RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 MYO5BQ9ULV0 1848 aa21.66■■□□□ 1.06
PRKCD-201ENST00000330452 DMTNQ08495 405 aa21.65■■□□□ 1.06
PRKCD-201ENST00000330452 PRDM10Q9NQV6 1147 aa21.65■■□□□ 1.06
PRKCD-201ENST00000330452 MINK1Q8N4C8 1332 aaPredicted RBP21.65■■□□□ 1.06
PRKCD-201ENST00000330452 MTHFSP49914 203 aa21.65■■□□□ 1.06
PRKCD-201ENST00000330452 NGEFQ8N5V2 710 aa21.65■■□□□ 1.06
PRKCD-201ENST00000330452 PLCD3Q8N3E9 789 aa21.64■■□□□ 1.06
PRKCD-201ENST00000330452 C8orf34Q49A92 452 aa21.64■■□□□ 1.05
PRKCD-201ENST00000330452 RPGRIP1LQ68CZ1 1315 aa21.64■■□□□ 1.05
PRKCD-201ENST00000330452 TCP11L2Q8N4U5 519 aa21.63■■□□□ 1.05
PRKCD-201ENST00000330452 CEBPAP49715 358 aaPredicted RBP21.63■■□□□ 1.05
PRKCD-201ENST00000330452 FAM161AQ3B820 660 aa21.63■■□□□ 1.05
PRKCD-201ENST00000330452 PPP4R3BQ5MIZ7 849 aa21.63■■□□□ 1.05
PRKCD-201ENST00000330452 IGHDP01880 384 aa21.63■■□□□ 1.05
PRKCD-201ENST00000330452 PANK1Q8TE04 598 aa21.63■■□□□ 1.05
PRKCD-201ENST00000330452 RUNDC1Q96C34 613 aa21.63■■□□□ 1.05
PRKCD-201ENST00000330452 ZC3H13Q5T200 1668 aaKnown RBP21.62■■□□□ 1.05
PRKCD-201ENST00000330452 TRHP20396 242 aaPredicted RBP21.62■■□□□ 1.05
PRKCD-201ENST00000330452 SLC52A1Q9NWF4 448 aa21.62■■□□□ 1.05
PRKCD-201ENST00000330452 FTSJ3Q8IY81 847 aaKnown RBP21.61■■□□□ 1.05
PRKCD-201ENST00000330452 COG6Q9Y2V7 657 aa21.61■■□□□ 1.05
PRKCD-201ENST00000330452 SHPRHQ149N8 1683 aa21.61■■□□□ 1.05
PRKCD-201ENST00000330452 CGNL1Q0VF96 1302 aa21.61■■□□□ 1.05
PRKCD-201ENST00000330452 ESF1Q9H501 851 aaKnown RBP21.61■■□□□ 1.05
PRKCD-201ENST00000330452 FAM13BQ9NYF5 915 aa21.61■■□□□ 1.05
PRKCD-201ENST00000330452 VGLL3A8MV65 326 aa21.6■■□□□ 1.05
PRKCD-201ENST00000330452 ZFP91Q96JP5 570 aaPredicted RBP21.6■■□□□ 1.05
PRKCD-201ENST00000330452 PIK3C2BO00750 1634 aa21.6■■□□□ 1.05
PRKCD-201ENST00000330452 PRAM1Q96QH2 718 aa21.6■■□□□ 1.05
PRKCD-201ENST00000330452 NEXMIFQ5QGS0 1516 aa21.59■■□□□ 1.05
PRKCD-201ENST00000330452 WAPLQ7Z5K2 1190 aa21.59■■□□□ 1.05
PRKCD-201ENST00000330452 KIF13AQ9H1H9 1805 aa21.58■■□□□ 1.05
PRKCD-201ENST00000330452 EVC2Q86UK5 1308 aa21.58■■□□□ 1.05
PRKCD-201ENST00000330452 SRPK2P78362 688 aaKnown RBP21.58■■□□□ 1.05
PRKCD-201ENST00000330452 PDE3AQ14432 1141 aa21.58■■□□□ 1.04
PRKCD-201ENST00000330452 MYH16Q9H6N6 1097 aa21.57■■□□□ 1.04
PRKCD-201ENST00000330452 CLTCQ00610 1675 aaKnown RBP21.56■■□□□ 1.04
PRKCD-201ENST00000330452 PREX1Q8TCU6 1659 aa21.56■■□□□ 1.04
PRKCD-201ENST00000330452 CFAP53Q96M91 514 aa21.55■■□□□ 1.04
PRKCD-201ENST00000330452 BCL2L13Q9BXK5 485 aa21.55■■□□□ 1.04
PRKCD-201ENST00000330452 TULP4Q9NRJ4 1543 aa21.55■■□□□ 1.04
PRKCD-201ENST00000330452 BRD2P25440 801 aaKnown RBP21.55■■□□□ 1.04
PRKCD-201ENST00000330452 MRE11P49959 708 aa21.55■■□□□ 1.04
PRKCD-201ENST00000330452 RARSP54136 660 aaKnown RBP21.55■■□□□ 1.04
PRKCD-201ENST00000330452 CLUAP1Q96AJ1 413 aa21.55■■□□□ 1.04
PRKCD-201ENST00000330452 TNNQ9UQP3 1299 aa21.55■■□□□ 1.04
PRKCD-201ENST00000330452 PHF23Q9BUL5 403 aaPredicted RBP21.54■■□□□ 1.04
PRKCD-201ENST00000330452 IQSEC2Q5JU85 1478 aa21.54■■□□□ 1.04
PRKCD-201ENST00000330452 ARHGAP31Q2M1Z3 1444 aa21.54■■□□□ 1.04
PRKCD-201ENST00000330452 ZSCAN20P17040 1043 aaPredicted RBP21.54■■□□□ 1.04
PRKCD-201ENST00000330452 DHX37Q8IY37 1157 aaKnown RBP21.54■■□□□ 1.04
PRKCD-201ENST00000330452 ANKRD36BQ8N2N9 1353 aa21.53■■□□□ 1.04
PRKCD-201ENST00000330452 U2AF1L5P0DN76 240 aaPredicted RBP21.53■■□□□ 1.04
PRKCD-201ENST00000330452 TERF1P54274 439 aa21.53■■□□□ 1.04
PRKCD-201ENST00000330452 U2AF1Q01081 240 aaKnown RBP eCLIP21.53■■□□□ 1.04
PRKCD-201ENST00000330452 ANP32BQ92688 251 aaKnown RBP21.52■■□□□ 1.04
PRKCD-201ENST00000330452 WDR63Q8IWG1 891 aa21.52■■□□□ 1.03
PRKCD-201ENST00000330452 RLBP1P12271 317 aa21.51■■□□□ 1.03
PRKCD-201ENST00000330452 ARID3AQ99856 593 aa21.51■■□□□ 1.03
PRKCD-201ENST00000330452 ARHGEF28Q8N1W1 1705 aaKnown RBP21.5■■□□□ 1.03
PRKCD-201ENST00000330452 FBLN1P23142 703 aa21.5■■□□□ 1.03
PRKCD-201ENST00000330452 TRIM44Q96DX7 344 aaPredicted RBP21.5■■□□□ 1.03
PRKCD-201ENST00000330452 OFD1O75665 1012 aa21.5■■□□□ 1.03
PRKCD-201ENST00000330452 USP32Q8NFA0 1604 aa21.5■■□□□ 1.03
PRKCD-201ENST00000330452 ZMYM3Q14202 1370 aa21.49■■□□□ 1.03
PRKCD-201ENST00000330452 TMEM131LA2VDJ0 1609 aa21.49■■□□□ 1.03
PRKCD-201ENST00000330452 PUS7Q96PZ0 661 aaKnown RBP21.49■■□□□ 1.03
PRKCD-201ENST00000330452 NINLQ9Y2I6 1382 aa21.49■■□□□ 1.03
PRKCD-201ENST00000330452 GZF1Q9H116 711 aaPredicted RBP21.49■■□□□ 1.03
PRKCD-201ENST00000330452 GGNBP2Q9H3C7 697 aa21.48■■□□□ 1.03
PRKCD-201ENST00000330452 NCKAP5LQ9HCH0 1330 aa21.48■■□□□ 1.03
PRKCD-201ENST00000330452 MTERF4Q7Z6M4 381 aaKnown RBP21.48■■□□□ 1.03
PRKCD-201ENST00000330452 TEX2Q8IWB9 1127 aa21.48■■□□□ 1.03
PRKCD-201ENST00000330452 NUTM2FA1L443 756 aa21.47■■□□□ 1.03
PRKCD-201ENST00000330452 CCDC27Q2M243 656 aa21.47■■□□□ 1.03
PRKCD-201ENST00000330452 A0A1W2PP64 1363 aa21.47■■□□□ 1.03
PRKCD-201ENST00000330452 TXNDC2Q86VQ3 553 aa21.46■■□□□ 1.03
PRKCD-201ENST00000330452 KIF20AO95235 890 aa21.46■■□□□ 1.03
PRKCD-201ENST00000330452 GRPEL1Q9HAV7 217 aa21.46■■□□□ 1.03
PRKCD-201ENST00000330452 PCDHB15Q9Y5E8 787 aa21.46■■□□□ 1.03
PRKCD-201ENST00000330452 CHRM1P11229 460 aaPredicted RBP21.45■■□□□ 1.02
PRKCD-201ENST00000330452 NSD2O96028 1365 aa21.45■■□□□ 1.02
PRKCD-201ENST00000330452 U2SURPO15042 1029 aaKnown RBP21.44■■□□□ 1.02
PRKCD-201ENST00000330452 SECISBP2LQ93073 1101 aaKnown RBP21.44■■□□□ 1.02
PRKCD-201ENST00000330452 TSR2Q969E8 191 aaKnown RBP21.43■■□□□ 1.02
PRKCD-201ENST00000330452 SLKQ9H2G2 1235 aaPredicted RBP21.43■■□□□ 1.02
PRKCD-201ENST00000330452 YTHDC2Q9H6S0 1430 aaKnown RBP21.43■■□□□ 1.02
PRKCD-201ENST00000330452 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.42■■□□□ 1.02
PRKCD-201ENST00000330452 SEC24BO95487 1268 aa21.42■■□□□ 1.02
PRKCD-201ENST00000330452 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.42■■□□□ 1.02
PRKCD-201ENST00000330452 CDK19Q9BWU1 502 aa21.42■■□□□ 1.02
PRKCD-201ENST00000330452 CABP1Q9NZU7 370 aa21.42■■□□□ 1.02
PRKCD-201ENST00000330452 ABCC11Q96J66 1382 aa21.41■■□□□ 1.02
PRKCD-201ENST00000330452 RIMS2Q9UQ26 1411 aa21.41■■□□□ 1.02
PRKCD-201ENST00000330452 A2ML1A8K2U0 1454 aa21.41■■□□□ 1.02
PRKCD-201ENST00000330452 CHMP4AQ9BY43 222 aa21.41■■□□□ 1.02
PRKCD-201ENST00000330452 FYB1O15117 783 aa21.4■■□□□ 1.02
PRKCD-201ENST00000330452 USP19O94966 1318 aa21.4■■□□□ 1.02
PRKCD-201ENST00000330452 MAPK8IP3Q9UPT6 1336 aa21.4■■□□□ 1.02
PRKCD-201ENST00000330452 METP08581 1390 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms