RNA–Protein interactions for RNA: ENST00000319406.8

LCLAT1-202, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2 BASIC

Gene LCLAT1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-202ENST00000319406 CFAP53Q96M91 514 aa13.04□□□□□ -0.32
LCLAT1-202ENST00000319406 MINK1Q8N4C8 1332 aaPredicted RBP13.04□□□□□ -0.32
LCLAT1-202ENST00000319406 RIMS2Q9UQ26 1411 aa13.04□□□□□ -0.32
LCLAT1-202ENST00000319406 FYB1O15117 783 aa13.03□□□□□ -0.32
LCLAT1-202ENST00000319406 SRPK2P78362 688 aaKnown RBP13.03□□□□□ -0.32
LCLAT1-202ENST00000319406 PNPLA6Q8IY17 1366 aa13.03□□□□□ -0.32
LCLAT1-202ENST00000319406 PDE3AQ14432 1141 aa13.03□□□□□ -0.32
LCLAT1-202ENST00000319406 RRP7AQ9Y3A4 280 aaKnown RBP13.03□□□□□ -0.32
LCLAT1-202ENST00000319406 KIF20BQ96Q89 1820 aa13.03□□□□□ -0.32
LCLAT1-202ENST00000319406 PLEKHF1Q96S99 279 aa13.02□□□□□ -0.32
LCLAT1-202ENST00000319406 CDC42BPGQ6DT37 1551 aa13.01□□□□□ -0.33
LCLAT1-202ENST00000319406 GLIPR1L2Q4G1C9 344 aa13.01□□□□□ -0.33
LCLAT1-202ENST00000319406 GGNBP2Q9H3C7 697 aa13.01□□□□□ -0.33
LCLAT1-202ENST00000319406 ATP7BP35670 1465 aa13.01□□□□□ -0.33
LCLAT1-202ENST00000319406 RARSP54136 660 aaKnown RBP13.01□□□□□ -0.33
LCLAT1-202ENST00000319406 CDK19Q9BWU1 502 aa13.01□□□□□ -0.33
LCLAT1-202ENST00000319406 SENP3Q9H4L4 574 aaPredicted RBP13.01□□□□□ -0.33
LCLAT1-202ENST00000319406 TERF2IPQ9NYB0 399 aa13.01□□□□□ -0.33
LCLAT1-202ENST00000319406 USP19O94966 1318 aa13□□□□□ -0.33
LCLAT1-202ENST00000319406 KNDC1Q76NI1 1749 aa13□□□□□ -0.33
LCLAT1-202ENST00000319406 RGS3P49796 1198 aa12.99□□□□□ -0.33
LCLAT1-202ENST00000319406 NEUROD2Q15784 382 aa12.99□□□□□ -0.33
LCLAT1-202ENST00000319406 U2AF1L5P0DN76 240 aaPredicted RBP12.98□□□□□ -0.33
LCLAT1-202ENST00000319406 U2AF1Q01081 240 aaKnown RBP eCLIP12.98□□□□□ -0.33
LCLAT1-202ENST00000319406 TECPR2O15040 1411 aa12.98□□□□□ -0.33
LCLAT1-202ENST00000319406 NAP1L5Q96NT1 182 aaPredicted RBP12.98□□□□□ -0.33
LCLAT1-202ENST00000319406 CABP1Q9NZU7 370 aa12.98□□□□□ -0.33
LCLAT1-202ENST00000319406 STAG3Q9UJ98 1225 aa12.98□□□□□ -0.33
LCLAT1-202ENST00000319406 CPSF1Q10570 1443 aaKnown RBP12.97□□□□□ -0.33
LCLAT1-202ENST00000319406 ZMYM3Q14202 1370 aa12.97□□□□□ -0.33
LCLAT1-202ENST00000319406 HSP90AA2PQ14568 343 aaPredicted RBP12.97□□□□□ -0.33
LCLAT1-202ENST00000319406 METP08581 1390 aa12.96□□□□□ -0.33
LCLAT1-202ENST00000319406 IGHDP01880 384 aa12.96□□□□□ -0.33
LCLAT1-202ENST00000319406 XRCC6P12956 609 aaKnown RBP eCLIP12.96□□□□□ -0.33
LCLAT1-202ENST00000319406 HDGFL2Q7Z4V5 671 aaPredicted RBP12.96□□□□□ -0.33
LCLAT1-202ENST00000319406 WAPLQ7Z5K2 1190 aa12.96□□□□□ -0.33
LCLAT1-202ENST00000319406 TRIM35Q9UPQ4 493 aa12.96□□□□□ -0.33
LCLAT1-202ENST00000319406 CPS1P31327 1500 aa12.96□□□□□ -0.34
LCLAT1-202ENST00000319406 PANK1Q8TE04 598 aa12.96□□□□□ -0.34
LCLAT1-202ENST00000319406 CLUAP1Q96AJ1 413 aa12.95□□□□□ -0.34
LCLAT1-202ENST00000319406 ARXQ96QS3 562 aa12.95□□□□□ -0.34
LCLAT1-202ENST00000319406 SEC24BO95487 1268 aa12.95□□□□□ -0.34
LCLAT1-202ENST00000319406 TMPOP42166 694 aaKnown RBP12.95□□□□□ -0.34
LCLAT1-202ENST00000319406 L1TD1Q5T7N2 865 aaKnown RBP12.95□□□□□ -0.34
LCLAT1-202ENST00000319406 FAM135BQ49AJ0 1406 aa12.95□□□□□ -0.34
LCLAT1-202ENST00000319406 RLBP1P12271 317 aa12.94□□□□□ -0.34
LCLAT1-202ENST00000319406 SLKQ9H2G2 1235 aaPredicted RBP12.94□□□□□ -0.34
LCLAT1-202ENST00000319406 MYH16Q9H6N6 1097 aa12.94□□□□□ -0.34
LCLAT1-202ENST00000319406 COG6Q9Y2V7 657 aa12.94□□□□□ -0.34
LCLAT1-202ENST00000319406 CLCN1P35523 988 aa12.94□□□□□ -0.34
LCLAT1-202ENST00000319406 PANK2Q9BZ23 570 aa12.94□□□□□ -0.34
LCLAT1-202ENST00000319406 LRRC7Q96NW7 1537 aa12.94□□□□□ -0.34
LCLAT1-202ENST00000319406 UBR1Q8IWV7 1749 aa12.94□□□□□ -0.34
LCLAT1-202ENST00000319406 RRP9O43818 475 aaKnown RBP12.93□□□□□ -0.34
LCLAT1-202ENST00000319406 CT47B1P0C2W7 299 aaPredicted RBP12.93□□□□□ -0.34
LCLAT1-202ENST00000319406 MLECQ14165 292 aa12.93□□□□□ -0.34
LCLAT1-202ENST00000319406 SIRT1Q96EB6 747 aa12.93□□□□□ -0.34
LCLAT1-202ENST00000319406 PNNQ9H307 717 aaKnown RBP12.93□□□□□ -0.34
LCLAT1-202ENST00000319406 TNNQ9UQP3 1299 aa12.93□□□□□ -0.34
LCLAT1-202ENST00000319406 MON2Q7Z3U7 1717 aa12.93□□□□□ -0.34
LCLAT1-202ENST00000319406 AAMPQ13685 434 aa12.93□□□□□ -0.34
LCLAT1-202ENST00000319406 IL16Q14005 1332 aa12.93□□□□□ -0.34
LCLAT1-202ENST00000319406 VIRMAQ69YN4 1812 aaKnown RBP12.93□□□□□ -0.34
LCLAT1-202ENST00000319406 EDC4Q6P2E9 1401 aaKnown RBP12.92□□□□□ -0.34
LCLAT1-202ENST00000319406 HSP90AA1P07900 732 aaKnown RBP12.92□□□□□ -0.34
LCLAT1-202ENST00000319406 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.92□□□□□ -0.34
LCLAT1-202ENST00000319406 ANTXR1Q9H6X2 564 aa12.92□□□□□ -0.34
LCLAT1-202ENST00000319406 WASLO00401 505 aaPredicted RBP12.92□□□□□ -0.34
LCLAT1-202ENST00000319406 DIAPH1O60610 1272 aaKnown RBP12.92□□□□□ -0.34
LCLAT1-202ENST00000319406 POLKQ9UBT6 870 aa12.92□□□□□ -0.34
LCLAT1-202ENST00000319406 AKAP12Q02952 1782 aa12.91□□□□□ -0.34
LCLAT1-202ENST00000319406 U2SURPO15042 1029 aaKnown RBP12.91□□□□□ -0.34
LCLAT1-202ENST00000319406 PPIP5K1Q6PFW1 1433 aa12.91□□□□□ -0.34
LCLAT1-202ENST00000319406 MAP2P11137 1827 aaKnown RBP12.91□□□□□ -0.34
LCLAT1-202ENST00000319406 FSD2A1L4K1 749 aa12.91□□□□□ -0.34
LCLAT1-202ENST00000319406 C3P01024 1663 aa12.91□□□□□ -0.34
LCLAT1-202ENST00000319406 TNRQ92752 1358 aa12.9□□□□□ -0.34
LCLAT1-202ENST00000319406 TMEM2Q9UHN6 1383 aa12.9□□□□□ -0.34
LCLAT1-202ENST00000319406 ADAMTS13Q76LX8 1427 aa12.9□□□□□ -0.34
LCLAT1-202ENST00000319406 TSR2Q969E8 191 aaKnown RBP12.9□□□□□ -0.34
LCLAT1-202ENST00000319406 BCL2L13Q9BXK5 485 aa12.9□□□□□ -0.34
LCLAT1-202ENST00000319406 AATKQ6ZMQ8 1374 aa12.9□□□□□ -0.34
LCLAT1-202ENST00000319406 CANXP27824 592 aaKnown RBP12.89□□□□□ -0.35
LCLAT1-202ENST00000319406 PCDHB15Q9Y5E8 787 aa12.89□□□□□ -0.35
LCLAT1-202ENST00000319406 CDK12Q9NYV4 1490 aaPredicted RBP12.89□□□□□ -0.35
LCLAT1-202ENST00000319406 FCHSD2O94868 740 aa12.89□□□□□ -0.35
LCLAT1-202ENST00000319406 MAPK8IP3Q9UPT6 1336 aa12.88□□□□□ -0.35
LCLAT1-202ENST00000319406 FBLN1P23142 703 aa12.88□□□□□ -0.35
LCLAT1-202ENST00000319406 GOLGA6L3A6NEY3 463 aa12.87□□□□□ -0.35
LCLAT1-202ENST00000319406 EXOSC9Q06265 439 aaKnown RBP12.87□□□□□ -0.35
LCLAT1-202ENST00000319406 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.87□□□□□ -0.351e-6■□□□□ 10.6
LCLAT1-202ENST00000319406 TOPAZ1Q8N9V7 1692 aa12.87□□□□□ -0.35
LCLAT1-202ENST00000319406 NRKQ7Z2Y5 1582 aa12.87□□□□□ -0.35
LCLAT1-202ENST00000319406 MVPQ14764 893 aaKnown RBP12.87□□□□□ -0.35
LCLAT1-202ENST00000319406 TXNDC2Q86VQ3 553 aa12.87□□□□□ -0.35
LCLAT1-202ENST00000319406 GZF1Q9H116 711 aaPredicted RBP12.87□□□□□ -0.35
LCLAT1-202ENST00000319406 RIPK4P57078 832 aa12.86□□□□□ -0.35
LCLAT1-202ENST00000319406 ROBO2Q9HCK4 1378 aa12.86□□□□□ -0.35
LCLAT1-202ENST00000319406 PRR36Q9H6K5 1346 aa12.86□□□□□ -0.35
LCLAT1-202ENST00000319406 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms