RNA–Protein interactions for RNA: ENST00000327726.10

CFD-201, Transcript of complement factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CFD, Length 1,201 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFD-201ENST00000327726 CCDC9Q9Y3X0 531 aaKnown RBP29.94■■■□□ 2.38
CFD-201ENST00000327726 PCGF6Q9BYE7 350 aa29.93■■■□□ 2.38
CFD-201ENST00000327726 POLR3AO14802 1390 aaPredicted RBP29.92■■■□□ 2.38
CFD-201ENST00000327726 NEUROD1Q13562 356 aa29.92■■■□□ 2.38
CFD-201ENST00000327726 PLEKHG3A1L390 1219 aa29.91■■■□□ 2.38
CFD-201ENST00000327726 TOPAZ1Q8N9V7 1692 aa29.91■■■□□ 2.38
CFD-201ENST00000327726 SRPK2P78362 688 aaKnown RBP29.9■■■□□ 2.38
CFD-201ENST00000327726 CCDC125Q86Z20 511 aa29.9■■■□□ 2.38
CFD-201ENST00000327726 ACEP12821 1306 aa29.9■■■□□ 2.38
CFD-201ENST00000327726 NBPF8Q3BBV2 869 aa29.89■■■□□ 2.38
CFD-201ENST00000327726 COL14A1Q05707 1796 aaKnown RBP29.88■■■□□ 2.37
CFD-201ENST00000327726 BTG4Q9NY30 223 aa29.88■■■□□ 2.37
CFD-201ENST00000327726 SEPT12Q8IYM1 358 aa29.86■■■□□ 2.37
CFD-201ENST00000327726 ONECUT3O60422 494 aaPredicted RBP29.85■■■□□ 2.37
CFD-201ENST00000327726 CRYBG1Q9Y4K1 1723 aa29.85■■■□□ 2.37
CFD-201ENST00000327726 PRDM11Q9NQV5 511 aa29.84■■■□□ 2.37
CFD-201ENST00000327726 QRICH2Q9H0J4 1663 aa29.84■■■□□ 2.37
CFD-201ENST00000327726 TRPM1Q7Z4N2 1603 aa29.83■■■□□ 2.37
CFD-201ENST00000327726 EP400Q96L91 3159 aa29.83■■■□□ 2.37
CFD-201ENST00000327726 PPIP5K1Q6PFW1 1433 aa29.82■■■□□ 2.36
CFD-201ENST00000327726 ROCK2O75116 1388 aaKnown RBP29.82■■■□□ 2.36
CFD-201ENST00000327726 CABP2Q9NPB3 220 aa29.82■■■□□ 2.36
CFD-201ENST00000327726 NRAPQ86VF7 1730 aa29.82■■■□□ 2.36
CFD-201ENST00000327726 ABTB2Q8N961 1025 aa29.79■■■□□ 2.36
CFD-201ENST00000327726 BRD4O60885 1362 aaPredicted RBP29.78■■■□□ 2.36
CFD-201ENST00000327726 EVC2Q86UK5 1308 aa29.78■■■□□ 2.36
CFD-201ENST00000327726 A0A0G2JS52 829 aa29.78■■■□□ 2.36
CFD-201ENST00000327726 MYT1Q01538 1121 aa29.78■■■□□ 2.36
CFD-201ENST00000327726 NUTM2GQ5VZR2 741 aa29.78■■■□□ 2.36
CFD-201ENST00000327726 PHRF1Q9P1Y6 1649 aaKnown RBP29.78■■■□□ 2.36
CFD-201ENST00000327726 BRWD3Q6RI45 1802 aa29.78■■■□□ 2.36
CFD-201ENST00000327726 KIAA0232Q92628 1395 aa29.77■■■□□ 2.36
CFD-201ENST00000327726 KRT27Q7Z3Y8 459 aa29.77■■■□□ 2.36
CFD-201ENST00000327726 BLMP54132 1417 aaPredicted RBP29.75■■■□□ 2.35
CFD-201ENST00000327726 FAM98CQ17RN3 349 aaKnown RBP29.75■■■□□ 2.35
CFD-201ENST00000327726 SPATA31A5Q5VU36 1347 aa29.74■■■□□ 2.35
CFD-201ENST00000327726 SPATA31A7Q8IWB4 1347 aa29.74■■■□□ 2.35
CFD-201ENST00000327726 ZC3H6P61129 1189 aaKnown RBP29.74■■■□□ 2.35
CFD-201ENST00000327726 NLRP13Q86W25 1043 aa29.73■■■□□ 2.35
CFD-201ENST00000327726 CABP1Q9NZU7 370 aa29.73■■■□□ 2.35
CFD-201ENST00000327726 CHRNA2Q15822 529 aa29.72■■■□□ 2.35
CFD-201ENST00000327726 SF3B2Q13435 895 aaKnown RBP29.71■■■□□ 2.35
CFD-201ENST00000327726 USP19O94966 1318 aa29.71■■■□□ 2.35
CFD-201ENST00000327726 ZRANB1Q9UGI0 708 aa29.68■■■□□ 2.34
CFD-201ENST00000327726 USP6P35125 1406 aa29.68■■■□□ 2.34
CFD-201ENST00000327726 NRKQ7Z2Y5 1582 aa29.68■■■□□ 2.34
CFD-201ENST00000327726 TONSLQ96HA7 1378 aa29.67■■■□□ 2.34
CFD-201ENST00000327726 STRN4Q9NRL3 753 aa29.67■■■□□ 2.34
CFD-201ENST00000327726 CPDO75976 1380 aa29.66■■■□□ 2.34
CFD-201ENST00000327726 GCP02774 474 aa29.65■■■□□ 2.34
CFD-201ENST00000327726 EVA1CP58658 441 aa29.65■■■□□ 2.34
CFD-201ENST00000327726 SPATA31A1Q5TZJ5 1347 aa29.65■■■□□ 2.34
CFD-201ENST00000327726 ZNF692Q9BU19 519 aaPredicted RBP29.63■■■□□ 2.33
CFD-201ENST00000327726 CARD11Q9BXL7 1154 aa29.63■■■□□ 2.33
CFD-201ENST00000327726 NLRP6P59044 892 aa29.62■■■□□ 2.33
CFD-201ENST00000327726 THSD7AQ9UPZ6 1657 aa29.6■■■□□ 2.33
CFD-201ENST00000327726 SBNO2Q9Y2G9 1366 aa29.6■■■□□ 2.33
CFD-201ENST00000327726 SSH2Q76I76 1423 aa29.6■■■□□ 2.33
CFD-201ENST00000327726 CAMTA1Q9Y6Y1 1673 aa29.57■■■□□ 2.32
CFD-201ENST00000327726 DEFB132Q7Z7B7 95 aa29.57■■■□□ 2.32
CFD-201ENST00000327726 LMO7Q8WWI1 1683 aa29.56■■■□□ 2.32
CFD-201ENST00000327726 BARGINQ6ZT62 677 aa29.55■■■□□ 2.32
CFD-201ENST00000327726 USP35Q9P2H5 1018 aa29.55■■■□□ 2.32
CFD-201ENST00000327726 BAG6P46379 1132 aa29.54■■■□□ 2.32
CFD-201ENST00000327726 SLIT3O75094 1523 aa29.54■■■□□ 2.32
CFD-201ENST00000327726 TTC21BQ7Z4L5 1316 aa29.53■■■□□ 2.32
CFD-201ENST00000327726 TTC21AQ8NDW8 1320 aa29.53■■■□□ 2.32
CFD-201ENST00000327726 LARP1Q6PKG0 1096 aaKnown RBP29.53■■■□□ 2.32
CFD-201ENST00000327726 TCP11L2Q8N4U5 519 aa29.52■■■□□ 2.32
CFD-201ENST00000327726 PIK3C2AO00443 1686 aa29.51■■■□□ 2.31
CFD-201ENST00000327726 ZBTB7CA1YPR0 619 aa29.51■■■□□ 2.31
CFD-201ENST00000327726 FAM182BQ5T319 152 aa29.51■■■□□ 2.31
CFD-201ENST00000327726 THRAP3Q9Y2W1 955 aaKnown RBP29.51■■■□□ 2.31
CFD-201ENST00000327726 CPSF1Q10570 1443 aaKnown RBP29.51■■■□□ 2.31
CFD-201ENST00000327726 AKAP12Q02952 1782 aa29.51■■■□□ 2.31
CFD-201ENST00000327726 AATKQ6ZMQ8 1374 aa29.51■■■□□ 2.31
CFD-201ENST00000327726 KTN1Q86UP2 1357 aaKnown RBP29.51■■■□□ 2.31
CFD-201ENST00000327726 COL5A2P05997 1499 aaPredicted RBP29.49■■■□□ 2.31
CFD-201ENST00000327726 KCNH5Q8NCM2 988 aa29.49■■■□□ 2.31
CFD-201ENST00000327726 FAM196AQ6ZSG2 479 aa29.48■■■□□ 2.31
CFD-201ENST00000327726 RGPD1P0DJD0 1748 aa29.48■■■□□ 2.31
CFD-201ENST00000327726 CLSPNQ9HAW4 1339 aa29.47■■■□□ 2.31
CFD-201ENST00000327726 PDE3BQ13370 1112 aa29.47■■■□□ 2.31
CFD-201ENST00000327726 CRB1P82279 1406 aa29.45■■■□□ 2.31
CFD-201ENST00000327726 CCER1Q8TC90 406 aaPredicted RBP29.44■■■□□ 2.3
CFD-201ENST00000327726 TMC1Q8TDI8 760 aa29.42■■■□□ 2.3
CFD-201ENST00000327726 PUS7Q96PZ0 661 aaKnown RBP29.42■■■□□ 2.3
CFD-201ENST00000327726 SLC24A1O60721 1099 aa29.41■■■□□ 2.3
CFD-201ENST00000327726 HDGFL2Q7Z4V5 671 aaPredicted RBP29.41■■■□□ 2.3
CFD-201ENST00000327726 ARHGEF25Q86VW2 580 aa29.41■■■□□ 2.3
CFD-201ENST00000327726 MON2Q7Z3U7 1717 aa29.4■■■□□ 2.3
CFD-201ENST00000327726 SRCAPQ6ZRS2 3230 aa29.4■■■□□ 2.3
CFD-201ENST00000327726 DISP2A7MBM2 1401 aa29.39■■■□□ 2.3
CFD-201ENST00000327726 EN1Q05925 392 aaPredicted RBP29.39■■■□□ 2.3
CFD-201ENST00000327726 TOM1L2Q6ZVM7 507 aa29.39■■■□□ 2.3
CFD-201ENST00000327726 SOX12O15370 315 aa29.38■■■□□ 2.29
CFD-201ENST00000327726 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.38■■■□□ 2.29
CFD-201ENST00000327726 COL18A1P39060 1754 aa29.37■■■□□ 2.29
CFD-201ENST00000327726 C11orf95C9JLR9 678 aaPredicted RBP29.37■■■□□ 2.29
CFD-201ENST00000327726 TRIM37O94972 964 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms