RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 PLEKHG3A1L390 1219 aa25.56■■□□□ 1.68
PTPMT1-201ENST00000326656 SEPT12Q8IYM1 358 aa25.56■■□□□ 1.68
PTPMT1-201ENST00000326656 COL14A1Q05707 1796 aaKnown RBP25.55■■□□□ 1.68
PTPMT1-201ENST00000326656 CCDC9Q9Y3X0 531 aaKnown RBP25.55■■□□□ 1.68
PTPMT1-201ENST00000326656 POLR3AO14802 1390 aaPredicted RBP25.55■■□□□ 1.68
PTPMT1-201ENST00000326656 NBPF8Q3BBV2 869 aa25.53■■□□□ 1.68
PTPMT1-201ENST00000326656 BTG4Q9NY30 223 aa25.53■■□□□ 1.68
PTPMT1-201ENST00000326656 L3MBTL2Q969R5 705 aa25.51■■□□□ 1.67
PTPMT1-201ENST00000326656 ACEP12821 1306 aa25.51■■□□□ 1.67
PTPMT1-201ENST00000326656 CENPJQ9HC77 1338 aaPredicted RBP25.51■■□□□ 1.67
PTPMT1-201ENST00000326656 TOPAZ1Q8N9V7 1692 aa25.51■■□□□ 1.67
PTPMT1-201ENST00000326656 CRYBG1Q9Y4K1 1723 aa25.51■■□□□ 1.67
PTPMT1-201ENST00000326656 BRWD3Q6RI45 1802 aa25.51■■□□□ 1.67
PTPMT1-201ENST00000326656 BLMP54132 1417 aaPredicted RBP25.5■■□□□ 1.67
PTPMT1-201ENST00000326656 NRAPQ86VF7 1730 aa25.49■■□□□ 1.67
PTPMT1-201ENST00000326656 KRT27Q7Z3Y8 459 aa25.48■■□□□ 1.67
PTPMT1-201ENST00000326656 PRDM11Q9NQV5 511 aa25.48■■□□□ 1.67
PTPMT1-201ENST00000326656 ZRANB1Q9UGI0 708 aa25.47■■□□□ 1.67
PTPMT1-201ENST00000326656 BRD4O60885 1362 aaPredicted RBP25.46■■□□□ 1.67
PTPMT1-201ENST00000326656 SRPK2P78362 688 aaKnown RBP25.46■■□□□ 1.67
PTPMT1-201ENST00000326656 SPATA31A5Q5VU36 1347 aa25.44■■□□□ 1.66
PTPMT1-201ENST00000326656 SPATA31A7Q8IWB4 1347 aa25.44■■□□□ 1.66
PTPMT1-201ENST00000326656 SF3B2Q13435 895 aaKnown RBP25.43■■□□□ 1.66
PTPMT1-201ENST00000326656 KIAA0232Q92628 1395 aa25.43■■□□□ 1.66
PTPMT1-201ENST00000326656 FAM98CQ17RN3 349 aaKnown RBP25.42■■□□□ 1.66
PTPMT1-201ENST00000326656 ABTB2Q8N961 1025 aa25.42■■□□□ 1.66
PTPMT1-201ENST00000326656 SIN3AQ96ST3 1273 aa25.42■■□□□ 1.66
PTPMT1-201ENST00000326656 PPIP5K1Q6PFW1 1433 aa25.41■■□□□ 1.66
PTPMT1-201ENST00000326656 PHRF1Q9P1Y6 1649 aaKnown RBP25.41■■□□□ 1.66
PTPMT1-201ENST00000326656 QRICH2Q9H0J4 1663 aa25.4■■□□□ 1.66
PTPMT1-201ENST00000326656 A0A0G2JS52 829 aa25.4■■□□□ 1.66
PTPMT1-201ENST00000326656 MYT1Q01538 1121 aa25.4■■□□□ 1.66
PTPMT1-201ENST00000326656 NLRP13Q86W25 1043 aa25.39■■□□□ 1.66
PTPMT1-201ENST00000326656 CABP2Q9NPB3 220 aa25.39■■□□□ 1.66
PTPMT1-201ENST00000326656 TRPM1Q7Z4N2 1603 aa25.38■■□□□ 1.65
PTPMT1-201ENST00000326656 EVC2Q86UK5 1308 aa25.37■■□□□ 1.65
PTPMT1-201ENST00000326656 CPDO75976 1380 aa25.37■■□□□ 1.65
PTPMT1-201ENST00000326656 ZC3H6P61129 1189 aaKnown RBP25.37■■□□□ 1.65
PTPMT1-201ENST00000326656 NEUROD1Q13562 356 aa25.37■■□□□ 1.65
PTPMT1-201ENST00000326656 NUTM2GQ5VZR2 741 aa25.37■■□□□ 1.65
PTPMT1-201ENST00000326656 USP19O94966 1318 aa25.37■■□□□ 1.65
PTPMT1-201ENST00000326656 SPATA31A1Q5TZJ5 1347 aa25.37■■□□□ 1.65
PTPMT1-201ENST00000326656 CHRNA2Q15822 529 aa25.35■■□□□ 1.65
PTPMT1-201ENST00000326656 CABP1Q9NZU7 370 aa25.35■■□□□ 1.65
PTPMT1-201ENST00000326656 ROCK2O75116 1388 aaKnown RBP25.33■■□□□ 1.65
PTPMT1-201ENST00000326656 EVA1CP58658 441 aa25.33■■□□□ 1.65
PTPMT1-201ENST00000326656 THSD7AQ9UPZ6 1657 aa25.32■■□□□ 1.64
PTPMT1-201ENST00000326656 GCP02774 474 aa25.32■■□□□ 1.64
PTPMT1-201ENST00000326656 DEFB132Q7Z7B7 95 aa25.32■■□□□ 1.64
PTPMT1-201ENST00000326656 NRKQ7Z2Y5 1582 aa25.31■■□□□ 1.64
PTPMT1-201ENST00000326656 USP6P35125 1406 aa25.31■■□□□ 1.64
PTPMT1-201ENST00000326656 STRN4Q9NRL3 753 aa25.31■■□□□ 1.64
PTPMT1-201ENST00000326656 BAG6P46379 1132 aa25.3■■□□□ 1.64
PTPMT1-201ENST00000326656 BARGINQ6ZT62 677 aa25.3■■□□□ 1.64
PTPMT1-201ENST00000326656 ZNF692Q9BU19 519 aaPredicted RBP25.3■■□□□ 1.64
PTPMT1-201ENST00000326656 CAMTA1Q9Y6Y1 1673 aa25.28■■□□□ 1.64
PTPMT1-201ENST00000326656 SSH2Q76I76 1423 aa25.28■■□□□ 1.64
PTPMT1-201ENST00000326656 NLRP6P59044 892 aa25.27■■□□□ 1.64
PTPMT1-201ENST00000326656 LMO7Q8WWI1 1683 aa25.26■■□□□ 1.63
PTPMT1-201ENST00000326656 THRAP3Q9Y2W1 955 aaKnown RBP25.26■■□□□ 1.63
PTPMT1-201ENST00000326656 FAM196AQ6ZSG2 479 aa25.25■■□□□ 1.63
PTPMT1-201ENST00000326656 RGPD1P0DJD0 1748 aa25.25■■□□□ 1.63
PTPMT1-201ENST00000326656 SBNO2Q9Y2G9 1366 aa25.24■■□□□ 1.63
PTPMT1-201ENST00000326656 TCP11L2Q8N4U5 519 aa25.23■■□□□ 1.63
PTPMT1-201ENST00000326656 LARP1Q6PKG0 1096 aaKnown RBP25.22■■□□□ 1.63
PTPMT1-201ENST00000326656 AATKQ6ZMQ8 1374 aa25.21■■□□□ 1.63
PTPMT1-201ENST00000326656 USP35Q9P2H5 1018 aa25.21■■□□□ 1.63
PTPMT1-201ENST00000326656 SLIT3O75094 1523 aa25.21■■□□□ 1.63
PTPMT1-201ENST00000326656 DISP2A7MBM2 1401 aa25.2■■□□□ 1.63
PTPMT1-201ENST00000326656 PDE3BQ13370 1112 aa25.2■■□□□ 1.62
PTPMT1-201ENST00000326656 FAM182BQ5T319 152 aa25.2■■□□□ 1.62
PTPMT1-201ENST00000326656 TTC21AQ8NDW8 1320 aa25.19■■□□□ 1.62
PTPMT1-201ENST00000326656 KCNH5Q8NCM2 988 aa25.19■■□□□ 1.62
PTPMT1-201ENST00000326656 COL5A2P05997 1499 aaPredicted RBP25.19■■□□□ 1.62
PTPMT1-201ENST00000326656 TTC21BQ7Z4L5 1316 aa25.18■■□□□ 1.62
PTPMT1-201ENST00000326656 C11orf95C9JLR9 678 aaPredicted RBP25.18■■□□□ 1.62
PTPMT1-201ENST00000326656 CARD11Q9BXL7 1154 aa25.18■■□□□ 1.62
PTPMT1-201ENST00000326656 CPSF1Q10570 1443 aaKnown RBP25.18■■□□□ 1.62
PTPMT1-201ENST00000326656 AKAP12Q02952 1782 aa25.17■■□□□ 1.62
PTPMT1-201ENST00000326656 PIK3C2AO00443 1686 aa25.17■■□□□ 1.62
PTPMT1-201ENST00000326656 CRB1P82279 1406 aa25.16■■□□□ 1.62
PTPMT1-201ENST00000326656 TONSLQ96HA7 1378 aa25.16■■□□□ 1.62
PTPMT1-201ENST00000326656 EN1Q05925 392 aaPredicted RBP25.15■■□□□ 1.62
PTPMT1-201ENST00000326656 TNS1Q9HBL0 1735 aaKnown RBP25.14■■□□□ 1.61
PTPMT1-201ENST00000326656 PUS7Q96PZ0 661 aaKnown RBP25.13■■□□□ 1.61
PTPMT1-201ENST00000326656 KTN1Q86UP2 1357 aaKnown RBP25.13■■□□□ 1.61
PTPMT1-201ENST00000326656 TRIM37O94972 964 aa25.12■■□□□ 1.61
PTPMT1-201ENST00000326656 ARHGEF25Q86VW2 580 aa25.12■■□□□ 1.61
PTPMT1-201ENST00000326656 PARD3Q8TEW0 1356 aa25.12■■□□□ 1.61
PTPMT1-201ENST00000326656 COL18A1P39060 1754 aa25.11■■□□□ 1.61
PTPMT1-201ENST00000326656 PARP4Q9UKK3 1724 aaKnown RBP25.11■■□□□ 1.61
PTPMT1-201ENST00000326656 SLC24A1O60721 1099 aa25.1■■□□□ 1.61
PTPMT1-201ENST00000326656 ZBTB7CA1YPR0 619 aa25.09■■□□□ 1.61
PTPMT1-201ENST00000326656 CAMKK2Q96RR4 588 aa25.09■■□□□ 1.61
PTPMT1-201ENST00000326656 WDR17Q8IZU2 1322 aa25.09■■□□□ 1.61
PTPMT1-201ENST00000326656 APBA3O96018 575 aa25.08■■□□□ 1.61
PTPMT1-201ENST00000326656 TRIM26Q12899 539 aaPredicted RBP25.08■■□□□ 1.61
PTPMT1-201ENST00000326656 CDCA7Q9BWT1 371 aaPredicted RBP25.08■■□□□ 1.61
PTPMT1-201ENST00000326656 MON2Q7Z3U7 1717 aa25.07■■□□□ 1.6
PTPMT1-201ENST00000326656 PSDA5PKW4 1024 aaPredicted RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms