RNA–Protein interactions for RNA: ENST00000321517.3

LINC00476-201, long intergenic non-protein coding RNA 476, humanhuman

TSL 1 (best)

Gene LINC00476, Length 1,269 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-201ENST00000321517 TIMELESSQ9UNS1 1208 aa23.8■■□□□ 1.4
LINC00476-201ENST00000321517 CCDC9Q9Y3X0 531 aaKnown RBP23.8■■□□□ 1.4
LINC00476-201ENST00000321517 EIF3AQ14152 1382 aaKnown RBP23.79■■□□□ 1.4
LINC00476-201ENST00000321517 ATP7BP35670 1465 aa23.79■■□□□ 1.4
LINC00476-201ENST00000321517 PAK3O75914 559 aaPredicted RBP23.78■■□□□ 1.4
LINC00476-201ENST00000321517 BTG4Q9NY30 223 aa23.78■■□□□ 1.4
LINC00476-201ENST00000321517 NRAPQ86VF7 1730 aa23.76■■□□□ 1.39
LINC00476-201ENST00000321517 CRYBG1Q9Y4K1 1723 aa23.76■■□□□ 1.39
LINC00476-201ENST00000321517 DEFB132Q7Z7B7 95 aa23.75■■□□□ 1.39
LINC00476-201ENST00000321517 FAM98CQ17RN3 349 aaKnown RBP23.73■■□□□ 1.39
LINC00476-201ENST00000321517 KRT27Q7Z3Y8 459 aa23.73■■□□□ 1.39
LINC00476-201ENST00000321517 SIN3AQ96ST3 1273 aa23.73■■□□□ 1.39
LINC00476-201ENST00000321517 BLMP54132 1417 aaPredicted RBP23.73■■□□□ 1.39
LINC00476-201ENST00000321517 NEUROD1Q13562 356 aa23.72■■□□□ 1.39
LINC00476-201ENST00000321517 NUTM2GQ5VZR2 741 aa23.72■■□□□ 1.39
LINC00476-201ENST00000321517 ZRANB1Q9UGI0 708 aa23.72■■□□□ 1.39
LINC00476-201ENST00000321517 COL14A1Q05707 1796 aaKnown RBP23.71■■□□□ 1.39
LINC00476-201ENST00000321517 KIAA1210Q9ULL0 1709 aa23.71■■□□□ 1.39
LINC00476-201ENST00000321517 ACEP12821 1306 aa23.71■■□□□ 1.39
LINC00476-201ENST00000321517 NBPF8Q3BBV2 869 aa23.71■■□□□ 1.39
LINC00476-201ENST00000321517 PLEKHG3A1L390 1219 aa23.69■■□□□ 1.38
LINC00476-201ENST00000321517 CCDC61Q9Y6R9 512 aa23.69■■□□□ 1.38
LINC00476-201ENST00000321517 ITSN1Q15811 1721 aa23.69■■□□□ 1.38
LINC00476-201ENST00000321517 POLR3AO14802 1390 aaPredicted RBP23.68■■□□□ 1.38
LINC00476-201ENST00000321517 TONSLQ96HA7 1378 aa23.68■■□□□ 1.38
LINC00476-201ENST00000321517 SPATA31A5Q5VU36 1347 aa23.68■■□□□ 1.38
LINC00476-201ENST00000321517 SPATA31A7Q8IWB4 1347 aa23.68■■□□□ 1.38
LINC00476-201ENST00000321517 CHRNA2Q15822 529 aa23.68■■□□□ 1.38
LINC00476-201ENST00000321517 PRDM11Q9NQV5 511 aa23.68■■□□□ 1.38
LINC00476-201ENST00000321517 TOPAZ1Q8N9V7 1692 aa23.67■■□□□ 1.38
LINC00476-201ENST00000321517 KIAA0232Q92628 1395 aa23.66■■□□□ 1.38
LINC00476-201ENST00000321517 A0A0G2JS52 829 aa23.66■■□□□ 1.38
LINC00476-201ENST00000321517 ZC3H6P61129 1189 aaKnown RBP23.66■■□□□ 1.38
LINC00476-201ENST00000321517 MYT1Q01538 1121 aa23.66■■□□□ 1.38
LINC00476-201ENST00000321517 FAM182BQ5T319 152 aa23.66■■□□□ 1.38
LINC00476-201ENST00000321517 L3MBTL2Q969R5 705 aa23.66■■□□□ 1.38
LINC00476-201ENST00000321517 CABP2Q9NPB3 220 aa23.64■■□□□ 1.37
LINC00476-201ENST00000321517 CENPJQ9HC77 1338 aaPredicted RBP23.62■■□□□ 1.37
LINC00476-201ENST00000321517 PHRF1Q9P1Y6 1649 aaKnown RBP23.62■■□□□ 1.37
LINC00476-201ENST00000321517 SPATA31A1Q5TZJ5 1347 aa23.6■■□□□ 1.37
LINC00476-201ENST00000321517 SRPK2P78362 688 aaKnown RBP23.6■■□□□ 1.37
LINC00476-201ENST00000321517 SF3B2Q13435 895 aaKnown RBP23.6■■□□□ 1.37
LINC00476-201ENST00000321517 STRN4Q9NRL3 753 aa23.6■■□□□ 1.37
LINC00476-201ENST00000321517 ABTB2Q8N961 1025 aa23.59■■□□□ 1.37
LINC00476-201ENST00000321517 THSD7AQ9UPZ6 1657 aa23.58■■□□□ 1.37
LINC00476-201ENST00000321517 PPIP5K1Q6PFW1 1433 aa23.58■■□□□ 1.36
LINC00476-201ENST00000321517 CABP1Q9NZU7 370 aa23.56■■□□□ 1.36
LINC00476-201ENST00000321517 USP19O94966 1318 aa23.56■■□□□ 1.36
LINC00476-201ENST00000321517 CAMTA1Q9Y6Y1 1673 aa23.55■■□□□ 1.36
LINC00476-201ENST00000321517 EN1Q05925 392 aaPredicted RBP23.54■■□□□ 1.36
LINC00476-201ENST00000321517 QRICH2Q9H0J4 1663 aa23.54■■□□□ 1.36
LINC00476-201ENST00000321517 NRKQ7Z2Y5 1582 aa23.53■■□□□ 1.36
LINC00476-201ENST00000321517 LARP1Q6PKG0 1096 aaKnown RBP23.53■■□□□ 1.36
LINC00476-201ENST00000321517 USP35Q9P2H5 1018 aa23.53■■□□□ 1.36
LINC00476-201ENST00000321517 GCP02774 474 aa23.52■■□□□ 1.36
LINC00476-201ENST00000321517 BAG6P46379 1132 aa23.52■■□□□ 1.36
LINC00476-201ENST00000321517 SSH2Q76I76 1423 aa23.51■■□□□ 1.35
LINC00476-201ENST00000321517 ZEB1P37275 1124 aaPredicted RBP23.51■■□□□ 1.35
LINC00476-201ENST00000321517 EVA1CP58658 441 aa23.51■■□□□ 1.35
LINC00476-201ENST00000321517 NLRP13Q86W25 1043 aa23.51■■□□□ 1.35
LINC00476-201ENST00000321517 CPDO75976 1380 aa23.51■■□□□ 1.35
LINC00476-201ENST00000321517 TRPM1Q7Z4N2 1603 aa23.49■■□□□ 1.35
LINC00476-201ENST00000321517 LMO7Q8WWI1 1683 aa23.49■■□□□ 1.35
LINC00476-201ENST00000321517 PSDA5PKW4 1024 aaPredicted RBP23.49■■□□□ 1.35
LINC00476-201ENST00000321517 USP6P35125 1406 aa23.48■■□□□ 1.35
LINC00476-201ENST00000321517 BARGINQ6ZT62 677 aa23.47■■□□□ 1.35
LINC00476-201ENST00000321517 TRIM37O94972 964 aa23.46■■□□□ 1.35
LINC00476-201ENST00000321517 RGPD1P0DJD0 1748 aa23.45■■□□□ 1.34
LINC00476-201ENST00000321517 NLRP6P59044 892 aa23.45■■□□□ 1.34
LINC00476-201ENST00000321517 EZH2Q15910 746 aaKnown RBP23.45■■□□□ 1.34
LINC00476-201ENST00000321517 TNS1Q9HBL0 1735 aaKnown RBP23.45■■□□□ 1.34
LINC00476-201ENST00000321517 EVC2Q86UK5 1308 aa23.44■■□□□ 1.34
LINC00476-201ENST00000321517 FAM196AQ6ZSG2 479 aa23.44■■□□□ 1.34
LINC00476-201ENST00000321517 TCP11L2Q8N4U5 519 aa23.44■■□□□ 1.34
LINC00476-201ENST00000321517 BRD4O60885 1362 aaPredicted RBP23.43■■□□□ 1.34
LINC00476-201ENST00000321517 ROCK2O75116 1388 aaKnown RBP23.42■■□□□ 1.34
LINC00476-201ENST00000321517 ZBTB7CA1YPR0 619 aa23.42■■□□□ 1.34
LINC00476-201ENST00000321517 CAMKK2Q96RR4 588 aa23.42■■□□□ 1.34
LINC00476-201ENST00000321517 DISP2A7MBM2 1401 aa23.42■■□□□ 1.34
LINC00476-201ENST00000321517 COL5A2P05997 1499 aaPredicted RBP23.41■■□□□ 1.34
LINC00476-201ENST00000321517 SLIT3O75094 1523 aa23.4■■□□□ 1.34
LINC00476-201ENST00000321517 AXIN2Q9Y2T1 843 aa23.4■■□□□ 1.34
LINC00476-201ENST00000321517 TTC21BQ7Z4L5 1316 aa23.39■■□□□ 1.34
LINC00476-201ENST00000321517 PIK3C2AO00443 1686 aa23.39■■□□□ 1.34
LINC00476-201ENST00000321517 PDE3BQ13370 1112 aa23.39■■□□□ 1.33
LINC00476-201ENST00000321517 R3HDM1Q15032 1099 aaKnown RBP23.38■■□□□ 1.33
LINC00476-201ENST00000321517 AATKQ6ZMQ8 1374 aa23.38■■□□□ 1.33
LINC00476-201ENST00000321517 COL18A1P39060 1754 aa23.37■■□□□ 1.33
LINC00476-201ENST00000321517 APBA3O96018 575 aa23.37■■□□□ 1.33
LINC00476-201ENST00000321517 THRAP3Q9Y2W1 955 aaKnown RBP23.37■■□□□ 1.33
LINC00476-201ENST00000321517 ZNF692Q9BU19 519 aaPredicted RBP23.35■■□□□ 1.33
LINC00476-201ENST00000321517 CRB1P82279 1406 aa23.34■■□□□ 1.33
LINC00476-201ENST00000321517 CPSF1Q10570 1443 aaKnown RBP23.34■■□□□ 1.33
LINC00476-201ENST00000321517 AKAP12Q02952 1782 aa23.34■■□□□ 1.33
LINC00476-201ENST00000321517 LRP5O75197 1615 aa23.33■■□□□ 1.33
LINC00476-201ENST00000321517 ARHGEF25Q86VW2 580 aa23.33■■□□□ 1.33
LINC00476-201ENST00000321517 SOX12O15370 315 aa23.32■■□□□ 1.32
LINC00476-201ENST00000321517 PARP4Q9UKK3 1724 aaKnown RBP23.31■■□□□ 1.32
LINC00476-201ENST00000321517 TOM1L2Q6ZVM7 507 aa23.3■■□□□ 1.32
LINC00476-201ENST00000321517 RGPD5Q99666 1765 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms