RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 KIF3AQ9Y496 699 aa13.84□□□□□ -0.19
POLR1B-202ENST00000333990 NFE2L2Q16236 605 aa13.83□□□□□ -0.19
POLR1B-202ENST00000333990 NME9Q86XW9 330 aa13.83□□□□□ -0.19
POLR1B-202ENST00000333990 VPS37DQ86XT2 251 aa13.83□□□□□ -0.2
POLR1B-202ENST00000333990 RILPL2Q969X0 211 aa13.83□□□□□ -0.2
POLR1B-202ENST00000333990 TBX22Q9Y458 520 aa13.83□□□□□ -0.2
POLR1B-202ENST00000333990 DIAPH3Q9NSV4 1193 aa13.83□□□□□ -0.2
POLR1B-202ENST00000333990 NPHP3Q7Z494 1330 aa13.83□□□□□ -0.2
POLR1B-202ENST00000333990 MAPKBP1O60336 1514 aa13.82□□□□□ -0.2
POLR1B-202ENST00000333990 CFAP74Q9C0B2 1584 aa13.82□□□□□ -0.2
POLR1B-202ENST00000333990 TTC21AQ8NDW8 1320 aa13.82□□□□□ -0.2
POLR1B-202ENST00000333990 WWC1Q8IX03 1113 aa13.82□□□□□ -0.2
POLR1B-202ENST00000333990 TOMM22Q9NS69 142 aa13.82□□□□□ -0.2
POLR1B-202ENST00000333990 TTC21BQ7Z4L5 1316 aa13.82□□□□□ -0.2
POLR1B-202ENST00000333990 TRIM44Q96DX7 344 aaPredicted RBP13.82□□□□□ -0.2
POLR1B-202ENST00000333990 ABCA8O94911 1581 aa13.82□□□□□ -0.2
POLR1B-202ENST00000333990 ST18O60284 1047 aa13.81□□□□□ -0.2
POLR1B-202ENST00000333990 RBM33Q96EV2 1170 aaKnown RBP13.81□□□□□ -0.2
POLR1B-202ENST00000333990 RALGAPBQ86X10 1494 aa13.81□□□□□ -0.2
POLR1B-202ENST00000333990 ACEP12821 1306 aa13.81□□□□□ -0.2
POLR1B-202ENST00000333990 GNAT3A8MTJ3 354 aa13.81□□□□□ -0.2
POLR1B-202ENST00000333990 AMOTL1Q8IY63 956 aa13.81□□□□□ -0.2
POLR1B-202ENST00000333990 ERC2O15083 957 aa13.81□□□□□ -0.2
POLR1B-202ENST00000333990 PDE3AQ14432 1141 aa13.8□□□□□ -0.2
POLR1B-202ENST00000333990 TPRNQ4KMQ1 711 aa13.8□□□□□ -0.2
POLR1B-202ENST00000333990 ABCC11Q96J66 1382 aa13.8□□□□□ -0.2
POLR1B-202ENST00000333990 PRAG1Q86YV5 1406 aa13.8□□□□□ -0.2
POLR1B-202ENST00000333990 REC8O95072 547 aa13.8□□□□□ -0.2
POLR1B-202ENST00000333990 C19orf44Q9H6X5 657 aa13.8□□□□□ -0.2
POLR1B-202ENST00000333990 PTMSP20962 102 aa13.79□□□□□ -0.2
POLR1B-202ENST00000333990 TMPOP42166 694 aaKnown RBP13.79□□□□□ -0.2
POLR1B-202ENST00000333990 ANKRD36BQ8N2N9 1353 aa13.79□□□□□ -0.2
POLR1B-202ENST00000333990 UHRF1BP1Q6BDS2 1440 aa13.79□□□□□ -0.2
POLR1B-202ENST00000333990 GBP4Q96PP9 640 aa13.78□□□□□ -0.2
POLR1B-202ENST00000333990 EIF2AK4Q9P2K8 1649 aaKnown RBP13.78□□□□□ -0.2
POLR1B-202ENST00000333990 SLC4A2P04920 1241 aa13.78□□□□□ -0.2
POLR1B-202ENST00000333990 CCT4P50991 539 aaKnown RBP13.78□□□□□ -0.2
POLR1B-202ENST00000333990 FAM161AQ3B820 660 aa13.78□□□□□ -0.2
POLR1B-202ENST00000333990 CDCA7LQ96GN5 454 aa13.78□□□□□ -0.2
POLR1B-202ENST00000333990 CHD1O14646 1710 aa13.78□□□□□ -0.2
POLR1B-202ENST00000333990 ZFYVE16Q7Z3T8 1539 aa13.77□□□□□ -0.2
POLR1B-202ENST00000333990 BTBD11A6QL63 1104 aa13.77□□□□□ -0.2
POLR1B-202ENST00000333990 CCDC34Q96HJ3 373 aa13.77□□□□□ -0.2
POLR1B-202ENST00000333990 NGLY1Q96IV0 654 aa13.77□□□□□ -0.2
POLR1B-202ENST00000333990 PTMAP06454 111 aaKnown RBP13.77□□□□□ -0.21
POLR1B-202ENST00000333990 CLASRPQ8N2M8 674 aaKnown RBP13.77□□□□□ -0.21
POLR1B-202ENST00000333990 ARHGEF12Q9NZN5 1544 aa13.77□□□□□ -0.21
POLR1B-202ENST00000333990 ZKSCAN1P17029 563 aaPredicted RBP13.76□□□□□ -0.21
POLR1B-202ENST00000333990 TSR2Q969E8 191 aaKnown RBP13.76□□□□□ -0.21
POLR1B-202ENST00000333990 NRDCO43847 1150 aa13.76□□□□□ -0.21
POLR1B-202ENST00000333990 PANK1Q8TE04 598 aa13.76□□□□□ -0.21
POLR1B-202ENST00000333990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.76□□□□□ -0.21
POLR1B-202ENST00000333990 MYO5CQ9NQX4 1742 aa13.76□□□□□ -0.21
POLR1B-202ENST00000333990 C11orf95C9JLR9 678 aaPredicted RBP13.76□□□□□ -0.21
POLR1B-202ENST00000333990 EMILIN1Q9Y6C2 1016 aa13.76□□□□□ -0.21
POLR1B-202ENST00000333990 ADAMTS2O95450 1211 aa13.75□□□□□ -0.21
POLR1B-202ENST00000333990 SRCIN1Q9C0H9 1055 aa13.75□□□□□ -0.21
POLR1B-202ENST00000333990 GOLGA6L6A8MZA4 724 aa13.75□□□□□ -0.21
POLR1B-202ENST00000333990 STARD3NLO95772 234 aa13.75□□□□□ -0.21
POLR1B-202ENST00000333990 CPLX2Q6PUV4 134 aaKnown RBP13.75□□□□□ -0.21
POLR1B-202ENST00000333990 ARHGEF5Q12774 1597 aa13.75□□□□□ -0.21
POLR1B-202ENST00000333990 MAST1Q9Y2H9 1570 aa13.74□□□□□ -0.21
POLR1B-202ENST00000333990 MAGI2Q86UL8 1455 aa13.74□□□□□ -0.21
POLR1B-202ENST00000333990 RNF20Q5VTR2 975 aa13.74□□□□□ -0.21
POLR1B-202ENST00000333990 RBM19Q9Y4C8 960 aaKnown RBP13.74□□□□□ -0.21
POLR1B-202ENST00000333990 UBAP1LF5GYI3 381 aa13.74□□□□□ -0.21
POLR1B-202ENST00000333990 GNAI2P04899 355 aa13.74□□□□□ -0.21
POLR1B-202ENST00000333990 ERC1Q8IUD2 1116 aa13.74□□□□□ -0.21
POLR1B-202ENST00000333990 NEUROD6Q96NK8 337 aa13.74□□□□□ -0.21
POLR1B-202ENST00000333990 DISP3Q9P2K9 1392 aa13.73□□□□□ -0.21
POLR1B-202ENST00000333990 HSPA2P54652 639 aa13.73□□□□□ -0.21
POLR1B-202ENST00000333990 SYNE3Q6ZMZ3 975 aa13.73□□□□□ -0.21
POLR1B-202ENST00000333990 TMOD3Q9NYL9 352 aa13.73□□□□□ -0.21
POLR1B-202ENST00000333990 SPRYD3Q8NCJ5 442 aa13.73□□□□□ -0.21
POLR1B-202ENST00000333990 EXOC5O00471 708 aa13.73□□□□□ -0.21
POLR1B-202ENST00000333990 SURF6O75683 361 aaKnown RBP13.73□□□□□ -0.21
POLR1B-202ENST00000333990 TRIM34Q9BYJ4 488 aa13.73□□□□□ -0.21
POLR1B-202ENST00000333990 TAF7Q15545 349 aaPredicted RBP13.72□□□□□ -0.21
POLR1B-202ENST00000333990 ATF7IPQ6VMQ6 1270 aa13.72□□□□□ -0.21
POLR1B-202ENST00000333990 CSPP1Q1MSJ5 1256 aa13.72□□□□□ -0.21
POLR1B-202ENST00000333990 PZPP20742 1482 aa13.72□□□□□ -0.21
POLR1B-202ENST00000333990 PPIP5K1Q6PFW1 1433 aa13.72□□□□□ -0.21
POLR1B-202ENST00000333990 TRDNQ13061 729 aa13.71□□□□□ -0.21
POLR1B-202ENST00000333990 LNPKQ9C0E8 428 aa13.71□□□□□ -0.21
POLR1B-202ENST00000333990 IFT57Q9NWB7 429 aa13.71□□□□□ -0.21
POLR1B-202ENST00000333990 TRPM2O94759 1503 aa13.71□□□□□ -0.21
POLR1B-202ENST00000333990 KCNA6P17658 529 aa13.71□□□□□ -0.21
POLR1B-202ENST00000333990 TULP1O00294 542 aaPredicted RBP13.71□□□□□ -0.22
POLR1B-202ENST00000333990 APPP05067 770 aa13.71□□□□□ -0.22
POLR1B-202ENST00000333990 INTS3Q68E01 1043 aaKnown RBP13.71□□□□□ -0.22
POLR1B-202ENST00000333990 NCKAP5LQ9HCH0 1330 aa13.7□□□□□ -0.22
POLR1B-202ENST00000333990 KLHL34Q8N239 644 aa13.7□□□□□ -0.22
POLR1B-202ENST00000333990 NOB1Q9ULX3 412 aaKnown RBP13.7□□□□□ -0.22
POLR1B-202ENST00000333990 DCAF8L1A6NGE4 600 aa13.7□□□□□ -0.22
POLR1B-202ENST00000333990 PLCB2Q00722 1185 aa13.7□□□□□ -0.22
POLR1B-202ENST00000333990 GCC1Q96CN9 775 aa13.7□□□□□ -0.22
POLR1B-202ENST00000333990 YTHDC2Q9H6S0 1430 aaKnown RBP13.7□□□□□ -0.22
POLR1B-202ENST00000333990 AKAP17AQ02040 695 aaKnown RBP13.7□□□□□ -0.22
POLR1B-202ENST00000333990 IFNL2Q8IZJ0 200 aa13.7□□□□□ -0.22
POLR1B-202ENST00000333990 FAM177BA6PVY3 158 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms