN3-202ENST00000335183 BAG6P46379 1132 aa35.36■■■■□ 3.25
CDKN3-202ENST00000335183 CCDC61Q9Y6R9 512 aa35.36■■■■□ 3.25
CDKN3-202ENST00000335183 POLR3AO14802 1390 aaPredicted RBP35.36■■■■□ 3.25
CDKN3-202ENST00000335183 FAM182BQ5T319 152 aa35.35■■■■□ 3.25
CDKN3-202ENST00000335183 ZC3H6P61129 1189 aaKnown RBP35.34■■■■□ 3.25
CDKN3-202ENST00000335183 NBPF8Q3BBV2 869 aa35.34■■■■□ 3.25
CDKN3-202ENST00000335183 STRN4Q9NRL3 753 aa35.34■■■■□ 3.25
CDKN3-202ENST00000335183 SRCAPQ6ZRS2 3230 aa35.33■■■■□ 3.25
CDKN3-202ENST00000335183 PLEKHG3A1L390 1219 aa35.3■■■■□ 3.24
CDKN3-202ENST00000335183 SPATA31A1Q5TZJ5 1347 aa35.29■■■■□ 3.24
CDKN3-202ENST00000335183 SRPK2P78362 688 aaKnown RBP35.28■■■■□ 3.24
CDKN3-202ENST00000335183 NRKQ7Z2Y5 1582 aa35.28■■■■□ 3.24
CDKN3-202ENST00000335183 QRICH2Q9H0J4 1663 aa35.27■■■■□ 3.24
CDKN3-202ENST00000335183 ABTB2Q8N961 1025 aa35.27■■■■□ 3.24
CDKN3-202ENST00000335183 CENPJQ9HC77 1338 aaPredicted RBP35.26■■■■□ 3.23
CDKN3-202ENST00000335183 TNS1Q9HBL0 1735 aaKnown RBP35.25■■■■□ 3.23
CDKN3-202ENST00000335183 PPIP5K1Q6PFW1 1433 aa35.24■■■■□ 3.23
CDKN3-202ENST00000335183 EN1Q05925 392 aaPredicted RBP35.24■■■■□ 3.23
CDKN3-202ENST00000335183 USP35Q9P2H5 1018 aa35.24■■■■□ 3.23
CDKN3-202ENST00000335183 PSDA5PKW4 1024 aaPredicted RBP35.23■■■■□ 3.23
CDKN3-202ENST00000335183 EVA1CP58658 441 aa35.23■■■■□ 3.23
CDKN3-202ENST00000335183 CABP2Q9NPB3 220 aa35.22■■■■□ 3.23
CDKN3-202ENST00000335183 SSH2Q76I76 1423 aa35.2■■■■□ 3.23
CDKN3-202ENST00000335183 LRP5O75197 1615 aa35.2■■■■□ 3.23
CDKN3-202ENST00000335183 CAMTA1Q9Y6Y1 1673 aa35.18■■■■□ 3.22
CDKN3-202ENST00000335183 LMO7Q8WWI1 1683 aa35.17■■■■□ 3.22
CDKN3-202ENST00000335183 USP19O94966 1318 aa35.17■■■■□ 3.22
CDKN3-202ENST00000335183 NLRP13Q86W25 1043 aa35.16■■■■□ 3.22
CDKN3-202ENST00000335183 CPDO75976 1380 aa35.15■■■■□ 3.22
CDKN3-202ENST00000335183 LARP1Q6PKG0 1096 aaKnown RBP35.13■■■■□ 3.21
CDKN3-202ENST00000335183 FAM196AQ6ZSG2 479 aa35.13■■■■□ 3.21
CDKN3-202ENST00000335183 L3MBTL2Q969R5 705 aa35.13■■■■□ 3.21
CDKN3-202ENST00000335183 DISP2A7MBM2 1401 aa35.13■■■■□ 3.21
CDKN3-202ENST00000335183 TRIM37O94972 964 aa35.12■■■■□ 3.21
CDKN3-202ENST00000335183 GCP02774 474 aa35.11■■■■□ 3.21
CDKN3-202ENST00000335183 BARGINQ6ZT62 677 aa35.11■■■■□ 3.21
CDKN3-202ENST00000335183 TRPM1Q7Z4N2 1603 aa35.1■■■■□ 3.21
CDKN3-202ENST00000335183 EZH2Q15910 746 aaKnown RBP35.1■■■■□ 3.21
CDKN3-202ENST00000335183 CABP1Q9NZU7 370 aa35.1■■■■□ 3.21
CDKN3-202ENST00000335183 PDE3BQ13370 1112 aa35.09■■■■□ 3.21
CDKN3-202ENST00000335183 ZBTB7CA1YPR0 619 aa35.08■■■■□ 3.21
CDKN3-202ENST00000335183 TCP11L2Q8N4U5 519 aa35.08■■■■□ 3.21
CDKN3-202ENST00000335183 BRD4O60885 1362 aaPredicted RBP35.08■■■■□ 3.21
CDKN3-202ENST00000335183 USP6P35125 1406 aa35.07■■■■□ 3.21
CDKN3-202ENST00000335183 R3HDM1Q15032 1099 aaKnown RBP35.05■■■■□ 3.2
CDKN3-202ENST00000335183 SIN3AQ96ST3 1273 aa35.05■■■■□ 3.2
CDKN3-202ENST00000335183 COL5A2P05997 1499 aaPredicted RBP35.04■■■■□ 3.2
CDKN3-202ENST00000335183 APBA3O96018 575 aa35.04■■■■□ 3.2
CDKN3-202ENST00000335183 NLRP6P59044 892 aa35.04■■■■□ 3.2
CDKN3-202ENST00000335183 EVC2Q86UK5 1308 aa35.03■■■■□ 3.2
CDKN3-202ENST00000335183 CAMKK2Q96RR4 588 aa35.02■■■■□ 3.2
CDKN3-202ENST00000335183 PARP4Q9UKK3 1724 aaKnown RBP35.02■■■■□ 3.2
CDKN3-202ENST00000335183 NEUROD1Q13562 356 aa35.01■■■■□ 3.2
CDKN3-202ENST00000335183 THRAP3Q9Y2W1 955 aaKnown RBP35.01■■■■□ 3.2
CDKN3-202ENST00000335183 PIK3C2AO00443 1686 aa35.01■■■■□ 3.19
CDKN3-202ENST00000335183 SLIT3O75094 1523 aa35.01■■■■□ 3.19
CDKN3-202ENST00000335183 ROCK2O75116 1388 aaKnown RBP34.99■■■■□ 3.19
CDKN3-202ENST00000335183 RREB1Q92766 1687 aa34.97■■■■□ 3.19
CDKN3-202ENST00000335183 AKAP12Q02952 1782 aa34.97■■■■□ 3.19
CDKN3-202ENST00000335183 CRB1P82279 1406 aa34.97■■■■□ 3.19
CDKN3-202ENST00000335183 PARD3Q8TEW0 1356 aa34.95■■■■□ 3.19
CDKN3-202ENST00000335183 COL18A1P39060 1754 aa34.93■■■■□ 3.18
CDKN3-202ENST00000335183 NUP188Q5SRE5 1749 aa34.93■■■■□ 3.18
CDKN3-202ENST00000335183 AATKQ6ZMQ8 1374 aa34.93■■■■□ 3.18
CDKN3-202ENST00000335183 RGPD5Q99666 1765 aa34.9■■■■□ 3.18
CDKN3-202ENST00000335183 LRRC37A3O60309 1634 aa34.89■■■■□ 3.18
CDKN3-202ENST00000335183 TOM1L2Q6ZVM7 507 aa34.89■■■■□ 3.18
CDKN3-202ENST00000335183 WNK3Q9BYP7 1800 aa34.89■■■■□ 3.18
CDKN3-202ENST00000335183 TTC21BQ7Z4L5 1316 aa34.87■■■■□ 3.17
CDKN3-202ENST00000335183 ZNF692Q9BU19 519 aaPredicted RBP34.87■■■■□ 3.17
CDKN3-202ENST00000335183 SBF2Q86WG5 1849 aa34.85■■■■□ 3.17
CDKN3-202ENST00000335183 SOX12O15370 315 aa34.85■■■■□ 3.17
CDKN3-202ENST00000335183 CPSF1Q10570 1443 aaKnown RBP34.85■■■■□ 3.17
CDKN3-202ENST00000335183 PEAK1Q9H792 1746 aa34.85■■■■□ 3.17
CDKN3-202ENST00000335183 OVOS2A0A0G2JMS6 1433 aa34.84■■■■□ 3.17
CDKN3-202ENST00000335183 OVOS2A0A0J9YW53 1432 aa34.84■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms