RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 HSPA6P17066 643 aa4.9□□□□□ -1.62
HIF1A-201ENST00000323441 UBTFP17480 764 aaKnown RBP4.89□□□□□ -1.63
HIF1A-201ENST00000323441 NAIPQ13075 1403 aa4.89□□□□□ -1.63
HIF1A-201ENST00000323441 FAM196AQ6ZSG2 479 aa4.89□□□□□ -1.63
HIF1A-201ENST00000323441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.89□□□□□ -1.638e-7■■□□□ 13.8
HIF1A-201ENST00000323441 SYT17Q9BSW7 474 aa4.89□□□□□ -1.63
HIF1A-201ENST00000323441 ANKRD30AQ9BXX3 1397 aa4.88□□□□□ -1.63
HIF1A-201ENST00000323441 ARHGEF10O15013 1369 aa4.88□□□□□ -1.63
HIF1A-201ENST00000323441 FAM83GA6ND36 823 aa4.88□□□□□ -1.63
HIF1A-201ENST00000323441 PLSCR1O15162 318 aa4.88□□□□□ -1.63
HIF1A-201ENST00000323441 JMYQ8N9B5 988 aa4.88□□□□□ -1.63
HIF1A-201ENST00000323441 SPATA31A1Q5TZJ5 1347 aa4.87□□□□□ -1.63
HIF1A-201ENST00000323441 TULP4Q9NRJ4 1543 aa4.87□□□□□ -1.63
HIF1A-201ENST00000323441 NBPF8Q3BBV2 869 aa4.87□□□□□ -1.63
HIF1A-201ENST00000323441 NBPF14Q5TI25 921 aa4.87□□□□□ -1.63
HIF1A-201ENST00000323441 KIAA1551Q9HCM1 1747 aa4.87□□□□□ -1.63
HIF1A-201ENST00000323441 BARGINQ6ZT62 677 aa4.87□□□□□ -1.63
HIF1A-201ENST00000323441 COL18A1P39060 1754 aa4.87□□□□□ -1.63
HIF1A-201ENST00000323441 VPS8Q8N3P4 1428 aa4.86□□□□□ -1.63
HIF1A-201ENST00000323441 ANKRD50Q9ULJ7 1429 aa4.86□□□□□ -1.63
HIF1A-201ENST00000323441 ITSN1Q15811 1721 aa4.86□□□□□ -1.63
HIF1A-201ENST00000323441 C11orf95C9JLR9 678 aaPredicted RBP4.86□□□□□ -1.63
HIF1A-201ENST00000323441 FAM98CQ17RN3 349 aaKnown RBP4.86□□□□□ -1.63
HIF1A-201ENST00000323441 FHDC1Q9C0D6 1143 aaPredicted RBP4.86□□□□□ -1.63
HIF1A-201ENST00000323441 ANO8Q9HCE9 1232 aaPredicted RBP4.86□□□□□ -1.63
HIF1A-201ENST00000323441 PPP1R1BQ9UD71 204 aaPredicted RBP4.86□□□□□ -1.63
HIF1A-201ENST00000323441 ANKARQ7Z5J8 1434 aa4.86□□□□□ -1.63
HIF1A-201ENST00000323441 ATP10DQ9P241 1426 aa4.86□□□□□ -1.63
HIF1A-201ENST00000323441 BCANQ96GW7 911 aa4.85□□□□□ -1.63
HIF1A-201ENST00000323441 LY75O60449 1722 aa4.85□□□□□ -1.63
HIF1A-201ENST00000323441 KIF13BQ9NQT8 1826 aa4.85□□□□□ -1.63
HIF1A-201ENST00000323441 PIK3C2AO00443 1686 aa4.85□□□□□ -1.63
HIF1A-201ENST00000323441 TRIM37O94972 964 aa4.85□□□□□ -1.63
HIF1A-201ENST00000323441 RRP7BPQ9NSQ0 103 aa4.85□□□□□ -1.63
HIF1A-201ENST00000323441 USP54Q70EL1 1684 aa4.85□□□□□ -1.63
HIF1A-201ENST00000323441 DHX57Q6P158 1386 aaKnown RBP4.84□□□□□ -1.63
HIF1A-201ENST00000323441 APBA3O96018 575 aa4.84□□□□□ -1.63
HIF1A-201ENST00000323441 COL13A1Q5TAT6 717 aaPredicted RBP4.84□□□□□ -1.63
HIF1A-201ENST00000323441 PROM2Q8N271 834 aa4.84□□□□□ -1.64
HIF1A-201ENST00000323441 SIRT1Q96EB6 747 aa4.84□□□□□ -1.64
HIF1A-201ENST00000323441 PDGFDQ9GZP0 370 aaPredicted RBP4.84□□□□□ -1.64
HIF1A-201ENST00000323441 ABCC11Q96J66 1382 aa4.83□□□□□ -1.64
HIF1A-201ENST00000323441 C10orf71Q711Q0 1435 aa4.83□□□□□ -1.64
HIF1A-201ENST00000323441 MTFR1LQ9H019 292 aa4.83□□□□□ -1.64
HIF1A-201ENST00000323441 PKD1L3Q7Z443 1732 aa4.83□□□□□ -1.64
HIF1A-201ENST00000323441 ROCK1Q13464 1354 aa4.83□□□□□ -1.64
HIF1A-201ENST00000323441 BTAF1O14981 1849 aa4.83□□□□□ -1.64
HIF1A-201ENST00000323441 SSH2Q76I76 1423 aa4.83□□□□□ -1.64
HIF1A-201ENST00000323441 APLP1P51693 650 aa4.83□□□□□ -1.64
HIF1A-201ENST00000323441 FAM182BQ5T319 152 aa4.83□□□□□ -1.64
HIF1A-201ENST00000323441 OVOS2A0A0G2JMS6 1433 aa4.83□□□□□ -1.64
HIF1A-201ENST00000323441 OVOS2A0A0J9YW53 1432 aa4.83□□□□□ -1.64
HIF1A-201ENST00000323441 TNS2Q63HR2 1409 aa4.83□□□□□ -1.64
HIF1A-201ENST00000323441 OVOS2Q6IE36 1432 aa4.83□□□□□ -1.64
HIF1A-201ENST00000323441 FOXO3O43524 673 aa4.83□□□□□ -1.64
HIF1A-201ENST00000323441 ESCO1Q5FWF5 840 aa4.82□□□□□ -1.64
HIF1A-201ENST00000323441 TNRC6CQ9HCJ0 1690 aaKnown RBP4.82□□□□□ -1.64
HIF1A-201ENST00000323441 BRCA1P38398 1863 aaKnown RBP4.82□□□□□ -1.64
HIF1A-201ENST00000323441 KRT28Q7Z3Y7 464 aa4.82□□□□□ -1.64
HIF1A-201ENST00000323441 BTG4Q9NY30 223 aa4.81□□□□□ -1.64
HIF1A-201ENST00000323441 KIF3CO14782 793 aa4.81□□□□□ -1.64
HIF1A-201ENST00000323441 THRAP3Q9Y2W1 955 aaKnown RBP4.81□□□□□ -1.64
HIF1A-201ENST00000323441 ABCC6O95255 1503 aa4.81□□□□□ -1.64
HIF1A-201ENST00000323441 VIRMAQ69YN4 1812 aaKnown RBP4.81□□□□□ -1.64
HIF1A-201ENST00000323441 BRD4O60885 1362 aaPredicted RBP4.81□□□□□ -1.64
HIF1A-201ENST00000323441 CPDO75976 1380 aa4.81□□□□□ -1.64
HIF1A-201ENST00000323441 RPGRIP1LQ68CZ1 1315 aa4.8□□□□□ -1.64
HIF1A-201ENST00000323441 PSME1Q06323 249 aa4.8□□□□□ -1.64
HIF1A-201ENST00000323441 PXDNLA1KZ92 1463 aa4.8□□□□□ -1.64
HIF1A-201ENST00000323441 COL5A2P05997 1499 aaPredicted RBP4.8□□□□□ -1.64
HIF1A-201ENST00000323441 XPCQ01831 940 aaPredicted RBP4.8□□□□□ -1.64
HIF1A-201ENST00000323441 ARXQ96QS3 562 aa4.8□□□□□ -1.64
HIF1A-201ENST00000323441 PIK3C2GO75747 1445 aa4.8□□□□□ -1.64
HIF1A-201ENST00000323441 PLEKHH1Q9ULM0 1364 aa4.8□□□□□ -1.64
HIF1A-201ENST00000323441 SLIT3O75094 1523 aa4.79□□□□□ -1.64
HIF1A-201ENST00000323441 SLC15A2Q16348 729 aa4.79□□□□□ -1.64
HIF1A-201ENST00000323441 CABLES1Q8TDN4 633 aa4.79□□□□□ -1.64
HIF1A-201ENST00000323441 BCL11BQ9C0K0 894 aaPredicted RBP4.79□□□□□ -1.64
HIF1A-201ENST00000323441 YBX3P16989 372 aaKnown RBP eCLIP4.79□□□□□ -1.64
HIF1A-201ENST00000323441 KLRG1Q96E93 195 aa4.79□□□□□ -1.64
HIF1A-201ENST00000323441 ARFGEF1Q9Y6D6 1849 aa4.79□□□□□ -1.64
HIF1A-201ENST00000323441 TOGARAM1Q9Y4F4 1720 aa4.78□□□□□ -1.64
HIF1A-201ENST00000323441 TAF1LQ8IZX4 1826 aa4.78□□□□□ -1.64
HIF1A-201ENST00000323441 ZBTB7AO95365 584 aa4.78□□□□□ -1.64
HIF1A-201ENST00000323441 NCBP3Q53F19 620 aaKnown RBP4.78□□□□□ -1.64
HIF1A-201ENST00000323441 KIAA0232Q92628 1395 aa4.78□□□□□ -1.64
HIF1A-201ENST00000323441 THSD7BQ9C0I4 1608 aa4.78□□□□□ -1.64
HIF1A-201ENST00000323441 KANK4Q5T7N3 995 aaPredicted RBP4.78□□□□□ -1.64
HIF1A-201ENST00000323441 GRIN3BO60391 1043 aa4.78□□□□□ -1.64
HIF1A-201ENST00000323441 TNS4Q8IZW8 715 aa4.78□□□□□ -1.64
HIF1A-201ENST00000323441 PHF8Q9UPP1 1060 aa4.78□□□□□ -1.64
HIF1A-201ENST00000323441 RGPD5Q99666 1765 aa4.78□□□□□ -1.65
HIF1A-201ENST00000323441 ADGRB1O14514 1584 aa4.77□□□□□ -1.65
HIF1A-201ENST00000323441 RGS19P49795 217 aa4.77□□□□□ -1.65
HIF1A-201ENST00000323441 YTHDC2Q9H6S0 1430 aaKnown RBP4.77□□□□□ -1.65
HIF1A-201ENST00000323441 CRB1P82279 1406 aa4.77□□□□□ -1.65
HIF1A-201ENST00000323441 SLC16A10Q8TF71 515 aa4.76□□□□□ -1.65
HIF1A-201ENST00000323441 CNKSR2Q8WXI2 1034 aa4.76□□□□□ -1.65
HIF1A-201ENST00000323441 CCDC9Q9Y3X0 531 aaKnown RBP4.76□□□□□ -1.65
HIF1A-201ENST00000323441 C5P01031 1676 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms