RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 CALD1Q05682 793 aaKnown RBP15.09■□□□□ 0.01
HDAC6-201ENST00000334136 BECN1Q14457 450 aa15.09■□□□□ 0.01
HDAC6-201ENST00000334136 REREQ9P2R6 1566 aa15.09■□□□□ 0.01
HDAC6-201ENST00000334136 MADDQ8WXG6 1647 aa15.08■□□□□ 0.01
HDAC6-201ENST00000334136 RRP7AQ9Y3A4 280 aaKnown RBP15.08■□□□□ 0.01
HDAC6-201ENST00000334136 PIK3R4Q99570 1358 aa15.08■□□□□ 0
HDAC6-201ENST00000334136 SLAIN2Q9P270 581 aa15.08■□□□□ 0
HDAC6-201ENST00000334136 LMOD3Q0VAK6 560 aa15.07■□□□□ 0
HDAC6-201ENST00000334136 FER1L4A9Z1Z3 1794 aa15.07■□□□□ 0
HDAC6-201ENST00000334136 C1orf141Q5JVX7 400 aa15.07■□□□□ 0
HDAC6-201ENST00000334136 TTC21BQ7Z4L5 1316 aa15.07■□□□□ 0
HDAC6-201ENST00000334136 ADAMTS2O95450 1211 aa15.06■□□□□ 0
HDAC6-201ENST00000334136 ANKRD36BQ8N2N9 1353 aa15.05■□□□□ 0
HDAC6-201ENST00000334136 ROBO2Q9HCK4 1378 aa15.05■□□□□ 0
HDAC6-201ENST00000334136 APAF1O14727 1248 aa15.05■□□□□ -0
HDAC6-201ENST00000334136 RCAN3Q9UKA8 241 aa15.05■□□□□ -0
HDAC6-201ENST00000334136 TOM1L2Q6ZVM7 507 aa15.04■□□□□ -0
HDAC6-201ENST00000334136 VWDEQ8N2E2 1590 aa15.04■□□□□ -0
HDAC6-201ENST00000334136 TTC21AQ8NDW8 1320 aa15.04■□□□□ -0
HDAC6-201ENST00000334136 BRD4O60885 1362 aaPredicted RBP15.04■□□□□ -0
HDAC6-201ENST00000334136 PREX1Q8TCU6 1659 aa15.04■□□□□ -0
HDAC6-201ENST00000334136 DEPDC5O75140 1603 aa15.04■□□□□ -0
HDAC6-201ENST00000334136 FYB1O15117 783 aa15.03■□□□□ -0
HDAC6-201ENST00000334136 FRAT1Q92837 279 aaPredicted RBP15.03■□□□□ -0
HDAC6-201ENST00000334136 PIK3C2BO00750 1634 aa15.03■□□□□ -0
HDAC6-201ENST00000334136 NAP1L5Q96NT1 182 aaPredicted RBP15.03■□□□□ -0
HDAC6-201ENST00000334136 SPATA31D1Q6ZQQ2 1576 aa15.02■□□□□ -0
HDAC6-201ENST00000334136 SMG6Q86US8 1419 aaKnown RBP15.02□□□□□ -0.01
HDAC6-201ENST00000334136 TEFQ10587 303 aa15.01□□□□□ -0.01
HDAC6-201ENST00000334136 ADAMTS8Q9UP79 889 aa15.01□□□□□ -0.01
HDAC6-201ENST00000334136 SULT6B1Q6IMI4 303 aa15.01□□□□□ -0.01
HDAC6-201ENST00000334136 LRRC59Q96AG4 307 aaKnown RBP15.01□□□□□ -0.01
HDAC6-201ENST00000334136 RUNDC1Q96C34 613 aa15.01□□□□□ -0.01
HDAC6-201ENST00000334136 TRIM44Q96DX7 344 aaPredicted RBP15.01□□□□□ -0.01
HDAC6-201ENST00000334136 MYH16Q9H6N6 1097 aa15.01□□□□□ -0.01
HDAC6-201ENST00000334136 GOLGA2Q08379 1002 aa15.01□□□□□ -0.01
HDAC6-201ENST00000334136 EMILIN1Q9Y6C2 1016 aa15.01□□□□□ -0.01
HDAC6-201ENST00000334136 MROH1Q8NDA8 1641 aa15□□□□□ -0.01
HDAC6-201ENST00000334136 SLC4A3P48751 1232 aa15□□□□□ -0.01
HDAC6-201ENST00000334136 NGLY1Q96IV0 654 aa15□□□□□ -0.01
HDAC6-201ENST00000334136 RIPK4P57078 832 aa15□□□□□ -0.01
HDAC6-201ENST00000334136 SPRYD3Q8NCJ5 442 aa15□□□□□ -0.01
HDAC6-201ENST00000334136 TCERG1O14776 1098 aaKnown RBP14.99□□□□□ -0.01
HDAC6-201ENST00000334136 PHF23Q9BUL5 403 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-201ENST00000334136 SBNO2Q9Y2G9 1366 aa14.99□□□□□ -0.01
HDAC6-201ENST00000334136 CEP170BQ9Y4F5 1589 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-201ENST00000334136 ZRANB1Q9UGI0 708 aa14.99□□□□□ -0.01
HDAC6-201ENST00000334136 NSD2O96028 1365 aa14.99□□□□□ -0.01
HDAC6-201ENST00000334136 SYNMO15061 1565 aa14.99□□□□□ -0.01
HDAC6-201ENST00000334136 PLEKHG3A1L390 1219 aa14.99□□□□□ -0.01
HDAC6-201ENST00000334136 PRKAR2BP31323 418 aa14.99□□□□□ -0.01
HDAC6-201ENST00000334136 CABLES1Q8TDN4 633 aa14.99□□□□□ -0.01
HDAC6-201ENST00000334136 CARD14Q9BXL6 1004 aa14.99□□□□□ -0.01
HDAC6-201ENST00000334136 A0A1W2PP64 1363 aa14.99□□□□□ -0.01
HDAC6-201ENST00000334136 FBLN1P23142 703 aa14.99□□□□□ -0.01
HDAC6-201ENST00000334136 ALKQ9UM73 1620 aa14.98□□□□□ -0.01
HDAC6-201ENST00000334136 FAM135BQ49AJ0 1406 aa14.98□□□□□ -0.01
HDAC6-201ENST00000334136 TATP17735 454 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-201ENST00000334136 DDX17Q92841 729 aaKnown RBP14.98□□□□□ -0.01
HDAC6-201ENST00000334136 CHRNA2Q15822 529 aa14.97□□□□□ -0.01
HDAC6-201ENST00000334136 AMER1Q5JTC6 1135 aaPredicted RBP14.97□□□□□ -0.01
HDAC6-201ENST00000334136 SYTL4Q96C24 671 aaPredicted RBP14.97□□□□□ -0.01
HDAC6-201ENST00000334136 SLKQ9H2G2 1235 aaPredicted RBP14.97□□□□□ -0.01
HDAC6-201ENST00000334136 PLEKHO1Q53GL0 409 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-201ENST00000334136 BCORL1Q5H9F3 1711 aa14.95□□□□□ -0.02
HDAC6-201ENST00000334136 FTSJ3Q8IY81 847 aaKnown RBP14.95□□□□□ -0.02
HDAC6-201ENST00000334136 TCP11L2Q8N4U5 519 aa14.95□□□□□ -0.02
HDAC6-201ENST00000334136 EXOC6Q8TAG9 804 aa14.95□□□□□ -0.02
HDAC6-201ENST00000334136 PLIN1O60240 522 aa14.94□□□□□ -0.02
HDAC6-201ENST00000334136 CHMP4AQ9BY43 222 aa14.94□□□□□ -0.02
HDAC6-201ENST00000334136 ZNF330Q9Y3S2 320 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-201ENST00000334136 GCP02774 474 aa14.94□□□□□ -0.02
HDAC6-201ENST00000334136 NGEFQ8N5V2 710 aa14.94□□□□□ -0.02
HDAC6-201ENST00000334136 GAS2L2Q8NHY3 880 aa14.94□□□□□ -0.02
HDAC6-201ENST00000334136 NEXMIFQ5QGS0 1516 aa14.94□□□□□ -0.02
HDAC6-201ENST00000334136 ZBED9Q6R2W3 1325 aa14.93□□□□□ -0.02
HDAC6-201ENST00000334136 MSH5O43196 834 aa14.93□□□□□ -0.02
HDAC6-201ENST00000334136 PDE4AP27815 886 aa14.93□□□□□ -0.02
HDAC6-201ENST00000334136 PDE3BQ13370 1112 aa14.93□□□□□ -0.02
HDAC6-201ENST00000334136 CCDC184Q52MB2 194 aa14.93□□□□□ -0.02
HDAC6-201ENST00000334136 PNISRQ8TF01 805 aaKnown RBP14.93□□□□□ -0.02
HDAC6-201ENST00000334136 NCLP19338 710 aaKnown RBP14.92□□□□□ -0.02
HDAC6-201ENST00000334136 DDX54Q8TDD1 881 aaKnown RBP14.92□□□□□ -0.02
HDAC6-201ENST00000334136 GZF1Q9H116 711 aaPredicted RBP14.92□□□□□ -0.02
HDAC6-201ENST00000334136 ADAMTS13Q76LX8 1427 aa14.92□□□□□ -0.02
HDAC6-201ENST00000334136 ELL2O00472 640 aaPredicted RBP14.91□□□□□ -0.02
HDAC6-201ENST00000334136 PER1O15534 1290 aaPredicted RBP14.91□□□□□ -0.02
HDAC6-201ENST00000334136 TTC5Q8N0Z6 440 aa14.91□□□□□ -0.02
HDAC6-201ENST00000334136 ASXL1Q8IXJ9 1541 aa14.91□□□□□ -0.02
HDAC6-201ENST00000334136 ZNF530Q6P9A1 599 aaPredicted RBP14.91□□□□□ -0.02
HDAC6-201ENST00000334136 STK31Q9BXU1 1019 aa14.91□□□□□ -0.02
HDAC6-201ENST00000334136 FCHSD2O94868 740 aa14.91□□□□□ -0.02
HDAC6-201ENST00000334136 HSP90AB2PQ58FF8 381 aa14.91□□□□□ -0.02
HDAC6-201ENST00000334136 PRR36Q9H6K5 1346 aa14.9□□□□□ -0.02
HDAC6-201ENST00000334136 EDC4Q6P2E9 1401 aaKnown RBP14.9□□□□□ -0.02
HDAC6-201ENST00000334136 NPHP1O15259 732 aa14.9□□□□□ -0.02
HDAC6-201ENST00000334136 USHBP1Q8N6Y0 703 aa14.9□□□□□ -0.02
HDAC6-201ENST00000334136 SPG7Q9UQ90 795 aa14.9□□□□□ -0.02
HDAC6-201ENST00000334136 TMEM131LA2VDJ0 1609 aa14.89□□□□□ -0.03
HDAC6-201ENST00000334136 MS4A1P11836 297 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms