RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 ZSWIM6Q9HCJ5 1215 aa11.88□□□□□ -0.51
LSAMP-201ENST00000333617 EIF3AQ14152 1382 aaKnown RBP11.88□□□□□ -0.51
LSAMP-201ENST00000333617 SETBP1Q9Y6X0 1596 aa11.87□□□□□ -0.51
LSAMP-201ENST00000333617 MYO3AQ8NEV4 1616 aa11.87□□□□□ -0.51
LSAMP-201ENST00000333617 CNGB1Q14028 1251 aaPredicted RBP11.87□□□□□ -0.51
LSAMP-201ENST00000333617 FAM9BQ8IZU0 186 aa11.87□□□□□ -0.51
LSAMP-201ENST00000333617 MYOM1P52179 1685 aa11.86□□□□□ -0.51
LSAMP-201ENST00000333617 RNF166Q96A37 237 aaPredicted RBP11.86□□□□□ -0.51
LSAMP-201ENST00000333617 ADGRF5Q8IZF2 1346 aa11.86□□□□□ -0.51
LSAMP-201ENST00000333617 CLTCQ00610 1675 aaKnown RBP11.86□□□□□ -0.51
LSAMP-201ENST00000333617 FAM205CA6NFA0 338 aa11.85□□□□□ -0.51
LSAMP-201ENST00000333617 RALBP1Q15311 655 aa11.85□□□□□ -0.51
LSAMP-201ENST00000333617 AGLP35573 1532 aa11.84□□□□□ -0.51
LSAMP-201ENST00000333617 C2orf72A6NCS6 295 aa11.84□□□□□ -0.51
LSAMP-201ENST00000333617 KIF3CO14782 793 aa11.84□□□□□ -0.51
LSAMP-201ENST00000333617 RYDENQ9NUL5 291 aaKnown RBP11.84□□□□□ -0.51
LSAMP-201ENST00000333617 RPGRIP1LQ68CZ1 1315 aa11.84□□□□□ -0.51
LSAMP-201ENST00000333617 QRICH2Q9H0J4 1663 aa11.84□□□□□ -0.51
LSAMP-201ENST00000333617 CDCA8Q53HL2 280 aa11.84□□□□□ -0.51
LSAMP-201ENST00000333617 CFAP70Q5T0N1 1121 aa11.84□□□□□ -0.51
LSAMP-201ENST00000333617 TMC2Q8TDI7 906 aa11.84□□□□□ -0.51
LSAMP-201ENST00000333617 HS3ST6Q96QI5 342 aa11.84□□□□□ -0.51
LSAMP-201ENST00000333617 NEXMIFQ5QGS0 1516 aa11.83□□□□□ -0.52
LSAMP-201ENST00000333617 MYBBP1AQ9BQG0 1328 aaKnown RBP11.82□□□□□ -0.52
LSAMP-201ENST00000333617 PIK3C2GO75747 1445 aa11.82□□□□□ -0.52
LSAMP-201ENST00000333617 TMEM131LA2VDJ0 1609 aa11.82□□□□□ -0.52
LSAMP-201ENST00000333617 SLC24A1O60721 1099 aa11.82□□□□□ -0.52
LSAMP-201ENST00000333617 NKX1-1Q15270 411 aaPredicted RBP11.82□□□□□ -0.52
LSAMP-201ENST00000333617 SUPT16HQ9Y5B9 1047 aaKnown RBP11.82□□□□□ -0.52
LSAMP-201ENST00000333617 ARHGEF40Q8TER5 1519 aa11.82□□□□□ -0.52
LSAMP-201ENST00000333617 PER1O15534 1290 aaPredicted RBP11.81□□□□□ -0.52
LSAMP-201ENST00000333617 BRD4O60885 1362 aaPredicted RBP11.81□□□□□ -0.52
LSAMP-201ENST00000333617 PARD3Q8TEW0 1356 aa11.81□□□□□ -0.52
LSAMP-201ENST00000333617 TMC1Q8TDI8 760 aa11.8□□□□□ -0.52
LSAMP-201ENST00000333617 PANK3Q9H999 370 aa11.8□□□□□ -0.52
LSAMP-201ENST00000333617 ZBED9Q6R2W3 1325 aa11.8□□□□□ -0.52
LSAMP-201ENST00000333617 ARHGEF28Q8N1W1 1705 aaKnown RBP11.8□□□□□ -0.52
LSAMP-201ENST00000333617 ADGRB1O14514 1584 aa11.8□□□□□ -0.52
LSAMP-201ENST00000333617 SLC52A1Q9NWF4 448 aa11.79□□□□□ -0.52
LSAMP-201ENST00000333617 POTEB3A0JP26 581 aa11.79□□□□□ -0.52
LSAMP-201ENST00000333617 GPR153Q6NV75 609 aa11.79□□□□□ -0.52
LSAMP-201ENST00000333617 POTEBQ6S5H4 581 aa11.79□□□□□ -0.52
LSAMP-201ENST00000333617 C14orf93Q9H972 538 aaKnown RBP11.79□□□□□ -0.52
LSAMP-201ENST00000333617 ERBB3P21860 1342 aa11.79□□□□□ -0.52
LSAMP-201ENST00000333617 NEFLP07196 543 aa11.78□□□□□ -0.52
LSAMP-201ENST00000333617 IDI1Q13907 227 aa11.78□□□□□ -0.52
LSAMP-201ENST00000333617 PNISRQ8TF01 805 aaKnown RBP11.78□□□□□ -0.52
LSAMP-201ENST00000333617 ERVK-7P63135 1459 aa11.78□□□□□ -0.52
LSAMP-201ENST00000333617 SBNO2Q9Y2G9 1366 aa11.77□□□□□ -0.53
LSAMP-201ENST00000333617 NLRP13Q86W25 1043 aa11.76□□□□□ -0.53
LSAMP-201ENST00000333617 ZFYVE9O95405 1425 aa11.76□□□□□ -0.53
LSAMP-201ENST00000333617 ARSIQ5FYB1 569 aa11.75□□□□□ -0.53
LSAMP-201ENST00000333617 ASXL1Q8IXJ9 1541 aa11.75□□□□□ -0.53
LSAMP-201ENST00000333617 LRPPRCP42704 1394 aaKnown RBP11.75□□□□□ -0.53
LSAMP-201ENST00000333617 CENPJQ9HC77 1338 aaPredicted RBP11.75□□□□□ -0.53
LSAMP-201ENST00000333617 CC2D1BQ5T0F9 858 aaKnown RBP11.75□□□□□ -0.53
LSAMP-201ENST00000333617 SPATA31D1Q6ZQQ2 1576 aa11.74□□□□□ -0.53
LSAMP-201ENST00000333617 KNSTRNQ9Y448 316 aa11.74□□□□□ -0.53
LSAMP-201ENST00000333617 FBXO31Q5XUX0 539 aaPredicted RBP11.73□□□□□ -0.53
LSAMP-201ENST00000333617 TRAK1Q9UPV9 953 aa11.73□□□□□ -0.53
LSAMP-201ENST00000333617 SLC34A2O95436 690 aa11.72□□□□□ -0.53
LSAMP-201ENST00000333617 NUTM2DQ5VT03 806 aaPredicted RBP11.72□□□□□ -0.53
LSAMP-201ENST00000333617 VARS2Q5ST30 1063 aaKnown RBP11.71□□□□□ -0.53
LSAMP-201ENST00000333617 TMEM132EQ6IEE7 984 aa11.71□□□□□ -0.53
LSAMP-201ENST00000333617 MLECQ14165 292 aa11.71□□□□□ -0.54
LSAMP-201ENST00000333617 GPHNQ9NQX3 736 aaPredicted RBP11.71□□□□□ -0.54
LSAMP-201ENST00000333617 NPC1L1Q9UHC9 1359 aa11.7□□□□□ -0.54
LSAMP-201ENST00000333617 AMER1Q5JTC6 1135 aaPredicted RBP11.7□□□□□ -0.54
LSAMP-201ENST00000333617 SETD1AO15047 1707 aaKnown RBP11.69□□□□□ -0.54
LSAMP-201ENST00000333617 SMG6Q86US8 1419 aaKnown RBP11.68□□□□□ -0.54
LSAMP-201ENST00000333617 GTPBP6O43824 516 aaPredicted RBP11.68□□□□□ -0.54
LSAMP-201ENST00000333617 KHSRPQ92945 711 aaKnown RBP eCLIP11.68□□□□□ -0.54
LSAMP-201ENST00000333617 ALKQ9UM73 1620 aa11.68□□□□□ -0.54
LSAMP-201ENST00000333617 USP32Q8NFA0 1604 aa11.67□□□□□ -0.54
LSAMP-201ENST00000333617 FOXK1P85037 733 aa11.67□□□□□ -0.54
LSAMP-201ENST00000333617 ESF1Q9H501 851 aaKnown RBP11.67□□□□□ -0.54
LSAMP-201ENST00000333617 PCDHGA4Q9Y5G9 962 aa11.67□□□□□ -0.54
LSAMP-201ENST00000333617 INSRP06213 1382 aa11.67□□□□□ -0.54
LSAMP-201ENST00000333617 A2ML1A8K2U0 1454 aa11.67□□□□□ -0.54
LSAMP-201ENST00000333617 BCANQ96GW7 911 aa11.67□□□□□ -0.54
LSAMP-201ENST00000333617 TULP4Q9NRJ4 1543 aa11.66□□□□□ -0.54
LSAMP-201ENST00000333617 PPP2R1AP30153 589 aa11.66□□□□□ -0.54
LSAMP-201ENST00000333617 PLPP6Q8IY26 295 aa11.66□□□□□ -0.54
LSAMP-201ENST00000333617 BLMP54132 1417 aaPredicted RBP11.65□□□□□ -0.54
LSAMP-201ENST00000333617 EVC2Q86UK5 1308 aa11.65□□□□□ -0.54
LSAMP-201ENST00000333617 ZMYM3Q14202 1370 aa11.65□□□□□ -0.54
LSAMP-201ENST00000333617 UBR1Q8IWV7 1749 aa11.65□□□□□ -0.54
LSAMP-201ENST00000333617 PUS7Q96PZ0 661 aaKnown RBP11.65□□□□□ -0.54
LSAMP-201ENST00000333617 NUDCQ9Y266 331 aa11.65□□□□□ -0.54
LSAMP-201ENST00000333617 PTPRMP28827 1452 aa11.64□□□□□ -0.55
LSAMP-201ENST00000333617 FER1L4A9Z1Z3 1794 aa11.64□□□□□ -0.55
LSAMP-201ENST00000333617 YTHDC2Q9H6S0 1430 aaKnown RBP11.64□□□□□ -0.55
LSAMP-201ENST00000333617 RIMS2Q9UQ26 1411 aa11.64□□□□□ -0.55
LSAMP-201ENST00000333617 DSG2Q14126 1118 aa11.63□□□□□ -0.55
LSAMP-201ENST00000333617 ZNF687Q8N1G0 1237 aa11.63□□□□□ -0.55
LSAMP-201ENST00000333617 CARD14Q9BXL6 1004 aa11.63□□□□□ -0.55
LSAMP-201ENST00000333617 NRXN3Q9Y4C0 1643 aa11.63□□□□□ -0.55
LSAMP-201ENST00000333617 ANKRD26Q9UPS8 1709 aa11.63□□□□□ -0.55
LSAMP-201ENST00000333617 NUDT7P0C024 238 aa11.62□□□□□ -0.55
LSAMP-201ENST00000333617 STK26Q9P289 416 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms