RNA–Protein interactions for RNA: ENST00000323456.9

MTMR4-201, Transcript of myotubularin related protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTMR4, Length 5,839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR4-201ENST00000323456 RUFY2Q8WXA3 655 aa12.56□□□□□ -0.4
MTMR4-201ENST00000323456 RAPGEF4Q8WZA2 1011 aa12.56□□□□□ -0.4
MTMR4-201ENST00000323456 NINLQ9Y2I6 1382 aa12.56□□□□□ -0.4
MTMR4-201ENST00000323456 ATF7IPQ6VMQ6 1270 aa12.56□□□□□ -0.4
MTMR4-201ENST00000323456 DUOX2Q9NRD8 1548 aa12.56□□□□□ -0.4
MTMR4-201ENST00000323456 DCTN1Q14203 1278 aa12.55□□□□□ -0.4
MTMR4-201ENST00000323456 XPCQ01831 940 aaPredicted RBP12.55□□□□□ -0.4
MTMR4-201ENST00000323456 TMEM57Q8N5G2 664 aa12.55□□□□□ -0.4
MTMR4-201ENST00000323456 CLSTN1O94985 981 aa12.55□□□□□ -0.4
MTMR4-201ENST00000323456 GTF2E1P29083 439 aaPredicted RBP12.55□□□□□ -0.4
MTMR4-201ENST00000323456 TPM4P67936 248 aa12.54□□□□□ -0.4
MTMR4-201ENST00000323456 NUDT16Q96DE0 195 aaKnown RBP12.54□□□□□ -0.4
MTMR4-201ENST00000323456 ABCA5Q8WWZ7 1642 aa12.54□□□□□ -0.4
MTMR4-201ENST00000323456 SF3A1Q15459 793 aaKnown RBP12.54□□□□□ -0.4
MTMR4-201ENST00000323456 KDM5BQ9UGL1 1544 aa12.54□□□□□ -0.4
MTMR4-201ENST00000323456 NME9Q86XW9 330 aa12.54□□□□□ -0.4
MTMR4-201ENST00000323456 FBXW7Q969H0 707 aa12.53□□□□□ -0.4
MTMR4-201ENST00000323456 ZKSCAN1P17029 563 aaPredicted RBP12.53□□□□□ -0.4
MTMR4-201ENST00000323456 MCM10Q7L590 875 aa12.53□□□□□ -0.4
MTMR4-201ENST00000323456 GCC1Q96CN9 775 aa12.53□□□□□ -0.4
MTMR4-201ENST00000323456 VPS37CA5D8V6 355 aaPredicted RBP12.53□□□□□ -0.4
MTMR4-201ENST00000323456 NEUROD6Q96NK8 337 aa12.53□□□□□ -0.4
MTMR4-201ENST00000323456 PRAG1Q86YV5 1406 aa12.53□□□□□ -0.4
MTMR4-201ENST00000323456 SURF6O75683 361 aaKnown RBP12.52□□□□□ -0.4
MTMR4-201ENST00000323456 CHD1LQ86WJ1 897 aa12.52□□□□□ -0.4
MTMR4-201ENST00000323456 KDM4AO75164 1064 aa12.52□□□□□ -0.4
MTMR4-201ENST00000323456 GNAI2P04899 355 aa12.52□□□□□ -0.41
MTMR4-201ENST00000323456 APPP05067 770 aa12.52□□□□□ -0.41
MTMR4-201ENST00000323456 ZNF692Q9BU19 519 aaPredicted RBP12.52□□□□□ -0.41
MTMR4-201ENST00000323456 ERC2O15083 957 aa12.51□□□□□ -0.41
MTMR4-201ENST00000323456 EMILIN1Q9Y6C2 1016 aa12.51□□□□□ -0.41
MTMR4-201ENST00000323456 NFE2L2Q16236 605 aa12.51□□□□□ -0.41
MTMR4-201ENST00000323456 CCDC27Q2M243 656 aa12.51□□□□□ -0.41
MTMR4-201ENST00000323456 SMC3Q9UQE7 1217 aa12.51□□□□□ -0.41
MTMR4-201ENST00000323456 CNTROBQ8N137 903 aa12.51□□□□□ -0.41
MTMR4-201ENST00000323456 RASSF8Q8NHQ8 419 aa12.51□□□□□ -0.41
MTMR4-201ENST00000323456 DNAJC2Q99543 621 aaKnown RBP12.51□□□□□ -0.41
MTMR4-201ENST00000323456 RARSP54136 660 aaKnown RBP12.51□□□□□ -0.41
MTMR4-201ENST00000323456 SAMD9Q5K651 1589 aa12.5□□□□□ -0.41
MTMR4-201ENST00000323456 DUSP27Q5VZP5 1158 aa12.5□□□□□ -0.41
MTMR4-201ENST00000323456 PLCH2O75038 1416 aa12.5□□□□□ -0.41
MTMR4-201ENST00000323456 TRAPPC8Q9Y2L5 1435 aa12.5□□□□□ -0.41
MTMR4-201ENST00000323456 FCHSD2O94868 740 aa12.5□□□□□ -0.41
MTMR4-201ENST00000323456 PLEKHO1Q53GL0 409 aaPredicted RBP12.5□□□□□ -0.41
MTMR4-201ENST00000323456 FBLN1P23142 703 aa12.5□□□□□ -0.41
MTMR4-201ENST00000323456 USHBP1Q8N6Y0 703 aa12.5□□□□□ -0.41
MTMR4-201ENST00000323456 MAGI3Q5TCQ9 1506 aa12.49□□□□□ -0.41
MTMR4-201ENST00000323456 DISP1Q96F81 1524 aa12.49□□□□□ -0.41
MTMR4-201ENST00000323456 PZPP20742 1482 aa12.49□□□□□ -0.41
MTMR4-201ENST00000323456 EIF2AK4Q9P2K8 1649 aaKnown RBP12.49□□□□□ -0.41
MTMR4-201ENST00000323456 SIL1Q9H173 461 aa12.49□□□□□ -0.41
MTMR4-201ENST00000323456 ATP6V1DQ9Y5K8 247 aa12.49□□□□□ -0.41
MTMR4-201ENST00000323456 MYL6BP14649 208 aa12.49□□□□□ -0.41
MTMR4-201ENST00000323456 HDGFL1Q5TGJ6 251 aa12.49□□□□□ -0.41
MTMR4-201ENST00000323456 HSP90AB4PQ58FF6 505 aa12.49□□□□□ -0.41
MTMR4-201ENST00000323456 PROSER2Q86WR7 435 aaPredicted RBP12.49□□□□□ -0.41
MTMR4-201ENST00000323456 FSD1Q9BTV5 496 aa12.49□□□□□ -0.41
MTMR4-201ENST00000323456 BRPF3Q9ULD4 1205 aa12.49□□□□□ -0.41
MTMR4-201ENST00000323456 G3V3G9 751 aa12.49□□□□□ -0.41
MTMR4-201ENST00000323456 SMARCA5O60264 1052 aaPredicted RBP12.49□□□□□ -0.41
MTMR4-201ENST00000323456 IDI1Q13907 227 aa12.49□□□□□ -0.41
MTMR4-201ENST00000323456 DCAF8Q5TAQ9 597 aa12.49□□□□□ -0.41
MTMR4-201ENST00000323456 DHX29Q7Z478 1369 aaKnown RBP12.48□□□□□ -0.41
MTMR4-201ENST00000323456 ASXL1Q8IXJ9 1541 aa12.48□□□□□ -0.41
MTMR4-201ENST00000323456 GNAI3P08754 354 aa12.48□□□□□ -0.41
MTMR4-201ENST00000323456 NUCB2P80303 420 aa12.48□□□□□ -0.41
MTMR4-201ENST00000323456 TRAK2O60296 914 aa12.48□□□□□ -0.41
MTMR4-201ENST00000323456 CT47B1P0C2W7 299 aaPredicted RBP12.48□□□□□ -0.41
MTMR4-201ENST00000323456 RBM33Q96EV2 1170 aaKnown RBP12.48□□□□□ -0.41
MTMR4-201ENST00000323456 ADGBQ8N7X0 1667 aa12.48□□□□□ -0.41
MTMR4-201ENST00000323456 SSH1Q8WYL5 1049 aa12.48□□□□□ -0.41
MTMR4-201ENST00000323456 STRN4Q9NRL3 753 aa12.48□□□□□ -0.41
MTMR4-201ENST00000323456 GCC2Q8IWJ2 1684 aa12.47□□□□□ -0.41
MTMR4-201ENST00000323456 RNF20Q5VTR2 975 aa12.47□□□□□ -0.41
MTMR4-201ENST00000323456 THEMISQ8N1K5 641 aaPredicted RBP12.47□□□□□ -0.41
MTMR4-201ENST00000323456 TMX4Q9H1E5 349 aaPredicted RBP12.47□□□□□ -0.41
MTMR4-201ENST00000323456 KIF3AQ9Y496 699 aa12.47□□□□□ -0.41
MTMR4-201ENST00000323456 FAM177BA6PVY3 158 aa12.47□□□□□ -0.41
MTMR4-201ENST00000323456 LRRCC1Q9C099 1032 aa12.47□□□□□ -0.41
MTMR4-201ENST00000323456 ASXL2Q76L83 1435 aa12.47□□□□□ -0.41
MTMR4-201ENST00000323456 DENND4BO75064 1496 aaPredicted RBP12.47□□□□□ -0.41
MTMR4-201ENST00000323456 BICD2Q8TD16 824 aa12.47□□□□□ -0.41
MTMR4-201ENST00000323456 NEK4P51957 841 aa12.47□□□□□ -0.41
MTMR4-201ENST00000323456 CEP170Q5SW79 1584 aa12.47□□□□□ -0.41
MTMR4-201ENST00000323456 ZNF530Q6P9A1 599 aaPredicted RBP12.47□□□□□ -0.41
MTMR4-201ENST00000323456 CCT4P50991 539 aaKnown RBP12.46□□□□□ -0.41
MTMR4-201ENST00000323456 LRPPRCP42704 1394 aaKnown RBP12.46□□□□□ -0.41
MTMR4-201ENST00000323456 WASHC4Q2M389 1173 aa12.46□□□□□ -0.41
MTMR4-201ENST00000323456 C14orf93Q9H972 538 aaKnown RBP12.46□□□□□ -0.41
MTMR4-201ENST00000323456 CAVIN1Q6NZI2 390 aaKnown RBP12.46□□□□□ -0.41
MTMR4-201ENST00000323456 BTBD11A6QL63 1104 aa12.46□□□□□ -0.42
MTMR4-201ENST00000323456 NFXL1Q6ZNB6 911 aa12.46□□□□□ -0.42
MTMR4-201ENST00000323456 FYB1O15117 783 aa12.45□□□□□ -0.42
MTMR4-201ENST00000323456 GOLGA6L19H0YKK7 550 aa12.45□□□□□ -0.42
MTMR4-201ENST00000323456 PRPF40AO75400 957 aaKnown RBP12.45□□□□□ -0.42
MTMR4-201ENST00000323456 IGHDP01880 384 aa12.45□□□□□ -0.42
MTMR4-201ENST00000323456 CEBPAP49715 358 aaPredicted RBP12.45□□□□□ -0.42
MTMR4-201ENST00000323456 KDM6BO15054 1643 aa12.45□□□□□ -0.42
MTMR4-201ENST00000323456 WDR7Q9Y4E6 1490 aa12.45□□□□□ -0.42
MTMR4-201ENST00000323456 RBM42Q9BTD8 480 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms