RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 SSH2Q76I76 1423 aa31.41■■■□□ 2.62
TSEN54-201ENST00000333213 ANKRD26Q9UPS8 1709 aa31.4■■■□□ 2.62
TSEN54-201ENST00000333213 NME9Q86XW9 330 aa31.39■■■□□ 2.62
TSEN54-201ENST00000333213 NGDNQ8NEJ9 315 aaKnown RBP31.39■■■□□ 2.62
TSEN54-201ENST00000333213 ZRANB1Q9UGI0 708 aa31.37■■■□□ 2.61
TSEN54-201ENST00000333213 TTC21BQ7Z4L5 1316 aa31.37■■■□□ 2.61
TSEN54-201ENST00000333213 PHF8Q9UPP1 1060 aa31.37■■■□□ 2.61
TSEN54-201ENST00000333213 ORAI2Q96SN7 254 aa31.36■■■□□ 2.61
TSEN54-201ENST00000333213 ESCO1Q5FWF5 840 aa31.36■■■□□ 2.61
TSEN54-201ENST00000333213 DCCP43146 1447 aa31.35■■■□□ 2.61
TSEN54-201ENST00000333213 C1orf167Q5SNV9 1468 aa31.34■■■□□ 2.61
TSEN54-201ENST00000333213 MST1RQ04912 1400 aa31.33■■■□□ 2.61
TSEN54-201ENST00000333213 ATF3P18847 181 aa31.32■■■□□ 2.6
TSEN54-201ENST00000333213 MSH6P52701 1360 aa31.3■■■□□ 2.6
TSEN54-201ENST00000333213 FBLN1P23142 703 aa31.28■■■□□ 2.6
TSEN54-201ENST00000333213 MTHFSP49914 203 aa31.28■■■□□ 2.6
TSEN54-201ENST00000333213 CADPS2Q86UW7 1296 aa31.27■■■□□ 2.6
TSEN54-201ENST00000333213 TTC21AQ8NDW8 1320 aa31.25■■■□□ 2.59
TSEN54-201ENST00000333213 OVOS2A0A0J9YW53 1432 aa31.24■■■□□ 2.59
TSEN54-201ENST00000333213 OVOS2Q6IE36 1432 aa31.24■■■□□ 2.59
TSEN54-201ENST00000333213 COG3Q96JB2 828 aa31.24■■■□□ 2.59
TSEN54-201ENST00000333213 FOXO3O43524 673 aa31.23■■■□□ 2.59
TSEN54-201ENST00000333213 PIK3C2AO00443 1686 aa31.22■■■□□ 2.59
TSEN54-201ENST00000333213 HNRNPUQ00839 825 aaKnown RBP eCLIP31.2■■■□□ 2.59
TSEN54-201ENST00000333213 PSME1Q06323 249 aa31.19■■■□□ 2.58
TSEN54-201ENST00000333213 POLKQ9UBT6 870 aa31.18■■■□□ 2.58
TSEN54-201ENST00000333213 KIF1AQ12756 1690 aa31.17■■■□□ 2.58
TSEN54-201ENST00000333213 ADAMTS8Q9UP79 889 aa31.17■■■□□ 2.58
TSEN54-201ENST00000333213 USP31Q70CQ4 1352 aa31.17■■■□□ 2.58
TSEN54-201ENST00000333213 LTBP4Q8N2S1 1624 aa31.17■■■□□ 2.58
TSEN54-201ENST00000333213 XPCQ01831 940 aaPredicted RBP31.16■■■□□ 2.58
TSEN54-201ENST00000333213 AATKQ6ZMQ8 1374 aa31.16■■■□□ 2.58
TSEN54-201ENST00000333213 PAK3O75914 559 aaPredicted RBP31.15■■■□□ 2.58
TSEN54-201ENST00000333213 SHPRHQ149N8 1683 aa31.14■■■□□ 2.58
TSEN54-201ENST00000333213 MAP2P11137 1827 aaKnown RBP31.14■■■□□ 2.58
TSEN54-201ENST00000333213 MARF1Q9Y4F3 1742 aaKnown RBP31.14■■■□□ 2.57
TSEN54-201ENST00000333213 NUTM2GQ5VZR2 741 aa31.12■■■□□ 2.57
TSEN54-201ENST00000333213 ABTB2Q8N961 1025 aa31.12■■■□□ 2.57
TSEN54-201ENST00000333213 DDX17Q92841 729 aaKnown RBP31.12■■■□□ 2.57
TSEN54-201ENST00000333213 COL3A1P02461 1466 aaPredicted RBP31.12■■■□□ 2.57
TSEN54-201ENST00000333213 EMILIN1Q9Y6C2 1016 aa31.12■■■□□ 2.57
TSEN54-201ENST00000333213 PNPLA6Q8IY17 1366 aa31.11■■■□□ 2.57
TSEN54-201ENST00000333213 NLRP6P59044 892 aa31.11■■■□□ 2.57
TSEN54-201ENST00000333213 RRS1Q15050 365 aaKnown RBP31.11■■■□□ 2.57
TSEN54-201ENST00000333213 SENP3-EIF4A1A0A087X0R7 540 aa31.1■■■□□ 2.57
TSEN54-201ENST00000333213 WDR43Q15061 677 aaKnown RBP eCLIP31.1■■■□□ 2.57
TSEN54-201ENST00000333213 SLAIN2Q9P270 581 aa31.1■■■□□ 2.57
TSEN54-201ENST00000333213 KRT28Q7Z3Y7 464 aa31.1■■■□□ 2.57
TSEN54-201ENST00000333213 TRPM3Q9HCF6 1732 aaPredicted RBP31.1■■■□□ 2.57
TSEN54-201ENST00000333213 SMG6Q86US8 1419 aaKnown RBP31.09■■■□□ 2.57
TSEN54-201ENST00000333213 USP54Q70EL1 1684 aa31.09■■■□□ 2.57
TSEN54-201ENST00000333213 BRINP3Q76B58 766 aa31.09■■■□□ 2.57
TSEN54-201ENST00000333213 CFAP53Q96M91 514 aa31.08■■■□□ 2.57
TSEN54-201ENST00000333213 BLMP54132 1417 aaPredicted RBP31.08■■■□□ 2.57
TSEN54-201ENST00000333213 INSRP06213 1382 aa31.08■■■□□ 2.57
TSEN54-201ENST00000333213 PPM1GO15355 546 aaPredicted RBP31.06■■■□□ 2.56
TSEN54-201ENST00000333213 SOX12O15370 315 aa31.05■■■□□ 2.56
TSEN54-201ENST00000333213 AEBP2Q6ZN18 517 aaPredicted RBP31.05■■■□□ 2.56
TSEN54-201ENST00000333213 CDK12Q9NYV4 1490 aaPredicted RBP31.01■■■□□ 2.56
TSEN54-201ENST00000333213 NPHP3Q7Z494 1330 aa31.01■■■□□ 2.56
TSEN54-201ENST00000333213 ZBED9Q6R2W3 1325 aa31.01■■■□□ 2.55
TSEN54-201ENST00000333213 PXDNQ92626 1479 aa31■■■□□ 2.55
TSEN54-201ENST00000333213 PEAK1Q9H792 1746 aa30.99■■■□□ 2.55
TSEN54-201ENST00000333213 MAP3K19Q56UN5 1328 aa30.98■■■□□ 2.55
TSEN54-201ENST00000333213 ALS2Q96Q42 1657 aa30.98■■■□□ 2.55
TSEN54-201ENST00000333213 DIAPH1O60610 1272 aaKnown RBP30.98■■■□□ 2.55
TSEN54-201ENST00000333213 CCDC146Q8IYE0 955 aa30.97■■■□□ 2.55
TSEN54-201ENST00000333213 SBNO1A3KN83 1393 aa30.95■■■□□ 2.54
TSEN54-201ENST00000333213 LMOD2Q6P5Q4 547 aa30.94■■■□□ 2.54
TSEN54-201ENST00000333213 MYT1Q01538 1121 aa30.93■■■□□ 2.54
TSEN54-201ENST00000333213 NFAT5O94916 1531 aa30.93■■■□□ 2.54
TSEN54-201ENST00000333213 U2AF1L5P0DN76 240 aaPredicted RBP30.92■■■□□ 2.54
TSEN54-201ENST00000333213 IL13P35225 146 aa30.92■■■□□ 2.54
TSEN54-201ENST00000333213 U2AF1Q01081 240 aaKnown RBP eCLIP30.92■■■□□ 2.54
TSEN54-201ENST00000333213 U2SURPO15042 1029 aaKnown RBP30.91■■■□□ 2.54
TSEN54-201ENST00000333213 HSP90AB2PQ58FF8 381 aa30.91■■■□□ 2.54
TSEN54-201ENST00000333213 NUDCQ9Y266 331 aa30.91■■■□□ 2.54
TSEN54-201ENST00000333213 SLIT3O75094 1523 aa30.91■■■□□ 2.54
TSEN54-201ENST00000333213 USP19O94966 1318 aa30.9■■■□□ 2.54
TSEN54-201ENST00000333213 SALL2Q9Y467 1007 aaPredicted RBP30.9■■■□□ 2.54
TSEN54-201ENST00000333213 SOS2Q07890 1332 aaPredicted RBP30.9■■■□□ 2.54
TSEN54-201ENST00000333213 TNS3Q68CZ2 1445 aa30.89■■■□□ 2.54
TSEN54-201ENST00000333213 SPATA31A3Q5VYP0 1347 aa30.89■■■□□ 2.54
TSEN54-201ENST00000333213 PLEKHG5O94827 1062 aa30.88■■■□□ 2.53
TSEN54-201ENST00000333213 MED1Q15648 1581 aaPredicted RBP30.87■■■□□ 2.53
TSEN54-201ENST00000333213 GCP02774 474 aa30.87■■■□□ 2.53
TSEN54-201ENST00000333213 FLT4P35916 1363 aa30.86■■■□□ 2.53
TSEN54-201ENST00000333213 APAF1O14727 1248 aa30.86■■■□□ 2.53
TSEN54-201ENST00000333213 EIF4A2Q14240 407 aaKnown RBP30.86■■■□□ 2.53
TSEN54-201ENST00000333213 KCNH5Q8NCM2 988 aa30.86■■■□□ 2.53
TSEN54-201ENST00000333213 NHSL1Q5SYE7 1610 aa30.85■■■□□ 2.53
TSEN54-201ENST00000333213 AMPHP49418 695 aa30.84■■■□□ 2.53
TSEN54-201ENST00000333213 LTN1O94822 1766 aa30.83■■■□□ 2.53
TSEN54-201ENST00000333213 PLEKHF1Q96S99 279 aa30.83■■■□□ 2.53
TSEN54-201ENST00000333213 HOXC9P31274 260 aa30.83■■■□□ 2.53
TSEN54-201ENST00000333213 RUNDC1Q96C34 613 aa30.83■■■□□ 2.53
TSEN54-201ENST00000333213 KIF24Q5T7B8 1368 aa30.82■■■□□ 2.52
TSEN54-201ENST00000333213 ROBO1Q9Y6N7 1651 aa30.81■■■□□ 2.52
TSEN54-201ENST00000333213 IQSEC2Q5JU85 1478 aa30.8■■■□□ 2.52
TSEN54-201ENST00000333213 ARHGEF25Q86VW2 580 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms