RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 CCDC125Q86Z20 511 aa20.34■□□□□ 0.85
RPAIN-201ENST00000327154 CENPJQ9HC77 1338 aaPredicted RBP20.33■□□□□ 0.85
RPAIN-201ENST00000327154 SRPK2P78362 688 aaKnown RBP20.33■□□□□ 0.85
RPAIN-201ENST00000327154 NUTM2GQ5VZR2 741 aa20.33■□□□□ 0.85
RPAIN-201ENST00000327154 KIAA1210Q9ULL0 1709 aa20.33■□□□□ 0.84
RPAIN-201ENST00000327154 CABP2Q9NPB3 220 aa20.31■□□□□ 0.84
RPAIN-201ENST00000327154 PRDM11Q9NQV5 511 aa20.31■□□□□ 0.84
RPAIN-201ENST00000327154 ALS2Q96Q42 1657 aa20.31■□□□□ 0.84
RPAIN-201ENST00000327154 POLR3AO14802 1390 aaPredicted RBP20.31■□□□□ 0.84
RPAIN-201ENST00000327154 ABCA3Q99758 1704 aa20.3■□□□□ 0.84
RPAIN-201ENST00000327154 A0A0G2JS52 829 aa20.29■□□□□ 0.84
RPAIN-201ENST00000327154 MYT1Q01538 1121 aa20.29■□□□□ 0.84
RPAIN-201ENST00000327154 FAM98CQ17RN3 349 aaKnown RBP20.29■□□□□ 0.84
RPAIN-201ENST00000327154 PLCH1Q4KWH8 1693 aa20.29■□□□□ 0.84
RPAIN-201ENST00000327154 ZC3H6P61129 1189 aaKnown RBP20.28■□□□□ 0.84
RPAIN-201ENST00000327154 KRT27Q7Z3Y8 459 aa20.28■□□□□ 0.84
RPAIN-201ENST00000327154 ABTB2Q8N961 1025 aa20.28■□□□□ 0.84
RPAIN-201ENST00000327154 NWD2Q9ULI1 1742 aa20.27■□□□□ 0.84
RPAIN-201ENST00000327154 CHRNA2Q15822 529 aa20.27■□□□□ 0.84
RPAIN-201ENST00000327154 KIAA0232Q92628 1395 aa20.26■□□□□ 0.83
RPAIN-201ENST00000327154 ITSN1Q15811 1721 aa20.25■□□□□ 0.83
RPAIN-201ENST00000327154 CABP1Q9NZU7 370 aa20.25■□□□□ 0.83
RPAIN-201ENST00000327154 PPIP5K1Q6PFW1 1433 aa20.25■□□□□ 0.83
RPAIN-201ENST00000327154 SPATA31A5Q5VU36 1347 aa20.25■□□□□ 0.83
RPAIN-201ENST00000327154 SPATA31A7Q8IWB4 1347 aa20.25■□□□□ 0.83
RPAIN-201ENST00000327154 EP400Q96L91 3159 aa20.24■□□□□ 0.83
RPAIN-201ENST00000327154 COL14A1Q05707 1796 aaKnown RBP20.23■□□□□ 0.83
RPAIN-201ENST00000327154 BLMP54132 1417 aaPredicted RBP20.23■□□□□ 0.83
RPAIN-201ENST00000327154 ZRANB1Q9UGI0 708 aa20.23■□□□□ 0.83
RPAIN-201ENST00000327154 ROCK2O75116 1388 aaKnown RBP20.22■□□□□ 0.83
RPAIN-201ENST00000327154 SF3B2Q13435 895 aaKnown RBP20.22■□□□□ 0.83
RPAIN-201ENST00000327154 STRN4Q9NRL3 753 aa20.22■□□□□ 0.83
RPAIN-201ENST00000327154 DEFB132Q7Z7B7 95 aa20.21■□□□□ 0.83
RPAIN-201ENST00000327154 NLRP13Q86W25 1043 aa20.21■□□□□ 0.83
RPAIN-201ENST00000327154 EVC2Q86UK5 1308 aa20.21■□□□□ 0.83
RPAIN-201ENST00000327154 TOPAZ1Q8N9V7 1692 aa20.2■□□□□ 0.82
RPAIN-201ENST00000327154 EVA1CP58658 441 aa20.2■□□□□ 0.82
RPAIN-201ENST00000327154 BRWD3Q6RI45 1802 aa20.2■□□□□ 0.82
RPAIN-201ENST00000327154 NRAPQ86VF7 1730 aa20.19■□□□□ 0.82
RPAIN-201ENST00000327154 CRYBG1Q9Y4K1 1723 aa20.19■□□□□ 0.82
RPAIN-201ENST00000327154 GCP02774 474 aa20.18■□□□□ 0.82
RPAIN-201ENST00000327154 FAM182BQ5T319 152 aa20.18■□□□□ 0.82
RPAIN-201ENST00000327154 SPATA31A1Q5TZJ5 1347 aa20.18■□□□□ 0.82
RPAIN-201ENST00000327154 USP35Q9P2H5 1018 aa20.17■□□□□ 0.82
RPAIN-201ENST00000327154 USP19O94966 1318 aa20.17■□□□□ 0.82
RPAIN-201ENST00000327154 NLRP6P59044 892 aa20.16■□□□□ 0.82
RPAIN-201ENST00000327154 TRPM1Q7Z4N2 1603 aa20.16■□□□□ 0.82
RPAIN-201ENST00000327154 QRICH2Q9H0J4 1663 aa20.16■□□□□ 0.82
RPAIN-201ENST00000327154 BRD4O60885 1362 aaPredicted RBP20.15■□□□□ 0.82
RPAIN-201ENST00000327154 CPDO75976 1380 aa20.14■□□□□ 0.81
RPAIN-201ENST00000327154 LARP1Q6PKG0 1096 aaKnown RBP20.14■□□□□ 0.81
RPAIN-201ENST00000327154 PHRF1Q9P1Y6 1649 aaKnown RBP20.13■□□□□ 0.81
RPAIN-201ENST00000327154 USP6P35125 1406 aa20.13■□□□□ 0.81
RPAIN-201ENST00000327154 ZBTB7CA1YPR0 619 aa20.12■□□□□ 0.81
RPAIN-201ENST00000327154 ZNF692Q9BU19 519 aaPredicted RBP20.12■□□□□ 0.81
RPAIN-201ENST00000327154 CARD11Q9BXL7 1154 aa20.12■□□□□ 0.81
RPAIN-201ENST00000327154 SSH2Q76I76 1423 aa20.1■□□□□ 0.81
RPAIN-201ENST00000327154 CAMTA1Q9Y6Y1 1673 aa20.1■□□□□ 0.81
RPAIN-201ENST00000327154 BAG6P46379 1132 aa20.1■□□□□ 0.81
RPAIN-201ENST00000327154 BARGINQ6ZT62 677 aa20.1■□□□□ 0.81
RPAIN-201ENST00000327154 NRKQ7Z2Y5 1582 aa20.09■□□□□ 0.81
RPAIN-201ENST00000327154 TCP11L2Q8N4U5 519 aa20.09■□□□□ 0.81
RPAIN-201ENST00000327154 TONSLQ96HA7 1378 aa20.08■□□□□ 0.81
RPAIN-201ENST00000327154 TTC21BQ7Z4L5 1316 aa20.08■□□□□ 0.81
RPAIN-201ENST00000327154 TRIM26Q12899 539 aaPredicted RBP20.08■□□□□ 0.81
RPAIN-201ENST00000327154 PDE3BQ13370 1112 aa20.07■□□□□ 0.8
RPAIN-201ENST00000327154 THSD7AQ9UPZ6 1657 aa20.07■□□□□ 0.8
RPAIN-201ENST00000327154 EN1Q05925 392 aaPredicted RBP20.06■□□□□ 0.8
RPAIN-201ENST00000327154 FAM196AQ6ZSG2 479 aa20.06■□□□□ 0.8
RPAIN-201ENST00000327154 TRIM37O94972 964 aa20.05■□□□□ 0.8
RPAIN-201ENST00000327154 THRAP3Q9Y2W1 955 aaKnown RBP20.05■□□□□ 0.8
RPAIN-201ENST00000327154 SRCAPQ6ZRS2 3230 aa20.04■□□□□ 0.8
RPAIN-201ENST00000327154 SOX12O15370 315 aa20.04■□□□□ 0.8
RPAIN-201ENST00000327154 AATKQ6ZMQ8 1374 aa20.04■□□□□ 0.8
RPAIN-201ENST00000327154 AXIN2Q9Y2T1 843 aa20.03■□□□□ 0.8
RPAIN-201ENST00000327154 KTN1Q86UP2 1357 aaKnown RBP20.03■□□□□ 0.8
RPAIN-201ENST00000327154 COL5A2P05997 1499 aaPredicted RBP20.03■□□□□ 0.8
RPAIN-201ENST00000327154 LMO7Q8WWI1 1683 aa20.03■□□□□ 0.8
RPAIN-201ENST00000327154 TTC21AQ8NDW8 1320 aa20.02■□□□□ 0.8
RPAIN-201ENST00000327154 CPSF1Q10570 1443 aaKnown RBP20.02■□□□□ 0.8
RPAIN-201ENST00000327154 KCNH5Q8NCM2 988 aa20.02■□□□□ 0.8
RPAIN-201ENST00000327154 TMC1Q8TDI8 760 aa20.02■□□□□ 0.8
RPAIN-201ENST00000327154 SBNO2Q9Y2G9 1366 aa20.02■□□□□ 0.8
RPAIN-201ENST00000327154 SLIT3O75094 1523 aa20.02■□□□□ 0.79
RPAIN-201ENST00000327154 ARHGEF25Q86VW2 580 aa20.01■□□□□ 0.79
RPAIN-201ENST00000327154 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.01■□□□□ 0.79
RPAIN-201ENST00000327154 PSDA5PKW4 1024 aaPredicted RBP20■□□□□ 0.79
RPAIN-201ENST00000327154 TOM1L2Q6ZVM7 507 aa20■□□□□ 0.79
RPAIN-201ENST00000327154 SLC12A5Q9H2X9 1139 aa20■□□□□ 0.79
RPAIN-201ENST00000327154 CRB1P82279 1406 aa20■□□□□ 0.79
RPAIN-201ENST00000327154 APBA3O96018 575 aa19.99■□□□□ 0.79
RPAIN-201ENST00000327154 EZH2Q15910 746 aaKnown RBP19.99■□□□□ 0.79
RPAIN-201ENST00000327154 PIK3C2AO00443 1686 aa19.98■□□□□ 0.79
RPAIN-201ENST00000327154 CAMKK2Q96RR4 588 aa19.97■□□□□ 0.79
RPAIN-201ENST00000327154 HDGFL2Q7Z4V5 671 aaPredicted RBP19.96■□□□□ 0.79
RPAIN-201ENST00000327154 WDR17Q8IZU2 1322 aa19.96■□□□□ 0.79
RPAIN-201ENST00000327154 DISP2A7MBM2 1401 aa19.95■□□□□ 0.78
RPAIN-201ENST00000327154 ST20-MTHFSA0A0A6YYL1 179 aa19.95■□□□□ 0.78
RPAIN-201ENST00000327154 CSB-PGBD3P0DP91 1061 aa19.95■□□□□ 0.78
RPAIN-201ENST00000327154 NME9Q86XW9 330 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms