RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 L3MBTL2Q969R5 705 aa19.6■□□□□ 0.73
GTF3C6-201ENST00000329970 PHRF1Q9P1Y6 1649 aaKnown RBP19.6■□□□□ 0.73
GTF3C6-201ENST00000329970 VPS72Q15906 364 aa19.59■□□□□ 0.73
GTF3C6-201ENST00000329970 CCDC61Q9Y6R9 512 aa19.59■□□□□ 0.73
GTF3C6-201ENST00000329970 CENPJQ9HC77 1338 aaPredicted RBP19.58■□□□□ 0.73
GTF3C6-201ENST00000329970 PLEKHG3A1L390 1219 aa19.58■□□□□ 0.72
GTF3C6-201ENST00000329970 FAM83GA6ND36 823 aa19.56■□□□□ 0.72
GTF3C6-201ENST00000329970 ONECUT3O60422 494 aaPredicted RBP19.56■□□□□ 0.72
GTF3C6-201ENST00000329970 ACEP12821 1306 aa19.54■□□□□ 0.72
GTF3C6-201ENST00000329970 CCDC125Q86Z20 511 aa19.54■□□□□ 0.72
GTF3C6-201ENST00000329970 SIN3AQ96ST3 1273 aa19.54■□□□□ 0.72
GTF3C6-201ENST00000329970 BRD4O60885 1362 aaPredicted RBP19.54■□□□□ 0.72
GTF3C6-201ENST00000329970 NBPF8Q3BBV2 869 aa19.53■□□□□ 0.72
GTF3C6-201ENST00000329970 PAK3O75914 559 aaPredicted RBP19.52■□□□□ 0.72
GTF3C6-201ENST00000329970 PPIP5K1Q6PFW1 1433 aa19.51■□□□□ 0.71
GTF3C6-201ENST00000329970 NRKQ7Z2Y5 1582 aa19.51■□□□□ 0.71
GTF3C6-201ENST00000329970 ROCK2O75116 1388 aaKnown RBP19.49■□□□□ 0.71
GTF3C6-201ENST00000329970 SRPK2P78362 688 aaKnown RBP19.49■□□□□ 0.71
GTF3C6-201ENST00000329970 BTG4Q9NY30 223 aa19.49■□□□□ 0.71
GTF3C6-201ENST00000329970 PLEKHG5O94827 1062 aa19.48■□□□□ 0.71
GTF3C6-201ENST00000329970 SEPT12Q8IYM1 358 aa19.48■□□□□ 0.71
GTF3C6-201ENST00000329970 THSD7AQ9UPZ6 1657 aa19.48■□□□□ 0.71
GTF3C6-201ENST00000329970 AKAP12Q02952 1782 aa19.47■□□□□ 0.71
GTF3C6-201ENST00000329970 NEUROD1Q13562 356 aa19.47■□□□□ 0.71
GTF3C6-201ENST00000329970 BLMP54132 1417 aaPredicted RBP19.47■□□□□ 0.71
GTF3C6-201ENST00000329970 USP19O94966 1318 aa19.47■□□□□ 0.71
GTF3C6-201ENST00000329970 LMO7Q8WWI1 1683 aa19.46■□□□□ 0.71
GTF3C6-201ENST00000329970 CABP2Q9NPB3 220 aa19.46■□□□□ 0.71
GTF3C6-201ENST00000329970 PRDM11Q9NQV5 511 aa19.46■□□□□ 0.71
GTF3C6-201ENST00000329970 EVC2Q86UK5 1308 aa19.46■□□□□ 0.71
GTF3C6-201ENST00000329970 CPDO75976 1380 aa19.45■□□□□ 0.7
GTF3C6-201ENST00000329970 KIAA0232Q92628 1395 aa19.45■□□□□ 0.7
GTF3C6-201ENST00000329970 SBNO2Q9Y2G9 1366 aa19.45■□□□□ 0.7
GTF3C6-201ENST00000329970 USP6P35125 1406 aa19.45■□□□□ 0.7
GTF3C6-201ENST00000329970 CCDC9Q9Y3X0 531 aaKnown RBP19.45■□□□□ 0.7
GTF3C6-201ENST00000329970 SPATA31A5Q5VU36 1347 aa19.45■□□□□ 0.7
GTF3C6-201ENST00000329970 SPATA31A7Q8IWB4 1347 aa19.45■□□□□ 0.7
GTF3C6-201ENST00000329970 SSH2Q76I76 1423 aa19.43■□□□□ 0.7
GTF3C6-201ENST00000329970 ABTB2Q8N961 1025 aa19.43■□□□□ 0.7
GTF3C6-201ENST00000329970 SLIT3O75094 1523 aa19.42■□□□□ 0.7
GTF3C6-201ENST00000329970 KRT27Q7Z3Y8 459 aa19.42■□□□□ 0.7
GTF3C6-201ENST00000329970 NLRP13Q86W25 1043 aa19.42■□□□□ 0.7
GTF3C6-201ENST00000329970 PIK3C2AO00443 1686 aa19.41■□□□□ 0.7
GTF3C6-201ENST00000329970 RGPD1P0DJD0 1748 aa19.4■□□□□ 0.7
GTF3C6-201ENST00000329970 CABP1Q9NZU7 370 aa19.4■□□□□ 0.7
GTF3C6-201ENST00000329970 CAMTA1Q9Y6Y1 1673 aa19.4■□□□□ 0.7
GTF3C6-201ENST00000329970 MON2Q7Z3U7 1717 aa19.39■□□□□ 0.7
GTF3C6-201ENST00000329970 FAM98CQ17RN3 349 aaKnown RBP19.39■□□□□ 0.69
GTF3C6-201ENST00000329970 NUTM2GQ5VZR2 741 aa19.39■□□□□ 0.69
GTF3C6-201ENST00000329970 SPATA31A1Q5TZJ5 1347 aa19.39■□□□□ 0.69
GTF3C6-201ENST00000329970 ZC3H6P61129 1189 aaKnown RBP19.38■□□□□ 0.69
GTF3C6-201ENST00000329970 TRIM26Q12899 539 aaPredicted RBP19.38■□□□□ 0.69
GTF3C6-201ENST00000329970 TONSLQ96HA7 1378 aa19.38■□□□□ 0.69
GTF3C6-201ENST00000329970 GCP02774 474 aa19.37■□□□□ 0.69
GTF3C6-201ENST00000329970 CHRNA2Q15822 529 aa19.37■□□□□ 0.69
GTF3C6-201ENST00000329970 ZNF692Q9BU19 519 aaPredicted RBP19.37■□□□□ 0.69
GTF3C6-201ENST00000329970 USP54Q70EL1 1684 aa19.36■□□□□ 0.69
GTF3C6-201ENST00000329970 CPSF1Q10570 1443 aaKnown RBP19.36■□□□□ 0.69
GTF3C6-201ENST00000329970 COL18A1P39060 1754 aa19.36■□□□□ 0.69
GTF3C6-201ENST00000329970 TNS1Q9HBL0 1735 aaKnown RBP19.34■□□□□ 0.69
GTF3C6-201ENST00000329970 SF3B2Q13435 895 aaKnown RBP19.34■□□□□ 0.69
GTF3C6-201ENST00000329970 BARGINQ6ZT62 677 aa19.34■□□□□ 0.69
GTF3C6-201ENST00000329970 CARD11Q9BXL7 1154 aa19.34■□□□□ 0.69
GTF3C6-201ENST00000329970 COL5A2P05997 1499 aaPredicted RBP19.34■□□□□ 0.69
GTF3C6-201ENST00000329970 PARP4Q9UKK3 1724 aaKnown RBP19.34■□□□□ 0.69
GTF3C6-201ENST00000329970 TTC21AQ8NDW8 1320 aa19.33■□□□□ 0.69
GTF3C6-201ENST00000329970 A0A0G2JS52 829 aa19.33■□□□□ 0.68
GTF3C6-201ENST00000329970 MYT1Q01538 1121 aa19.33■□□□□ 0.68
GTF3C6-201ENST00000329970 ZRANB1Q9UGI0 708 aa19.33■□□□□ 0.68
GTF3C6-201ENST00000329970 NLRP6P59044 892 aa19.32■□□□□ 0.68
GTF3C6-201ENST00000329970 AATKQ6ZMQ8 1374 aa19.32■□□□□ 0.68
GTF3C6-201ENST00000329970 WNK3Q9BYP7 1800 aa19.31■□□□□ 0.68
GTF3C6-201ENST00000329970 STRN4Q9NRL3 753 aa19.31■□□□□ 0.68
GTF3C6-201ENST00000329970 THRAP3Q9Y2W1 955 aaKnown RBP19.31■□□□□ 0.68
GTF3C6-201ENST00000329970 DISP2A7MBM2 1401 aa19.31■□□□□ 0.68
GTF3C6-201ENST00000329970 ABCC6O95255 1503 aa19.3■□□□□ 0.68
GTF3C6-201ENST00000329970 TTC21BQ7Z4L5 1316 aa19.3■□□□□ 0.68
GTF3C6-201ENST00000329970 EVA1CP58658 441 aa19.3■□□□□ 0.68
GTF3C6-201ENST00000329970 PUS7Q96PZ0 661 aaKnown RBP19.3■□□□□ 0.68
GTF3C6-201ENST00000329970 RGPD5Q99666 1765 aa19.29■□□□□ 0.68
GTF3C6-201ENST00000329970 CD163L1Q9NR16 1453 aa19.28■□□□□ 0.68
GTF3C6-201ENST00000329970 CRB1P82279 1406 aa19.28■□□□□ 0.68
GTF3C6-201ENST00000329970 LARP1Q6PKG0 1096 aaKnown RBP19.28■□□□□ 0.68
GTF3C6-201ENST00000329970 DEFB132Q7Z7B7 95 aa19.28■□□□□ 0.68
GTF3C6-201ENST00000329970 TCP11L2Q8N4U5 519 aa19.28■□□□□ 0.68
GTF3C6-201ENST00000329970 KTN1Q86UP2 1357 aaKnown RBP19.28■□□□□ 0.68
GTF3C6-201ENST00000329970 NFAT5O94916 1531 aa19.27■□□□□ 0.68
GTF3C6-201ENST00000329970 BAG6P46379 1132 aa19.27■□□□□ 0.68
GTF3C6-201ENST00000329970 KCNH5Q8NCM2 988 aa19.27■□□□□ 0.68
GTF3C6-201ENST00000329970 SRCAPQ6ZRS2 3230 aa19.26■□□□□ 0.67
GTF3C6-201ENST00000329970 USP31Q70CQ4 1352 aa19.25■□□□□ 0.67
GTF3C6-201ENST00000329970 SLC24A1O60721 1099 aa19.24■□□□□ 0.67
GTF3C6-201ENST00000329970 FAM196AQ6ZSG2 479 aa19.24■□□□□ 0.67
GTF3C6-201ENST00000329970 ARHGEF25Q86VW2 580 aa19.24■□□□□ 0.67
GTF3C6-201ENST00000329970 NINLQ9Y2I6 1382 aa19.23■□□□□ 0.67
GTF3C6-201ENST00000329970 LRRC37A3O60309 1634 aa19.23■□□□□ 0.67
GTF3C6-201ENST00000329970 USP35Q9P2H5 1018 aa19.23■□□□□ 0.67
GTF3C6-201ENST00000329970 PEAK1Q9H792 1746 aa19.22■□□□□ 0.67
GTF3C6-201ENST00000329970 LTN1O94822 1766 aa19.22■□□□□ 0.67
GTF3C6-201ENST00000329970 SBF2Q86WG5 1849 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms