RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 PLEKHG5O94827 1062 aa26.07■■□□□ 1.76
RAB28-202ENST00000330852 CCDC125Q86Z20 511 aa26.07■■□□□ 1.76
RAB28-202ENST00000330852 COL14A1Q05707 1796 aaKnown RBP26.07■■□□□ 1.76
RAB28-202ENST00000330852 CRYBG1Q9Y4K1 1723 aa26.06■■□□□ 1.76
RAB28-202ENST00000330852 ONECUT3O60422 494 aaPredicted RBP26.03■■□□□ 1.76
RAB28-202ENST00000330852 SIN3AQ96ST3 1273 aa26.03■■□□□ 1.76
RAB28-202ENST00000330852 NRAPQ86VF7 1730 aa26.03■■□□□ 1.76
RAB28-202ENST00000330852 NBPF8Q3BBV2 869 aa26.02■■□□□ 1.76
RAB28-202ENST00000330852 ACEP12821 1306 aa26.02■■□□□ 1.76
RAB28-202ENST00000330852 TRPM1Q7Z4N2 1603 aa26.02■■□□□ 1.76
RAB28-202ENST00000330852 QRICH2Q9H0J4 1663 aa26.02■■□□□ 1.76
RAB28-202ENST00000330852 BRWD3Q6RI45 1802 aa26.02■■□□□ 1.76
RAB28-202ENST00000330852 CCDC9Q9Y3X0 531 aaKnown RBP26.01■■□□□ 1.75
RAB28-202ENST00000330852 SRPK2P78362 688 aaKnown RBP26■■□□□ 1.75
RAB28-202ENST00000330852 BTG4Q9NY30 223 aa26■■□□□ 1.75
RAB28-202ENST00000330852 NEUROD1Q13562 356 aa25.99■■□□□ 1.75
RAB28-202ENST00000330852 SEPT12Q8IYM1 358 aa25.98■■□□□ 1.75
RAB28-202ENST00000330852 BRD4O60885 1362 aaPredicted RBP25.98■■□□□ 1.75
RAB28-202ENST00000330852 PHRF1Q9P1Y6 1649 aaKnown RBP25.96■■□□□ 1.75
RAB28-202ENST00000330852 PRDM11Q9NQV5 511 aa25.96■■□□□ 1.75
RAB28-202ENST00000330852 PPIP5K1Q6PFW1 1433 aa25.96■■□□□ 1.75
RAB28-202ENST00000330852 EP400Q96L91 3159 aa25.96■■□□□ 1.75
RAB28-202ENST00000330852 ROCK2O75116 1388 aaKnown RBP25.93■■□□□ 1.74
RAB28-202ENST00000330852 CABP2Q9NPB3 220 aa25.93■■□□□ 1.74
RAB28-202ENST00000330852 EVC2Q86UK5 1308 aa25.92■■□□□ 1.74
RAB28-202ENST00000330852 ABTB2Q8N961 1025 aa25.92■■□□□ 1.74
RAB28-202ENST00000330852 BLMP54132 1417 aaPredicted RBP25.91■■□□□ 1.74
RAB28-202ENST00000330852 KIAA0232Q92628 1395 aa25.91■■□□□ 1.74
RAB28-202ENST00000330852 KRT27Q7Z3Y8 459 aa25.9■■□□□ 1.74
RAB28-202ENST00000330852 SPATA31A5Q5VU36 1347 aa25.9■■□□□ 1.74
RAB28-202ENST00000330852 SPATA31A7Q8IWB4 1347 aa25.9■■□□□ 1.74
RAB28-202ENST00000330852 NLRP13Q86W25 1043 aa25.89■■□□□ 1.74
RAB28-202ENST00000330852 NUTM2GQ5VZR2 741 aa25.88■■□□□ 1.73
RAB28-202ENST00000330852 USP19O94966 1318 aa25.87■■□□□ 1.73
RAB28-202ENST00000330852 FAM98CQ17RN3 349 aaKnown RBP25.87■■□□□ 1.73
RAB28-202ENST00000330852 CABP1Q9NZU7 370 aa25.87■■□□□ 1.73
RAB28-202ENST00000330852 CPDO75976 1380 aa25.86■■□□□ 1.73
RAB28-202ENST00000330852 ZC3H6P61129 1189 aaKnown RBP25.85■■□□□ 1.73
RAB28-202ENST00000330852 NRKQ7Z2Y5 1582 aa25.85■■□□□ 1.73
RAB28-202ENST00000330852 A0A0G2JS52 829 aa25.85■■□□□ 1.73
RAB28-202ENST00000330852 MYT1Q01538 1121 aa25.85■■□□□ 1.73
RAB28-202ENST00000330852 SF3B2Q13435 895 aaKnown RBP25.85■■□□□ 1.73
RAB28-202ENST00000330852 USP6P35125 1406 aa25.84■■□□□ 1.73
RAB28-202ENST00000330852 CHRNA2Q15822 529 aa25.83■■□□□ 1.73
RAB28-202ENST00000330852 ZNF692Q9BU19 519 aaPredicted RBP25.83■■□□□ 1.72
RAB28-202ENST00000330852 ZRANB1Q9UGI0 708 aa25.83■■□□□ 1.72
RAB28-202ENST00000330852 THSD7AQ9UPZ6 1657 aa25.82■■□□□ 1.72
RAB28-202ENST00000330852 SPATA31A1Q5TZJ5 1347 aa25.82■■□□□ 1.72
RAB28-202ENST00000330852 SBNO2Q9Y2G9 1366 aa25.81■■□□□ 1.72
RAB28-202ENST00000330852 GCP02774 474 aa25.81■■□□□ 1.72
RAB28-202ENST00000330852 TONSLQ96HA7 1378 aa25.8■■□□□ 1.72
RAB28-202ENST00000330852 TRIM26Q12899 539 aaPredicted RBP25.8■■□□□ 1.72
RAB28-202ENST00000330852 EVA1CP58658 441 aa25.8■■□□□ 1.72
RAB28-202ENST00000330852 SSH2Q76I76 1423 aa25.79■■□□□ 1.72
RAB28-202ENST00000330852 LMO7Q8WWI1 1683 aa25.79■■□□□ 1.72
RAB28-202ENST00000330852 AKAP12Q02952 1782 aa25.78■■□□□ 1.72
RAB28-202ENST00000330852 STRN4Q9NRL3 753 aa25.78■■□□□ 1.72
RAB28-202ENST00000330852 CAMTA1Q9Y6Y1 1673 aa25.77■■□□□ 1.72
RAB28-202ENST00000330852 NLRP6P59044 892 aa25.77■■□□□ 1.72
RAB28-202ENST00000330852 CARD11Q9BXL7 1154 aa25.77■■□□□ 1.72
RAB28-202ENST00000330852 BARGINQ6ZT62 677 aa25.75■■□□□ 1.71
RAB28-202ENST00000330852 SLIT3O75094 1523 aa25.75■■□□□ 1.71
RAB28-202ENST00000330852 PIK3C2AO00443 1686 aa25.73■■□□□ 1.71
RAB28-202ENST00000330852 RGPD1P0DJD0 1748 aa25.73■■□□□ 1.71
RAB28-202ENST00000330852 TTC21AQ8NDW8 1320 aa25.73■■□□□ 1.71
RAB28-202ENST00000330852 CPSF1Q10570 1443 aaKnown RBP25.72■■□□□ 1.71
RAB28-202ENST00000330852 BAG6P46379 1132 aa25.71■■□□□ 1.71
RAB28-202ENST00000330852 DEFB132Q7Z7B7 95 aa25.71■■□□□ 1.71
RAB28-202ENST00000330852 THRAP3Q9Y2W1 955 aaKnown RBP25.71■■□□□ 1.71
RAB28-202ENST00000330852 TTC21BQ7Z4L5 1316 aa25.71■■□□□ 1.71
RAB28-202ENST00000330852 AATKQ6ZMQ8 1374 aa25.71■■□□□ 1.71
RAB28-202ENST00000330852 TCP11L2Q8N4U5 519 aa25.7■■□□□ 1.7
RAB28-202ENST00000330852 LARP1Q6PKG0 1096 aaKnown RBP25.69■■□□□ 1.7
RAB28-202ENST00000330852 KCNH5Q8NCM2 988 aa25.68■■□□□ 1.7
RAB28-202ENST00000330852 COL5A2P05997 1499 aaPredicted RBP25.68■■□□□ 1.7
RAB28-202ENST00000330852 FAM196AQ6ZSG2 479 aa25.68■■□□□ 1.7
RAB28-202ENST00000330852 PUS7Q96PZ0 661 aaKnown RBP25.68■■□□□ 1.7
RAB28-202ENST00000330852 USP35Q9P2H5 1018 aa25.68■■□□□ 1.7
RAB28-202ENST00000330852 KTN1Q86UP2 1357 aaKnown RBP25.67■■□□□ 1.7
RAB28-202ENST00000330852 MON2Q7Z3U7 1717 aa25.67■■□□□ 1.7
RAB28-202ENST00000330852 SLC24A1O60721 1099 aa25.66■■□□□ 1.7
RAB28-202ENST00000330852 COL18A1P39060 1754 aa25.65■■□□□ 1.7
RAB28-202ENST00000330852 CRB1P82279 1406 aa25.65■■□□□ 1.7
RAB28-202ENST00000330852 PDE3BQ13370 1112 aa25.64■■□□□ 1.7
RAB28-202ENST00000330852 DISP2A7MBM2 1401 aa25.63■■□□□ 1.69
RAB28-202ENST00000330852 FAM182BQ5T319 152 aa25.63■■□□□ 1.69
RAB28-202ENST00000330852 TNS1Q9HBL0 1735 aaKnown RBP25.62■■□□□ 1.69
RAB28-202ENST00000330852 PARP4Q9UKK3 1724 aaKnown RBP25.62■■□□□ 1.69
RAB28-202ENST00000330852 C11orf95C9JLR9 678 aaPredicted RBP25.62■■□□□ 1.69
RAB28-202ENST00000330852 ARHGEF25Q86VW2 580 aa25.62■■□□□ 1.69
RAB28-202ENST00000330852 ZBTB7CA1YPR0 619 aa25.6■■□□□ 1.69
RAB28-202ENST00000330852 USP54Q70EL1 1684 aa25.59■■□□□ 1.69
RAB28-202ENST00000330852 HDGFL2Q7Z4V5 671 aaPredicted RBP25.59■■□□□ 1.69
RAB28-202ENST00000330852 USP31Q70CQ4 1352 aa25.59■■□□□ 1.69
RAB28-202ENST00000330852 ABCC6O95255 1503 aa25.58■■□□□ 1.69
RAB28-202ENST00000330852 TMC1Q8TDI8 760 aa25.57■■□□□ 1.68
RAB28-202ENST00000330852 TERF2IPQ9NYB0 399 aa25.57■■□□□ 1.68
RAB28-202ENST00000330852 RGPD5Q99666 1765 aa25.57■■□□□ 1.68
RAB28-202ENST00000330852 CD163L1Q9NR16 1453 aa25.57■■□□□ 1.68
RAB28-202ENST00000330852 WDR17Q8IZU2 1322 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms