RNA–Protein interactions for RNA: ENST00000321265.9

NUDC-201, Transcript of nuclear distribution C, dynein complex regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDC, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDC-201ENST00000321265 GGNBP2Q9H3C7 697 aa24.25■■□□□ 1.47
NUDC-201ENST00000321265 NPC1L1Q9UHC9 1359 aa24.25■■□□□ 1.47
NUDC-201ENST00000321265 FYB1O15117 783 aa24.24■■□□□ 1.47
NUDC-201ENST00000321265 XPCQ01831 940 aaPredicted RBP24.24■■□□□ 1.47
NUDC-201ENST00000321265 DDX17Q92841 729 aaKnown RBP24.24■■□□□ 1.47
NUDC-201ENST00000321265 TTC21BQ7Z4L5 1316 aa24.24■■□□□ 1.47
NUDC-201ENST00000321265 PARD3Q8TEW0 1356 aa24.24■■□□□ 1.47
NUDC-201ENST00000321265 SSH2Q76I76 1423 aa24.23■■□□□ 1.47
NUDC-201ENST00000321265 BRINP3Q76B58 766 aa24.23■■□□□ 1.47
NUDC-201ENST00000321265 NME9Q86XW9 330 aa24.23■■□□□ 1.47
NUDC-201ENST00000321265 PSME1Q06323 249 aa24.22■■□□□ 1.47
NUDC-201ENST00000321265 ZRANB1Q9UGI0 708 aa24.21■■□□□ 1.47
NUDC-201ENST00000321265 PIK3C2AO00443 1686 aa24.2■■□□□ 1.46
NUDC-201ENST00000321265 RALBP1Q15311 655 aa24.2■■□□□ 1.46
NUDC-201ENST00000321265 PAK3O75914 559 aaPredicted RBP24.19■■□□□ 1.46
NUDC-201ENST00000321265 TRPM3Q9HCF6 1732 aaPredicted RBP24.19■■□□□ 1.46
NUDC-201ENST00000321265 NSD2O96028 1365 aa24.19■■□□□ 1.46
NUDC-201ENST00000321265 ROBO1Q9Y6N7 1651 aa24.18■■□□□ 1.46
NUDC-201ENST00000321265 TNNT2P45379 298 aaPredicted RBP24.18■■□□□ 1.46
NUDC-201ENST00000321265 MORC1Q86VD1 984 aa24.18■■□□□ 1.46
NUDC-201ENST00000321265 CCER2I3L3R5 266 aa24.17■■□□□ 1.46
NUDC-201ENST00000321265 KRT28Q7Z3Y7 464 aa24.17■■□□□ 1.46
NUDC-201ENST00000321265 YTHDC1Q96MU7 727 aaKnown RBP24.17■■□□□ 1.46
NUDC-201ENST00000321265 TTC21AQ8NDW8 1320 aa24.15■■□□□ 1.46
NUDC-201ENST00000321265 NPHP3Q7Z494 1330 aa24.15■■□□□ 1.46
NUDC-201ENST00000321265 MARF1Q9Y4F3 1742 aaKnown RBP24.15■■□□□ 1.46
NUDC-201ENST00000321265 CCDC184Q52MB2 194 aa24.14■■□□□ 1.46
NUDC-201ENST00000321265 NUTM2GQ5VZR2 741 aa24.14■■□□□ 1.46
NUDC-201ENST00000321265 MYBBP1AQ9BQG0 1328 aaKnown RBP24.14■■□□□ 1.46
NUDC-201ENST00000321265 NHSL1Q5SYE7 1610 aa24.14■■□□□ 1.46
NUDC-201ENST00000321265 ABTB2Q8N961 1025 aa24.13■■□□□ 1.45
NUDC-201ENST00000321265 PXDNQ92626 1479 aa24.13■■□□□ 1.45
NUDC-201ENST00000321265 COG3Q96JB2 828 aa24.12■■□□□ 1.45
NUDC-201ENST00000321265 MAP2P11137 1827 aaKnown RBP24.12■■□□□ 1.45
NUDC-201ENST00000321265 ALS2Q96Q42 1657 aa24.11■■□□□ 1.45
NUDC-201ENST00000321265 OVOS2A0A0J9YW53 1432 aa24.11■■□□□ 1.45
NUDC-201ENST00000321265 PPP2R1AP30153 589 aa24.11■■□□□ 1.45
NUDC-201ENST00000321265 OVOS2Q6IE36 1432 aa24.11■■□□□ 1.45
NUDC-201ENST00000321265 BRD4O60885 1362 aaPredicted RBP24.11■■□□□ 1.45
NUDC-201ENST00000321265 FBLN1P23142 703 aa24.1■■□□□ 1.45
NUDC-201ENST00000321265 LMOD2Q6P5Q4 547 aa24.1■■□□□ 1.45
NUDC-201ENST00000321265 NLRP6P59044 892 aa24.09■■□□□ 1.45
NUDC-201ENST00000321265 USP54Q70EL1 1684 aa24.08■■□□□ 1.45
NUDC-201ENST00000321265 CENPBP07199 599 aaPredicted RBP24.07■■□□□ 1.44
NUDC-201ENST00000321265 PLEKHG5O94827 1062 aa24.07■■□□□ 1.44
NUDC-201ENST00000321265 NLRP13Q86W25 1043 aa24.07■■□□□ 1.44
NUDC-201ENST00000321265 SOX12O15370 315 aa24.06■■□□□ 1.44
NUDC-201ENST00000321265 USP31Q70CQ4 1352 aa24.06■■□□□ 1.44
NUDC-201ENST00000321265 MRS2Q9HD23 443 aa24.05■■□□□ 1.44
NUDC-201ENST00000321265 SOS2Q07890 1332 aaPredicted RBP24.05■■□□□ 1.44
NUDC-201ENST00000321265 TNS3Q68CZ2 1445 aa24.04■■□□□ 1.44
NUDC-201ENST00000321265 SBNO1A3KN83 1393 aa24.04■■□□□ 1.44
NUDC-201ENST00000321265 AHDC1Q5TGY3 1603 aaPredicted RBP24.02■■□□□ 1.44
NUDC-201ENST00000321265 SPATA31A3Q5VYP0 1347 aa24.02■■□□□ 1.44
NUDC-201ENST00000321265 PHLPP1O60346 1717 aa24.01■■□□□ 1.43
NUDC-201ENST00000321265 MTHFSP49914 203 aa24■■□□□ 1.43
NUDC-201ENST00000321265 RRS1Q15050 365 aaKnown RBP24■■□□□ 1.43
NUDC-201ENST00000321265 FBXO41Q8TF61 875 aa23.98■■□□□ 1.43
NUDC-201ENST00000321265 EMILIN1Q9Y6C2 1016 aa23.98■■□□□ 1.43
NUDC-201ENST00000321265 MED1Q15648 1581 aaPredicted RBP23.98■■□□□ 1.43
NUDC-201ENST00000321265 LTN1O94822 1766 aa23.98■■□□□ 1.43
NUDC-201ENST00000321265 PPM1GO15355 546 aaPredicted RBP23.98■■□□□ 1.43
NUDC-201ENST00000321265 HSPA1LP34931 641 aa23.98■■□□□ 1.43
NUDC-201ENST00000321265 POLKQ9UBT6 870 aa23.98■■□□□ 1.43
NUDC-201ENST00000321265 CRYBG1Q9Y4K1 1723 aa23.97■■□□□ 1.43
NUDC-201ENST00000321265 AATKQ6ZMQ8 1374 aa23.97■■□□□ 1.43
NUDC-201ENST00000321265 PHRF1Q9P1Y6 1649 aaKnown RBP23.97■■□□□ 1.43
NUDC-201ENST00000321265 SLIT3O75094 1523 aa23.95■■□□□ 1.43
NUDC-201ENST00000321265 PEAK1Q9H792 1746 aa23.95■■□□□ 1.42
NUDC-201ENST00000321265 CABLES1Q8TDN4 633 aa23.95■■□□□ 1.42
NUDC-201ENST00000321265 COL16A1Q07092 1604 aaPredicted RBP23.95■■□□□ 1.42
NUDC-201ENST00000321265 ARHGEF10O15013 1369 aa23.94■■□□□ 1.42
NUDC-201ENST00000321265 NFAT5O94916 1531 aa23.94■■□□□ 1.42
NUDC-201ENST00000321265 USP19O94966 1318 aa23.94■■□□□ 1.42
NUDC-201ENST00000321265 GCP02774 474 aa23.92■■□□□ 1.42
NUDC-201ENST00000321265 FAM9BQ8IZU0 186 aa23.92■■□□□ 1.42
NUDC-201ENST00000321265 ABCA3Q99758 1704 aa23.91■■□□□ 1.42
NUDC-201ENST00000321265 MAP3K19Q56UN5 1328 aa23.91■■□□□ 1.42
NUDC-201ENST00000321265 SMG6Q86US8 1419 aaKnown RBP23.91■■□□□ 1.42
NUDC-201ENST00000321265 SHPRHQ149N8 1683 aa23.91■■□□□ 1.42
NUDC-201ENST00000321265 PNISRQ8TF01 805 aaKnown RBP23.9■■□□□ 1.42
NUDC-201ENST00000321265 LRRC59Q96AG4 307 aaKnown RBP23.9■■□□□ 1.42
NUDC-201ENST00000321265 KCNH5Q8NCM2 988 aa23.89■■□□□ 1.42
NUDC-201ENST00000321265 ZBTB7CA1YPR0 619 aa23.89■■□□□ 1.41
NUDC-201ENST00000321265 COL3A1P02461 1466 aaPredicted RBP23.88■■□□□ 1.41
NUDC-201ENST00000321265 CDK12Q9NYV4 1490 aaPredicted RBP23.88■■□□□ 1.41
NUDC-201ENST00000321265 CFAP53Q96M91 514 aa23.87■■□□□ 1.41
NUDC-201ENST00000321265 PNPLA6Q8IY17 1366 aa23.86■■□□□ 1.41
NUDC-201ENST00000321265 ZC3H6P61129 1189 aaKnown RBP23.86■■□□□ 1.41
NUDC-201ENST00000321265 RGPD5Q99666 1765 aa23.85■■□□□ 1.41
NUDC-201ENST00000321265 AMPHP49418 695 aa23.85■■□□□ 1.41
NUDC-201ENST00000321265 HSP90AB2PQ58FF8 381 aa23.84■■□□□ 1.41
NUDC-201ENST00000321265 COL22A1Q8NFW1 1626 aaPredicted RBP23.83■■□□□ 1.41
NUDC-201ENST00000321265 FLT4P35916 1363 aa23.83■■□□□ 1.4
NUDC-201ENST00000321265 HAP1P54257 671 aaPredicted RBP23.82■■□□□ 1.4
NUDC-201ENST00000321265 ARHGEF25Q86VW2 580 aa23.82■■□□□ 1.4
NUDC-201ENST00000321265 HOXC9P31274 260 aa23.82■■□□□ 1.4
NUDC-201ENST00000321265 INSRP06213 1382 aa23.81■■□□□ 1.4
NUDC-201ENST00000321265 DIAPH1O60610 1272 aaKnown RBP23.81■■□□□ 1.4
NUDC-201ENST00000321265 WDR43Q15061 677 aaKnown RBP eCLIP23.81■■□□□ 1.44e-6■■■■□ 26.5
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms