RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 NUCB1Q02818 461 aa9.73□□□□□ -0.85
CD46-201ENST00000322875 HSP90AB1P08238 724 aaKnown RBP9.73□□□□□ -0.85
CD46-201ENST00000322875 ZSCAN20P17040 1043 aaPredicted RBP9.73□□□□□ -0.85
CD46-201ENST00000322875 DZIP1LQ8IYY4 767 aaKnown RBP9.73□□□□□ -0.85
CD46-201ENST00000322875 INO80Q9ULG1 1556 aaPredicted RBP9.73□□□□□ -0.85
CD46-201ENST00000322875 PTPRTO14522 1441 aa9.73□□□□□ -0.85
CD46-201ENST00000322875 NOS1P29475 1434 aa9.73□□□□□ -0.85
CD46-201ENST00000322875 ZKSCAN2Q63HK3 967 aa9.73□□□□□ -0.85
CD46-201ENST00000322875 TCP11L2Q8N4U5 519 aa9.73□□□□□ -0.85
CD46-201ENST00000322875 RBSNQ9H1K0 784 aa9.73□□□□□ -0.85
CD46-201ENST00000322875 PLEKHD1A6NEE1 506 aa9.72□□□□□ -0.85
CD46-201ENST00000322875 CSPP1Q1MSJ5 1256 aa9.72□□□□□ -0.85
CD46-201ENST00000322875 GAS2L2Q8NHY3 880 aa9.72□□□□□ -0.85
CD46-201ENST00000322875 ZSCAN23Q3MJ62 389 aa9.72□□□□□ -0.85
CD46-201ENST00000322875 BMP2KLQ5H9B9 411 aa9.72□□□□□ -0.85
CD46-201ENST00000322875 CCDC94Q9BW85 323 aaPredicted RBP9.72□□□□□ -0.85
CD46-201ENST00000322875 BCL2L13Q9BXK5 485 aa9.72□□□□□ -0.85
CD46-201ENST00000322875 LMBRD1Q9NUN5 540 aa9.72□□□□□ -0.85
CD46-201ENST00000322875 ABCA6Q8N139 1617 aa9.72□□□□□ -0.85
CD46-201ENST00000322875 ZC3H13Q5T200 1668 aaKnown RBP9.71□□□□□ -0.85
CD46-201ENST00000322875 XPCQ01831 940 aaPredicted RBP9.71□□□□□ -0.85
CD46-201ENST00000322875 SASS6Q6UVJ0 657 aa9.71□□□□□ -0.85
CD46-201ENST00000322875 ZBTB40Q9NUA8 1239 aa9.71□□□□□ -0.85
CD46-201ENST00000322875 FGD1P98174 961 aa9.71□□□□□ -0.86
CD46-201ENST00000322875 ANP32BQ92688 251 aaKnown RBP9.71□□□□□ -0.86
CD46-201ENST00000322875 SBNO2Q9Y2G9 1366 aa9.71□□□□□ -0.86
CD46-201ENST00000322875 GLI2P10070 1586 aa9.71□□□□□ -0.86
CD46-201ENST00000322875 TRIM27P14373 513 aa9.71□□□□□ -0.86
CD46-201ENST00000322875 DDX49Q9Y6V7 483 aaKnown RBP9.71□□□□□ -0.86
CD46-201ENST00000322875 IFT172Q9UG01 1749 aa9.7□□□□□ -0.86
CD46-201ENST00000322875 KIF16BQ96L93 1317 aa9.7□□□□□ -0.86
CD46-201ENST00000322875 MED14O60244 1454 aa9.7□□□□□ -0.86
CD46-201ENST00000322875 DDX19BQ9UMR2 479 aa9.7□□□□□ -0.86
CD46-201ENST00000322875 MAP3K4Q9Y6R4 1608 aa9.7□□□□□ -0.86
CD46-201ENST00000322875 AK9Q5TCS8 1911 aa9.69□□□□□ -0.86
CD46-201ENST00000322875 DIP2BQ9P265 1576 aa9.69□□□□□ -0.86
CD46-201ENST00000322875 GOLGA6L22H0YM25 854 aa9.69□□□□□ -0.86
CD46-201ENST00000322875 GTF2F1P35269 517 aaKnown RBP eCLIP9.69□□□□□ -0.86
CD46-201ENST00000322875 MYOM2P54296 1465 aa9.69□□□□□ -0.86
CD46-201ENST00000322875 YEATS2Q9ULM3 1422 aa9.69□□□□□ -0.86
CD46-201ENST00000322875 RRP7AQ9Y3A4 280 aaKnown RBP9.69□□□□□ -0.86
CD46-201ENST00000322875 DEPDC5O75140 1603 aa9.68□□□□□ -0.86
CD46-201ENST00000322875 SLC24A1O60721 1099 aa9.68□□□□□ -0.86
CD46-201ENST00000322875 PRIM1P49642 420 aaKnown RBP9.68□□□□□ -0.86
CD46-201ENST00000322875 ATF7IPQ6VMQ6 1270 aa9.67□□□□□ -0.86
CD46-201ENST00000322875 CHD1LQ86WJ1 897 aa9.67□□□□□ -0.86
CD46-201ENST00000322875 MYRIPQ8NFW9 859 aa9.67□□□□□ -0.86
CD46-201ENST00000322875 RBM42Q9BTD8 480 aaKnown RBP9.67□□□□□ -0.86
CD46-201ENST00000322875 ZNF710Q8N1W2 664 aa9.67□□□□□ -0.86
CD46-201ENST00000322875 GPT2Q8TD30 523 aa9.67□□□□□ -0.86
CD46-201ENST00000322875 NRXN1Q9ULB1 1477 aa9.67□□□□□ -0.86
CD46-201ENST00000322875 FTSJ3Q8IY81 847 aaKnown RBP9.67□□□□□ -0.86
CD46-201ENST00000322875 CCDC39Q9UFE4 941 aa9.67□□□□□ -0.86
CD46-201ENST00000322875 CAVIN1Q6NZI2 390 aaKnown RBP9.66□□□□□ -0.86
CD46-201ENST00000322875 CD109Q6YHK3 1445 aa9.66□□□□□ -0.86
CD46-201ENST00000322875 TBC1D9Q6ZT07 1266 aa9.66□□□□□ -0.86
CD46-201ENST00000322875 LRSAM1Q6UWE0 723 aa9.66□□□□□ -0.86
CD46-201ENST00000322875 NEUROD2Q15784 382 aa9.65□□□□□ -0.86
CD46-201ENST00000322875 SSH1Q8WYL5 1049 aa9.65□□□□□ -0.86
CD46-201ENST00000322875 GTPBP4Q9BZE4 634 aaKnown RBP9.65□□□□□ -0.86
CD46-201ENST00000322875 ZHX1Q9UKY1 873 aaPredicted RBP9.65□□□□□ -0.86
CD46-201ENST00000322875 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.65□□□□□ -0.861e-6■□□□□ 10.9
CD46-201ENST00000322875 ABCC11Q96J66 1382 aa9.65□□□□□ -0.86
CD46-201ENST00000322875 PPIP5K1Q6PFW1 1433 aa9.65□□□□□ -0.86
CD46-201ENST00000322875 TET3O43151 1660 aa9.65□□□□□ -0.86
CD46-201ENST00000322875 A0A0U1RQG5 324 aaPredicted RBP9.65□□□□□ -0.86
CD46-201ENST00000322875 NUCB2P80303 420 aa9.65□□□□□ -0.86
CD46-201ENST00000322875 FOXD4L1Q9NU39 408 aa9.65□□□□□ -0.86
CD46-201ENST00000322875 VWDEQ8N2E2 1590 aa9.65□□□□□ -0.86
CD46-201ENST00000322875 NSD3Q9BZ95 1437 aa9.65□□□□□ -0.86
CD46-201ENST00000322875 TMEM57Q8N5G2 664 aa9.65□□□□□ -0.87
CD46-201ENST00000322875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.65□□□□□ -0.874e-9■■□□□ 11.7
CD46-201ENST00000322875 PRDM10Q9NQV6 1147 aa9.65□□□□□ -0.87
CD46-201ENST00000322875 SETBP1Q9Y6X0 1596 aa9.65□□□□□ -0.87
CD46-201ENST00000322875 KIF20AO95235 890 aa9.64□□□□□ -0.87
CD46-201ENST00000322875 MCTP1Q6DN14 999 aa9.64□□□□□ -0.87
CD46-201ENST00000322875 ZDHHC9Q9Y397 364 aa9.64□□□□□ -0.87
CD46-201ENST00000322875 PIK3R4Q99570 1358 aa9.64□□□□□ -0.87
CD46-201ENST00000322875 BRPF1P55201 1214 aaPredicted RBP9.64□□□□□ -0.87
CD46-201ENST00000322875 ITPRIPQ8IWB1 547 aa9.64□□□□□ -0.87
CD46-201ENST00000322875 LNPKQ9C0E8 428 aa9.64□□□□□ -0.87
CD46-201ENST00000322875 TMEM63CQ9P1W3 806 aa9.64□□□□□ -0.87
CD46-201ENST00000322875 IL16Q14005 1332 aa9.64□□□□□ -0.87
CD46-201ENST00000322875 HMGN5P82970 282 aaKnown RBP9.63□□□□□ -0.87
CD46-201ENST00000322875 PKP1Q13835 747 aa9.63□□□□□ -0.87
CD46-201ENST00000322875 PRIMPOLQ96LW4 560 aa9.63□□□□□ -0.87
CD46-201ENST00000322875 PLEKHF1Q96S99 279 aa9.63□□□□□ -0.87
CD46-201ENST00000322875 SMC4Q9NTJ3 1288 aa9.63□□□□□ -0.87
CD46-201ENST00000322875 NOB1Q9ULX3 412 aaKnown RBP9.63□□□□□ -0.87
CD46-201ENST00000322875 COL3A1P02461 1466 aaPredicted RBP9.63□□□□□ -0.87
CD46-201ENST00000322875 ARHGAP5Q13017 1502 aa9.63□□□□□ -0.87
CD46-201ENST00000322875 EXOSC9Q06265 439 aaKnown RBP9.63□□□□□ -0.87
CD46-201ENST00000322875 RABEP1Q15276 862 aa9.62□□□□□ -0.87
CD46-201ENST00000322875 CWC22Q9HCG8 908 aaKnown RBP9.62□□□□□ -0.87
CD46-201ENST00000322875 TRIM35Q9UPQ4 493 aa9.62□□□□□ -0.87
CD46-201ENST00000322875 TRAPPC8Q9Y2L5 1435 aa9.62□□□□□ -0.87
CD46-201ENST00000322875 TSR2Q969E8 191 aaKnown RBP9.62□□□□□ -0.87
CD46-201ENST00000322875 GCC1Q96CN9 775 aa9.62□□□□□ -0.87
CD46-201ENST00000322875 QRICH2Q9H0J4 1663 aa9.62□□□□□ -0.87
CD46-201ENST00000322875 RBM27Q9P2N5 1060 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms