RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 BTG4Q9NY30 223 aa11.79□□□□□ -0.52
CCNC-201ENST00000326298 ACEP12821 1306 aa11.79□□□□□ -0.52
CCNC-201ENST00000326298 SEPT12Q8IYM1 358 aa11.79□□□□□ -0.52
CCNC-201ENST00000326298 CABP2Q9NPB3 220 aa11.79□□□□□ -0.52
CCNC-201ENST00000326298 KIAA1210Q9ULL0 1709 aa11.79□□□□□ -0.52
CCNC-201ENST00000326298 NRAPQ86VF7 1730 aa11.78□□□□□ -0.52
CCNC-201ENST00000326298 TOPAZ1Q8N9V7 1692 aa11.78□□□□□ -0.52
CCNC-201ENST00000326298 CHRNA2Q15822 529 aa11.78□□□□□ -0.52
CCNC-201ENST00000326298 NBPF8Q3BBV2 869 aa11.78□□□□□ -0.52
CCNC-201ENST00000326298 FAM182BQ5T319 152 aa11.78□□□□□ -0.52
CCNC-201ENST00000326298 CCDC9Q9Y3X0 531 aaKnown RBP11.78□□□□□ -0.52
CCNC-201ENST00000326298 NWD2Q9ULI1 1742 aa11.77□□□□□ -0.53
CCNC-201ENST00000326298 ONECUT3O60422 494 aaPredicted RBP11.76□□□□□ -0.53
CCNC-201ENST00000326298 POLR3AO14802 1390 aaPredicted RBP11.76□□□□□ -0.53
CCNC-201ENST00000326298 EIF3AQ14152 1382 aaKnown RBP11.76□□□□□ -0.53
CCNC-201ENST00000326298 ZC3H6P61129 1189 aaKnown RBP11.76□□□□□ -0.53
CCNC-201ENST00000326298 FAM98CQ17RN3 349 aaKnown RBP11.76□□□□□ -0.53
CCNC-201ENST00000326298 DEFB132Q7Z7B7 95 aa11.76□□□□□ -0.53
CCNC-201ENST00000326298 CCDC61Q9Y6R9 512 aa11.76□□□□□ -0.53
CCNC-201ENST00000326298 CENPJQ9HC77 1338 aaPredicted RBP11.76□□□□□ -0.53
CCNC-201ENST00000326298 KIAA0232Q92628 1395 aa11.75□□□□□ -0.53
CCNC-201ENST00000326298 ITSN1Q15811 1721 aa11.75□□□□□ -0.53
CCNC-201ENST00000326298 PLEKHG3A1L390 1219 aa11.75□□□□□ -0.53
CCNC-201ENST00000326298 SRPK2P78362 688 aaKnown RBP11.74□□□□□ -0.53
CCNC-201ENST00000326298 PRDM11Q9NQV5 511 aa11.74□□□□□ -0.53
CCNC-201ENST00000326298 COL14A1Q05707 1796 aaKnown RBP11.74□□□□□ -0.53
CCNC-201ENST00000326298 TRPM1Q7Z4N2 1603 aa11.73□□□□□ -0.53
CCNC-201ENST00000326298 PHRF1Q9P1Y6 1649 aaKnown RBP11.73□□□□□ -0.53
CCNC-201ENST00000326298 QRICH2Q9H0J4 1663 aa11.73□□□□□ -0.53
CCNC-201ENST00000326298 PPIP5K1Q6PFW1 1433 aa11.73□□□□□ -0.53
CCNC-201ENST00000326298 CABP1Q9NZU7 370 aa11.73□□□□□ -0.53
CCNC-201ENST00000326298 SPATA31A5Q5VU36 1347 aa11.72□□□□□ -0.53
CCNC-201ENST00000326298 SPATA31A7Q8IWB4 1347 aa11.72□□□□□ -0.53
CCNC-201ENST00000326298 KRT27Q7Z3Y8 459 aa11.72□□□□□ -0.53
CCNC-201ENST00000326298 A0A0G2JS52 829 aa11.71□□□□□ -0.53
CCNC-201ENST00000326298 MYT1Q01538 1121 aa11.71□□□□□ -0.53
CCNC-201ENST00000326298 ABTB2Q8N961 1025 aa11.71□□□□□ -0.53
CCNC-201ENST00000326298 STRN4Q9NRL3 753 aa11.71□□□□□ -0.53
CCNC-201ENST00000326298 NRKQ7Z2Y5 1582 aa11.7□□□□□ -0.54
CCNC-201ENST00000326298 CAMTA1Q9Y6Y1 1673 aa11.7□□□□□ -0.54
CCNC-201ENST00000326298 USP35Q9P2H5 1018 aa11.7□□□□□ -0.54
CCNC-201ENST00000326298 BLMP54132 1417 aaPredicted RBP11.7□□□□□ -0.54
CCNC-201ENST00000326298 ROCK2O75116 1388 aaKnown RBP11.69□□□□□ -0.54
CCNC-201ENST00000326298 USP19O94966 1318 aa11.69□□□□□ -0.54
CCNC-201ENST00000326298 SPATA31A1Q5TZJ5 1347 aa11.69□□□□□ -0.54
CCNC-201ENST00000326298 LARP1Q6PKG0 1096 aaKnown RBP11.68□□□□□ -0.54
CCNC-201ENST00000326298 THSD7AQ9UPZ6 1657 aa11.68□□□□□ -0.54
CCNC-201ENST00000326298 SSH2Q76I76 1423 aa11.68□□□□□ -0.54
CCNC-201ENST00000326298 GCP02774 474 aa11.68□□□□□ -0.54
CCNC-201ENST00000326298 USP6P35125 1406 aa11.67□□□□□ -0.54
CCNC-201ENST00000326298 CCDC125Q86Z20 511 aa11.67□□□□□ -0.54
CCNC-201ENST00000326298 LMO7Q8WWI1 1683 aa11.67□□□□□ -0.54
CCNC-201ENST00000326298 ZRANB1Q9UGI0 708 aa11.66□□□□□ -0.54
CCNC-201ENST00000326298 PIK3C2AO00443 1686 aa11.66□□□□□ -0.54
CCNC-201ENST00000326298 ZBTB7CA1YPR0 619 aa11.65□□□□□ -0.54
CCNC-201ENST00000326298 NLRP6P59044 892 aa11.65□□□□□ -0.54
CCNC-201ENST00000326298 AXIN2Q9Y2T1 843 aa11.65□□□□□ -0.54
CCNC-201ENST00000326298 CPDO75976 1380 aa11.65□□□□□ -0.54
CCNC-201ENST00000326298 EVC2Q86UK5 1308 aa11.65□□□□□ -0.55
CCNC-201ENST00000326298 EN1Q05925 392 aaPredicted RBP11.64□□□□□ -0.55
CCNC-201ENST00000326298 NLRP13Q86W25 1043 aa11.64□□□□□ -0.55
CCNC-201ENST00000326298 SOX12O15370 315 aa11.63□□□□□ -0.55
CCNC-201ENST00000326298 PSDA5PKW4 1024 aaPredicted RBP11.63□□□□□ -0.55
CCNC-201ENST00000326298 EVA1CP58658 441 aa11.63□□□□□ -0.55
CCNC-201ENST00000326298 COL5A2P05997 1499 aaPredicted RBP11.63□□□□□ -0.55
CCNC-201ENST00000326298 TTC21BQ7Z4L5 1316 aa11.62□□□□□ -0.55
CCNC-201ENST00000326298 SLIT3O75094 1523 aa11.62□□□□□ -0.55
CCNC-201ENST00000326298 CARD11Q9BXL7 1154 aa11.62□□□□□ -0.55
CCNC-201ENST00000326298 CPSF1Q10570 1443 aaKnown RBP11.62□□□□□ -0.55
CCNC-201ENST00000326298 CD163L1Q9NR16 1453 aa11.62□□□□□ -0.55
CCNC-201ENST00000326298 TRIM37O94972 964 aa11.62□□□□□ -0.55
CCNC-201ENST00000326298 COL18A1P39060 1754 aa11.61□□□□□ -0.55
CCNC-201ENST00000326298 TNS1Q9HBL0 1735 aaKnown RBP11.61□□□□□ -0.55
CCNC-201ENST00000326298 SF3B2Q13435 895 aaKnown RBP11.6□□□□□ -0.55
CCNC-201ENST00000326298 EZH2Q15910 746 aaKnown RBP11.6□□□□□ -0.55
CCNC-201ENST00000326298 AKAP12Q02952 1782 aa11.6□□□□□ -0.55
CCNC-201ENST00000326298 BARGINQ6ZT62 677 aa11.6□□□□□ -0.55
CCNC-201ENST00000326298 PTF1AQ7RTS3 328 aa11.6□□□□□ -0.55
CCNC-201ENST00000326298 TCP11L2Q8N4U5 519 aa11.6□□□□□ -0.55
CCNC-201ENST00000326298 SLC12A5Q9H2X9 1139 aa11.6□□□□□ -0.55
CCNC-201ENST00000326298 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.59□□□□□ -0.55
CCNC-201ENST00000326298 TONSLQ96HA7 1378 aa11.59□□□□□ -0.55
CCNC-201ENST00000326298 RGPD5Q99666 1765 aa11.59□□□□□ -0.55
CCNC-201ENST00000326298 ARHGEF25Q86VW2 580 aa11.59□□□□□ -0.55
CCNC-201ENST00000326298 AATKQ6ZMQ8 1374 aa11.58□□□□□ -0.56
CCNC-201ENST00000326298 KTN1Q86UP2 1357 aaKnown RBP11.58□□□□□ -0.56
CCNC-201ENST00000326298 BAG6P46379 1132 aa11.58□□□□□ -0.56
CCNC-201ENST00000326298 NME9Q86XW9 330 aa11.58□□□□□ -0.56
CCNC-201ENST00000326298 TRIM26Q12899 539 aaPredicted RBP11.58□□□□□ -0.56
CCNC-201ENST00000326298 CAMKK2Q96RR4 588 aa11.58□□□□□ -0.56
CCNC-201ENST00000326298 TESK2Q96S53 571 aa11.58□□□□□ -0.56
CCNC-201ENST00000326298 BRD4O60885 1362 aaPredicted RBP11.57□□□□□ -0.56
CCNC-201ENST00000326298 SBNO2Q9Y2G9 1366 aa11.57□□□□□ -0.56
CCNC-201ENST00000326298 CRB1P82279 1406 aa11.57□□□□□ -0.56
CCNC-201ENST00000326298 RGPD1P0DJD0 1748 aa11.57□□□□□ -0.56
CCNC-201ENST00000326298 NFAT5O94916 1531 aa11.57□□□□□ -0.56
CCNC-201ENST00000326298 FAM196AQ6ZSG2 479 aa11.56□□□□□ -0.56
CCNC-201ENST00000326298 TMC1Q8TDI8 760 aa11.56□□□□□ -0.56
CCNC-201ENST00000326298 ZNF692Q9BU19 519 aaPredicted RBP11.56□□□□□ -0.56
CCNC-201ENST00000326298 MON2Q7Z3U7 1717 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms