RNA–Protein interactions for RNA: ENST00000329913.3

GDF3-201, Transcript of growth differentiation factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF3, Length 1,239 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3-201ENST00000329913 DHX57Q6P158 1386 aaKnown RBP13.94□□□□□ -0.18
GDF3-201ENST00000329913 PRR36Q9H6K5 1346 aa13.93□□□□□ -0.18
GDF3-201ENST00000329913 KRT27Q7Z3Y8 459 aa13.93□□□□□ -0.18
GDF3-201ENST00000329913 KDM2AQ9Y2K7 1162 aa13.93□□□□□ -0.18
GDF3-201ENST00000329913 SF3B2Q13435 895 aaKnown RBP13.92□□□□□ -0.18
GDF3-201ENST00000329913 CCDC125Q86Z20 511 aa13.92□□□□□ -0.18
GDF3-201ENST00000329913 BTG4Q9NY30 223 aa13.92□□□□□ -0.18
GDF3-201ENST00000329913 NRAPQ86VF7 1730 aa13.92□□□□□ -0.18
GDF3-201ENST00000329913 SBNO1A3KN83 1393 aa13.91□□□□□ -0.18
GDF3-201ENST00000329913 TRPM3Q9HCF6 1732 aaPredicted RBP13.9□□□□□ -0.18
GDF3-201ENST00000329913 ARHGEF10O15013 1369 aa13.9□□□□□ -0.18
GDF3-201ENST00000329913 ADGRB1O14514 1584 aa13.9□□□□□ -0.18
GDF3-201ENST00000329913 NWD2Q9ULI1 1742 aa13.9□□□□□ -0.18
GDF3-201ENST00000329913 PAK3O75914 559 aaPredicted RBP13.89□□□□□ -0.19
GDF3-201ENST00000329913 NUTM2GQ5VZR2 741 aa13.89□□□□□ -0.19
GDF3-201ENST00000329913 RAB3GAP2Q9H2M9 1393 aa13.88□□□□□ -0.19
GDF3-201ENST00000329913 EN1Q05925 392 aaPredicted RBP13.88□□□□□ -0.19
GDF3-201ENST00000329913 ACIN1Q9UKV3 1341 aaKnown RBP13.88□□□□□ -0.19
GDF3-201ENST00000329913 DLC1Q96QB1 1528 aa13.87□□□□□ -0.19
GDF3-201ENST00000329913 CHRNA2Q15822 529 aa13.87□□□□□ -0.19
GDF3-201ENST00000329913 SIRT1Q96EB6 747 aa13.87□□□□□ -0.19
GDF3-201ENST00000329913 ALS2Q96Q42 1657 aa13.87□□□□□ -0.19
GDF3-201ENST00000329913 ADGRB2O60241 1585 aa13.87□□□□□ -0.19
GDF3-201ENST00000329913 NGDNQ8NEJ9 315 aaKnown RBP13.86□□□□□ -0.19
GDF3-201ENST00000329913 ANKARQ7Z5J8 1434 aa13.86□□□□□ -0.19
GDF3-201ENST00000329913 ONECUT3O60422 494 aaPredicted RBP13.85□□□□□ -0.19
GDF3-201ENST00000329913 DCAF11Q8TEB1 546 aa13.85□□□□□ -0.19
GDF3-201ENST00000329913 TULP4Q9NRJ4 1543 aa13.85□□□□□ -0.19
GDF3-201ENST00000329913 GPRASP1Q5JY77 1395 aa13.84□□□□□ -0.19
GDF3-201ENST00000329913 CRYBG1Q9Y4K1 1723 aa13.84□□□□□ -0.19
GDF3-201ENST00000329913 COL14A1Q05707 1796 aaKnown RBP13.84□□□□□ -0.19
GDF3-201ENST00000329913 BAG6P46379 1132 aa13.84□□□□□ -0.19
GDF3-201ENST00000329913 R3HDM1Q15032 1099 aaKnown RBP13.84□□□□□ -0.19
GDF3-201ENST00000329913 PRDM11Q9NQV5 511 aa13.84□□□□□ -0.19
GDF3-201ENST00000329913 STRN4Q9NRL3 753 aa13.84□□□□□ -0.19
GDF3-201ENST00000329913 USP35Q9P2H5 1018 aa13.84□□□□□ -0.19
GDF3-201ENST00000329913 WASLO00401 505 aaPredicted RBP13.83□□□□□ -0.2
GDF3-201ENST00000329913 HRCP23327 699 aa13.83□□□□□ -0.2
GDF3-201ENST00000329913 ZC3H6P61129 1189 aaKnown RBP13.83□□□□□ -0.2
GDF3-201ENST00000329913 SPATA31A5Q5VU36 1347 aa13.83□□□□□ -0.2
GDF3-201ENST00000329913 SPATA31A7Q8IWB4 1347 aa13.83□□□□□ -0.2
GDF3-201ENST00000329913 KIAA0232Q92628 1395 aa13.83□□□□□ -0.2
GDF3-201ENST00000329913 EZH2Q15910 746 aaKnown RBP13.82□□□□□ -0.2
GDF3-201ENST00000329913 ATP7BP35670 1465 aa13.81□□□□□ -0.2
GDF3-201ENST00000329913 LRP5O75197 1615 aa13.81□□□□□ -0.2
GDF3-201ENST00000329913 THSD7AQ9UPZ6 1657 aa13.81□□□□□ -0.2
GDF3-201ENST00000329913 TRIM37O94972 964 aa13.8□□□□□ -0.2
GDF3-201ENST00000329913 SPINK5Q9NQ38 1064 aaPredicted RBP13.8□□□□□ -0.2
GDF3-201ENST00000329913 ARHGEF28Q8N1W1 1705 aaKnown RBP13.8□□□□□ -0.2
GDF3-201ENST00000329913 TNS1Q9HBL0 1735 aaKnown RBP13.8□□□□□ -0.2
GDF3-201ENST00000329913 PHRF1Q9P1Y6 1649 aaKnown RBP13.79□□□□□ -0.2
GDF3-201ENST00000329913 NUDT16Q96DE0 195 aaKnown RBP13.79□□□□□ -0.2
GDF3-201ENST00000329913 RGPD1P0DJD0 1748 aa13.78□□□□□ -0.2
GDF3-201ENST00000329913 ZBTB7CA1YPR0 619 aa13.78□□□□□ -0.2
GDF3-201ENST00000329913 SPATA31A1Q5TZJ5 1347 aa13.77□□□□□ -0.21
GDF3-201ENST00000329913 CDK19Q9BWU1 502 aa13.77□□□□□ -0.21
GDF3-201ENST00000329913 ZNF219Q9P2Y4 722 aaPredicted RBP13.77□□□□□ -0.21
GDF3-201ENST00000329913 EIF3AQ14152 1382 aaKnown RBP13.76□□□□□ -0.21
GDF3-201ENST00000329913 ACEP12821 1306 aa13.75□□□□□ -0.21
GDF3-201ENST00000329913 LARP1Q6PKG0 1096 aaKnown RBP13.75□□□□□ -0.21
GDF3-201ENST00000329913 NRKQ7Z2Y5 1582 aa13.75□□□□□ -0.21
GDF3-201ENST00000329913 ITSN1Q15811 1721 aa13.74□□□□□ -0.21
GDF3-201ENST00000329913 APBA3O96018 575 aa13.74□□□□□ -0.21
GDF3-201ENST00000329913 SSH2Q76I76 1423 aa13.73□□□□□ -0.21
GDF3-201ENST00000329913 TOPAZ1Q8N9V7 1692 aa13.73□□□□□ -0.21
GDF3-201ENST00000329913 CAPN15O75808 1086 aa13.73□□□□□ -0.21
GDF3-201ENST00000329913 NBPF1Q3BBV0 1214 aa13.73□□□□□ -0.21
GDF3-201ENST00000329913 CAMKK2Q96RR4 588 aa13.73□□□□□ -0.21
GDF3-201ENST00000329913 CAMTA1Q9Y6Y1 1673 aa13.72□□□□□ -0.21
GDF3-201ENST00000329913 EVA1CP58658 441 aa13.72□□□□□ -0.21
GDF3-201ENST00000329913 NBPF8Q3BBV2 869 aa13.71□□□□□ -0.21
GDF3-201ENST00000329913 ABTB2Q8N961 1025 aa13.71□□□□□ -0.21
GDF3-201ENST00000329913 CABP2Q9NPB3 220 aa13.71□□□□□ -0.21
GDF3-201ENST00000329913 DISP2A7MBM2 1401 aa13.7□□□□□ -0.22
GDF3-201ENST00000329913 SRPK2P78362 688 aaKnown RBP13.69□□□□□ -0.22
GDF3-201ENST00000329913 PDE3BQ13370 1112 aa13.69□□□□□ -0.22
GDF3-201ENST00000329913 FAM196AQ6ZSG2 479 aa13.69□□□□□ -0.22
GDF3-201ENST00000329913 POLR3AO14802 1390 aaPredicted RBP13.69□□□□□ -0.22
GDF3-201ENST00000329913 NUP188Q5SRE5 1749 aa13.68□□□□□ -0.22
GDF3-201ENST00000329913 PPIP5K1Q6PFW1 1433 aa13.68□□□□□ -0.22
GDF3-201ENST00000329913 LMO7Q8WWI1 1683 aa13.68□□□□□ -0.22
GDF3-201ENST00000329913 RREB1Q92766 1687 aa13.67□□□□□ -0.22
GDF3-201ENST00000329913 SOX12O15370 315 aa13.67□□□□□ -0.22
GDF3-201ENST00000329913 PTF1AQ7RTS3 328 aa13.67□□□□□ -0.22
GDF3-201ENST00000329913 CCDC61Q9Y6R9 512 aa13.67□□□□□ -0.22
GDF3-201ENST00000329913 USP19O94966 1318 aa13.66□□□□□ -0.22
GDF3-201ENST00000329913 TCP11L2Q8N4U5 519 aa13.66□□□□□ -0.22
GDF3-201ENST00000329913 COL5A2P05997 1499 aaPredicted RBP13.66□□□□□ -0.22
GDF3-201ENST00000329913 PLEKHG3A1L390 1219 aa13.65□□□□□ -0.22
GDF3-201ENST00000329913 GCP02774 474 aa13.65□□□□□ -0.22
GDF3-201ENST00000329913 BARGINQ6ZT62 677 aa13.64□□□□□ -0.23
GDF3-201ENST00000329913 QRICH2Q9H0J4 1663 aa13.63□□□□□ -0.23
GDF3-201ENST00000329913 PDGFDQ9GZP0 370 aaPredicted RBP13.63□□□□□ -0.23
GDF3-201ENST00000329913 CABP1Q9NZU7 370 aa13.63□□□□□ -0.23
GDF3-201ENST00000329913 CENPJQ9HC77 1338 aaPredicted RBP13.63□□□□□ -0.23
GDF3-201ENST00000329913 CPDO75976 1380 aa13.62□□□□□ -0.23
GDF3-201ENST00000329913 LRRC37A3O60309 1634 aa13.62□□□□□ -0.23
GDF3-201ENST00000329913 ANO8Q9HCE9 1232 aaPredicted RBP13.62□□□□□ -0.23
GDF3-201ENST00000329913 NLRP6P59044 892 aa13.61□□□□□ -0.23
GDF3-201ENST00000329913 NLRP13Q86W25 1043 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms