RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 RNF17Q9BXT8 1623 aaKnown RBP14.77□□□□□ -0.05
EFCAB13-201ENST00000331493 FOXD4L5Q5VV16 416 aaPredicted RBP14.77□□□□□ -0.05
EFCAB13-201ENST00000331493 FOXD4L4Q8WXT5 416 aaPredicted RBP14.77□□□□□ -0.05
EFCAB13-201ENST00000331493 NECTIN2Q92692 538 aa14.77□□□□□ -0.05
EFCAB13-201ENST00000331493 RBM42Q9BTD8 480 aaKnown RBP14.77□□□□□ -0.05
EFCAB13-201ENST00000331493 CHMP5Q9NZZ3 219 aa14.77□□□□□ -0.05
EFCAB13-201ENST00000331493 MAP3K4Q9Y6R4 1608 aa14.76□□□□□ -0.05
EFCAB13-201ENST00000331493 MCM4P33991 863 aa14.76□□□□□ -0.05
EFCAB13-201ENST00000331493 CHD1LQ86WJ1 897 aa14.76□□□□□ -0.05
EFCAB13-201ENST00000331493 ZBTB7CA1YPR0 619 aa14.76□□□□□ -0.05
EFCAB13-201ENST00000331493 TRAK2O60296 914 aa14.76□□□□□ -0.05
EFCAB13-201ENST00000331493 PANK2Q9BZ23 570 aa14.76□□□□□ -0.05
EFCAB13-201ENST00000331493 CCDC27Q2M243 656 aa14.76□□□□□ -0.05
EFCAB13-201ENST00000331493 TET3O43151 1660 aa14.76□□□□□ -0.05
EFCAB13-201ENST00000331493 MIS18AQ9NYP9 233 aa14.75□□□□□ -0.05
EFCAB13-201ENST00000331493 KIF1BO60333 1816 aa14.75□□□□□ -0.05
EFCAB13-201ENST00000331493 KRT24Q2M2I5 525 aa14.75□□□□□ -0.05
EFCAB13-201ENST00000331493 TWISTNBQ3B726 338 aaPredicted RBP14.75□□□□□ -0.05
EFCAB13-201ENST00000331493 L1TD1Q5T7N2 865 aaKnown RBP14.75□□□□□ -0.05
EFCAB13-201ENST00000331493 NAP1L5Q96NT1 182 aaPredicted RBP14.75□□□□□ -0.05
EFCAB13-201ENST00000331493 ATAD2Q6PL18 1390 aa14.75□□□□□ -0.05
EFCAB13-201ENST00000331493 ZNF518AQ6AHZ1 1483 aa14.74□□□□□ -0.05
EFCAB13-201ENST00000331493 C14orf37Q86TY3 774 aa14.74□□□□□ -0.05
EFCAB13-201ENST00000331493 NOL8Q76FK4 1167 aaKnown RBP14.74□□□□□ -0.05
EFCAB13-201ENST00000331493 FAM69CQ0P6D2 419 aa14.74□□□□□ -0.05
EFCAB13-201ENST00000331493 COG3Q96JB2 828 aa14.74□□□□□ -0.05
EFCAB13-201ENST00000331493 SLC52A1Q9NWF4 448 aa14.74□□□□□ -0.05
EFCAB13-201ENST00000331493 POLKQ9UBT6 870 aa14.73□□□□□ -0.05
EFCAB13-201ENST00000331493 CEP152O94986 1710 aa14.73□□□□□ -0.05
EFCAB13-201ENST00000331493 AAMPQ13685 434 aa14.73□□□□□ -0.05
EFCAB13-201ENST00000331493 ZBTB40Q9NUA8 1239 aa14.73□□□□□ -0.05
EFCAB13-201ENST00000331493 PLEKHF1Q96S99 279 aa14.73□□□□□ -0.05
EFCAB13-201ENST00000331493 FCHSD2O94868 740 aa14.72□□□□□ -0.05
EFCAB13-201ENST00000331493 MYOM1P52179 1685 aa14.72□□□□□ -0.05
EFCAB13-201ENST00000331493 SULT6B1Q6IMI4 303 aa14.71□□□□□ -0.05
EFCAB13-201ENST00000331493 C8orf58Q8NAV2 365 aa14.71□□□□□ -0.05
EFCAB13-201ENST00000331493 PHF23Q9BUL5 403 aaPredicted RBP14.71□□□□□ -0.05
EFCAB13-201ENST00000331493 MCM10Q7L590 875 aa14.71□□□□□ -0.05
EFCAB13-201ENST00000331493 MBIPQ9NS73 344 aa14.71□□□□□ -0.05
EFCAB13-201ENST00000331493 MYOM2P54296 1465 aa14.71□□□□□ -0.05
EFCAB13-201ENST00000331493 SMARCA5O60264 1052 aaPredicted RBP14.71□□□□□ -0.06
EFCAB13-201ENST00000331493 SBNO2Q9Y2G9 1366 aa14.71□□□□□ -0.06
EFCAB13-201ENST00000331493 UHRF1BP1LA0JNW5 1464 aa14.7□□□□□ -0.06
EFCAB13-201ENST00000331493 GNAI1P63096 354 aa14.7□□□□□ -0.06
EFCAB13-201ENST00000331493 NFE2L2Q16236 605 aa14.7□□□□□ -0.06
EFCAB13-201ENST00000331493 FOXD4L6Q3SYB3 417 aaPredicted RBP14.7□□□□□ -0.06
EFCAB13-201ENST00000331493 FOXD4L3Q6VB84 417 aaPredicted RBP14.7□□□□□ -0.06
EFCAB13-201ENST00000331493 C16orf71Q8IYS4 520 aaPredicted RBP14.7□□□□□ -0.06
EFCAB13-201ENST00000331493 TRIM44Q96DX7 344 aaPredicted RBP14.7□□□□□ -0.06
EFCAB13-201ENST00000331493 SHROOM2Q13796 1616 aa14.7□□□□□ -0.06
EFCAB13-201ENST00000331493 HDAC1Q13547 482 aaPredicted RBP14.7□□□□□ -0.06
EFCAB13-201ENST00000331493 LTV1Q96GA3 475 aaPredicted RBP14.7□□□□□ -0.06
EFCAB13-201ENST00000331493 EFCAB6Q5THR3 1501 aa14.69□□□□□ -0.06
EFCAB13-201ENST00000331493 AEBP1Q8IUX7 1158 aa14.69□□□□□ -0.06
EFCAB13-201ENST00000331493 NUTM2GQ5VZR2 741 aa14.69□□□□□ -0.06
EFCAB13-201ENST00000331493 CT47B1P0C2W7 299 aaPredicted RBP14.69□□□□□ -0.06
EFCAB13-201ENST00000331493 SMC5Q8IY18 1101 aa14.69□□□□□ -0.06
EFCAB13-201ENST00000331493 ANTXR1Q9H6X2 564 aa14.69□□□□□ -0.06
EFCAB13-201ENST00000331493 VAMP4O75379 141 aa14.68□□□□□ -0.06
EFCAB13-201ENST00000331493 XRCC6P12956 609 aaKnown RBP eCLIP14.68□□□□□ -0.06
EFCAB13-201ENST00000331493 NUCB1Q02818 461 aa14.68□□□□□ -0.06
EFCAB13-201ENST00000331493 CALD1Q05682 793 aaKnown RBP14.68□□□□□ -0.06
EFCAB13-201ENST00000331493 PPRC1Q5VV67 1664 aaKnown RBP14.68□□□□□ -0.06
EFCAB13-201ENST00000331493 TBC1D9Q6ZT07 1266 aa14.67□□□□□ -0.06
EFCAB13-201ENST00000331493 RSPH6AQ9H0K4 717 aa14.67□□□□□ -0.06
EFCAB13-201ENST00000331493 MROH2AA6NES4 1674 aa14.67□□□□□ -0.06
EFCAB13-201ENST00000331493 GBP4Q96PP9 640 aa14.66□□□□□ -0.06
EFCAB13-201ENST00000331493 CLASP1Q7Z460 1538 aa14.66□□□□□ -0.06
EFCAB13-201ENST00000331493 NUDT16Q96DE0 195 aaKnown RBP14.66□□□□□ -0.06
EFCAB13-201ENST00000331493 TNPO1Q92973 898 aaKnown RBP14.66□□□□□ -0.06
EFCAB13-201ENST00000331493 GOLGA6L22H0YM25 854 aa14.65□□□□□ -0.06
EFCAB13-201ENST00000331493 NSD2O96028 1365 aa14.65□□□□□ -0.06
EFCAB13-201ENST00000331493 ABCC11Q96J66 1382 aa14.65□□□□□ -0.06
EFCAB13-201ENST00000331493 TSHZ3Q63HK5 1081 aa14.65□□□□□ -0.06
EFCAB13-201ENST00000331493 F6X3S4 739 aa14.64□□□□□ -0.07
EFCAB13-201ENST00000331493 ZBTB7BO15156 539 aaPredicted RBP14.64□□□□□ -0.07
EFCAB13-201ENST00000331493 OTUD7AQ8TE49 926 aaPredicted RBP14.64□□□□□ -0.07
EFCAB13-201ENST00000331493 CHMP4BQ9H444 224 aaKnown RBP14.64□□□□□ -0.07
EFCAB13-201ENST00000331493 DDX49Q9Y6V7 483 aaKnown RBP14.64□□□□□ -0.07
EFCAB13-201ENST00000331493 YEATS2Q9ULM3 1422 aa14.64□□□□□ -0.07
EFCAB13-201ENST00000331493 QRICH2Q9H0J4 1663 aa14.64□□□□□ -0.07
EFCAB13-201ENST00000331493 CD2BP2O95400 341 aaKnown RBP14.64□□□□□ -0.07
EFCAB13-201ENST00000331493 MRPL50Q8N5N7 158 aaKnown RBP14.64□□□□□ -0.07
EFCAB13-201ENST00000331493 ZNF428Q96B54 188 aa14.64□□□□□ -0.07
EFCAB13-201ENST00000331493 RTF1Q92541 710 aaKnown RBP14.64□□□□□ -0.07
EFCAB13-201ENST00000331493 RRAGDQ9NQL2 400 aaPredicted RBP14.64□□□□□ -0.07
EFCAB13-201ENST00000331493 DDX11L8A8MPP1 907 aa14.63□□□□□ -0.07
EFCAB13-201ENST00000331493 POGZQ7Z3K3 1410 aa14.63□□□□□ -0.07
EFCAB13-201ENST00000331493 SSFA2P28290 1259 aa14.63□□□□□ -0.07
EFCAB13-201ENST00000331493 ALDH1L2Q3SY69 923 aa14.63□□□□□ -0.07
EFCAB13-201ENST00000331493 SLC26A8Q96RN1 970 aa14.63□□□□□ -0.07
EFCAB13-201ENST00000331493 API5Q9BZZ5 524 aaKnown RBP14.63□□□□□ -0.07
EFCAB13-201ENST00000331493 YTHDC2Q9H6S0 1430 aaKnown RBP14.63□□□□□ -0.07
EFCAB13-201ENST00000331493 SLC4A2P04920 1241 aa14.63□□□□□ -0.07
EFCAB13-201ENST00000331493 ANP32BQ92688 251 aaKnown RBP14.63□□□□□ -0.07
EFCAB13-201ENST00000331493 GCC1Q96CN9 775 aa14.62□□□□□ -0.07
EFCAB13-201ENST00000331493 INO80Q9ULG1 1556 aaPredicted RBP14.62□□□□□ -0.07
EFCAB13-201ENST00000331493 MCTP1Q6DN14 999 aa14.62□□□□□ -0.07
EFCAB13-201ENST00000331493 TRIM6-TRIM34B2RNG4 842 aa14.61□□□□□ -0.07
EFCAB13-201ENST00000331493 LMOD3Q0VAK6 560 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms