RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 CRBNQ96SW2 442 aa15.74■□□□□ 0.11
NCL-201ENST00000322723 MS4A1P11836 297 aa15.73■□□□□ 0.11
NCL-201ENST00000322723 CCDC146Q8IYE0 955 aa15.73■□□□□ 0.11
NCL-201ENST00000322723 FYB1O15117 783 aa15.73■□□□□ 0.11
NCL-201ENST00000322723 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.73■□□□□ 0.113e-12■□□□□ 9.5
NCL-201ENST00000322723 MTHFSP49914 203 aa15.73■□□□□ 0.11
NCL-201ENST00000322723 C20orf194Q5TEA3 1177 aa15.73■□□□□ 0.11
NCL-201ENST00000322723 SALL2Q9Y467 1007 aaPredicted RBP15.72■□□□□ 0.11
NCL-201ENST00000322723 AATKQ6ZMQ8 1374 aa15.72■□□□□ 0.11
NCL-201ENST00000322723 PPIP5K1Q6PFW1 1433 aa15.71■□□□□ 0.11
NCL-201ENST00000322723 TCERG1O14776 1098 aaKnown RBP15.71■□□□□ 0.11
NCL-201ENST00000322723 PEAK1Q9H792 1746 aa15.7■□□□□ 0.1
NCL-201ENST00000322723 CDK19Q9BWU1 502 aa15.7■□□□□ 0.1
NCL-201ENST00000322723 PLIN1O60240 522 aa15.7■□□□□ 0.1
NCL-201ENST00000322723 PTCH1Q13635 1447 aa15.7■□□□□ 0.1
NCL-201ENST00000322723 TERF2IPQ9NYB0 399 aa15.69■□□□□ 0.1
NCL-201ENST00000322723 SSH2Q76I76 1423 aa15.69■□□□□ 0.1
NCL-201ENST00000322723 ZBTB47Q9UFB7 747 aaPredicted RBP15.69■□□□□ 0.1
NCL-201ENST00000322723 PTPRUQ92729 1446 aa15.67■□□□□ 0.1
NCL-201ENST00000322723 PDE3AQ14432 1141 aa15.67■□□□□ 0.1
NCL-201ENST00000322723 IL16Q14005 1332 aa15.67■□□□□ 0.1
NCL-201ENST00000322723 TCP11L2Q8N4U5 519 aa15.67■□□□□ 0.1
NCL-201ENST00000322723 MINK1Q8N4C8 1332 aaPredicted RBP15.66■□□□□ 0.1
NCL-201ENST00000322723 CFAP53Q96M91 514 aa15.66■□□□□ 0.1
NCL-201ENST00000322723 RGPD8O14715 1765 aaPredicted RBP15.66■□□□□ 0.1
NCL-201ENST00000322723 CHD2O14647 1828 aaKnown RBP15.65■□□□□ 0.1
NCL-201ENST00000322723 STK26Q9P289 416 aa15.65■□□□□ 0.1
NCL-201ENST00000322723 OVOS2A0A0J9YW53 1432 aa15.65■□□□□ 0.1
NCL-201ENST00000322723 OVOS2Q6IE36 1432 aa15.65■□□□□ 0.1
NCL-201ENST00000322723 ROBO2Q9HCK4 1378 aa15.64■□□□□ 0.09
NCL-201ENST00000322723 WASLO00401 505 aaPredicted RBP15.64■□□□□ 0.09
NCL-201ENST00000322723 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.64■□□□□ 0.09
NCL-201ENST00000322723 CT47B1P0C2W7 299 aaPredicted RBP15.64■□□□□ 0.09
NCL-201ENST00000322723 CENPQQ7L2Z9 268 aaPredicted RBP15.64■□□□□ 0.09
NCL-201ENST00000322723 SRPK2P78362 688 aaKnown RBP15.63■□□□□ 0.09
NCL-201ENST00000322723 PIK3C2AO00443 1686 aa15.63■□□□□ 0.09
NCL-201ENST00000322723 ADAMTSL3P82987 1691 aa15.63■□□□□ 0.09
NCL-201ENST00000322723 AAMPQ13685 434 aa15.63■□□□□ 0.09
NCL-201ENST00000322723 TRIM35Q9UPQ4 493 aa15.63■□□□□ 0.09
NCL-201ENST00000322723 BACH2Q9BYV9 841 aa15.62■□□□□ 0.09
NCL-201ENST00000322723 NOP58Q9Y2X3 529 aaKnown RBP15.62■□□□□ 0.09
NCL-201ENST00000322723 RARSP54136 660 aaKnown RBP15.62■□□□□ 0.09
NCL-201ENST00000322723 POGKQ9P215 609 aa15.62■□□□□ 0.09
NCL-201ENST00000322723 HDGFL2Q7Z4V5 671 aaPredicted RBP15.61■□□□□ 0.09
NCL-201ENST00000322723 CABP1Q9NZU7 370 aa15.61■□□□□ 0.09
NCL-201ENST00000322723 CEP170BQ9Y4F5 1589 aaPredicted RBP15.61■□□□□ 0.09
NCL-201ENST00000322723 LRRC37A3O60309 1634 aa15.61■□□□□ 0.09
NCL-201ENST00000322723 BCAR3O75815 825 aa15.61■□□□□ 0.09
NCL-201ENST00000322723 WAPLQ7Z5K2 1190 aa15.61■□□□□ 0.09
NCL-201ENST00000322723 PRR36Q9H6K5 1346 aa15.6■□□□□ 0.09
NCL-201ENST00000322723 PHRF1Q9P1Y6 1649 aaKnown RBP15.6■□□□□ 0.09
NCL-201ENST00000322723 GGNBP2Q9H3C7 697 aa15.59■□□□□ 0.09
NCL-201ENST00000322723 LAS1LQ9Y4W2 734 aaKnown RBP15.59■□□□□ 0.09
NCL-201ENST00000322723 USP31Q70CQ4 1352 aa15.59■□□□□ 0.09
NCL-201ENST00000322723 SAFB2Q14151 953 aaKnown RBP eCLIP15.58■□□□□ 0.08
NCL-201ENST00000322723 POLKQ9UBT6 870 aa15.58■□□□□ 0.08
NCL-201ENST00000322723 N4BP2Q86UW6 1770 aaPredicted RBP15.58■□□□□ 0.08
NCL-201ENST00000322723 HDGFP51858 240 aaKnown RBP15.58■□□□□ 0.08
NCL-201ENST00000322723 RSPH6AQ9H0K4 717 aa15.58■□□□□ 0.08
NCL-201ENST00000322723 TMPOP42166 694 aaKnown RBP15.57■□□□□ 0.08
NCL-201ENST00000322723 BRPF1P55201 1214 aaPredicted RBP15.56■□□□□ 0.08
NCL-201ENST00000322723 USP6P35125 1406 aa15.56■□□□□ 0.08
NCL-201ENST00000322723 PDE4AP27815 886 aa15.56■□□□□ 0.08
NCL-201ENST00000322723 PLEKHG3A1L390 1219 aa15.55■□□□□ 0.08
NCL-201ENST00000322723 FCHSD2O94868 740 aa15.55■□□□□ 0.08
NCL-201ENST00000322723 TNNT2P45379 298 aaPredicted RBP15.55■□□□□ 0.08
NCL-201ENST00000322723 STAG3Q9UJ98 1225 aa15.55■□□□□ 0.08
NCL-201ENST00000322723 LTKP29376 864 aa15.54■□□□□ 0.08
NCL-201ENST00000322723 IL13P35225 146 aa15.54■□□□□ 0.08
NCL-201ENST00000322723 MYH16Q9H6N6 1097 aa15.54■□□□□ 0.08
NCL-201ENST00000322723 ANKARQ7Z5J8 1434 aa15.54■□□□□ 0.08
NCL-201ENST00000322723 PIK3R4Q99570 1358 aa15.54■□□□□ 0.08
NCL-201ENST00000322723 NUDT16Q96DE0 195 aaKnown RBP15.53■□□□□ 0.08
NCL-201ENST00000322723 DIAPH1O60610 1272 aaKnown RBP15.53■□□□□ 0.08
NCL-201ENST00000322723 ARXQ96QS3 562 aa15.52■□□□□ 0.08
NCL-201ENST00000322723 U2AF1L5P0DN76 240 aaPredicted RBP15.52■□□□□ 0.08
NCL-201ENST00000322723 U2AF1Q01081 240 aaKnown RBP eCLIP15.52■□□□□ 0.084e-16■■□□□ 12.1
NCL-201ENST00000322723 CCDC61Q9Y6R9 512 aa15.52■□□□□ 0.08
NCL-201ENST00000322723 NWD1Q149M9 1564 aa15.52■□□□□ 0.07
NCL-201ENST00000322723 IPO9Q96P70 1041 aaKnown RBP15.52■□□□□ 0.07
NCL-201ENST00000322723 IL27Q8NEV9 243 aa15.52■□□□□ 0.07
NCL-201ENST00000322723 RRP7AQ9Y3A4 280 aaKnown RBP15.52■□□□□ 0.07
NCL-201ENST00000322723 PNNQ9H307 717 aaKnown RBP15.51■□□□□ 0.07
NCL-201ENST00000322723 MLECQ14165 292 aa15.51■□□□□ 0.07
NCL-201ENST00000322723 ZNF692Q9BU19 519 aaPredicted RBP15.51■□□□□ 0.07
NCL-201ENST00000322723 C8orf34Q49A92 452 aa15.51■□□□□ 0.07
NCL-201ENST00000322723 TBX22Q9Y458 520 aa15.5■□□□□ 0.07
NCL-201ENST00000322723 ZNF853P0CG23 659 aa15.5■□□□□ 0.07
NCL-201ENST00000322723 TXNDC2Q86VQ3 553 aa15.5■□□□□ 0.07
NCL-201ENST00000322723 CLUAP1Q96AJ1 413 aa15.5■□□□□ 0.07
NCL-201ENST00000322723 NEFMP07197 916 aa15.49■□□□□ 0.07
NCL-201ENST00000322723 IGHDP01880 384 aa15.49■□□□□ 0.07
NCL-201ENST00000322723 RLBP1P12271 317 aa15.49■□□□□ 0.07
NCL-201ENST00000322723 CAMTA1Q9Y6Y1 1673 aa15.48■□□□□ 0.07
NCL-201ENST00000322723 NME9Q86XW9 330 aa15.47■□□□□ 0.07
NCL-201ENST00000322723 LTN1O94822 1766 aa15.47■□□□□ 0.07
NCL-201ENST00000322723 ZNF428Q96B54 188 aa15.46■□□□□ 0.07
NCL-201ENST00000322723 ALDH1L2Q3SY69 923 aa15.46■□□□□ 0.07
NCL-201ENST00000322723 NFE2L2Q16236 605 aa15.45■□□□□ 0.06
NCL-201ENST00000322723 PANK1Q8TE04 598 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms