RNA–Protein interactions for RNA: ENST00000316824.3

ALX1-201, Transcript of ALX homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALX1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALX1-201ENST00000316824 POLR3AO14802 1390 aaPredicted RBP17.78■□□□□ 0.44
ALX1-201ENST00000316824 TMEM94Q12767 1356 aa17.78■□□□□ 0.44
ALX1-201ENST00000316824 KIF1AQ12756 1690 aa17.76■□□□□ 0.43
ALX1-201ENST00000316824 CNGB1Q14028 1251 aaPredicted RBP17.76■□□□□ 0.43
ALX1-201ENST00000316824 C19orf44Q9H6X5 657 aa17.76■□□□□ 0.43
ALX1-201ENST00000316824 USP6P35125 1406 aa17.76■□□□□ 0.43
ALX1-201ENST00000316824 MRS2Q9HD23 443 aa17.75■□□□□ 0.43
ALX1-201ENST00000316824 LRRC7Q96NW7 1537 aa17.75■□□□□ 0.43
ALX1-201ENST00000316824 MSH6P52701 1360 aa17.75■□□□□ 0.43
ALX1-201ENST00000316824 XIRP1Q702N8 1843 aaKnown RBP17.75■□□□□ 0.43
ALX1-201ENST00000316824 ACEP12821 1306 aa17.73■□□□□ 0.43
ALX1-201ENST00000316824 NUTM2FA1L443 756 aa17.72■□□□□ 0.43
ALX1-201ENST00000316824 ZNF335Q9H4Z2 1342 aaPredicted RBP17.72■□□□□ 0.43
ALX1-201ENST00000316824 MORC1Q86VD1 984 aa17.72■□□□□ 0.43
ALX1-201ENST00000316824 RBM33Q96EV2 1170 aaKnown RBP17.72■□□□□ 0.43
ALX1-201ENST00000316824 SSH2Q76I76 1423 aa17.7■□□□□ 0.42
ALX1-201ENST00000316824 ATF3P18847 181 aa17.7■□□□□ 0.42
ALX1-201ENST00000316824 PPP2R1AP30153 589 aa17.7■□□□□ 0.42
ALX1-201ENST00000316824 CADPS2Q86UW7 1296 aa17.7■□□□□ 0.42
ALX1-201ENST00000316824 NGDNQ8NEJ9 315 aaKnown RBP17.7■□□□□ 0.42
ALX1-201ENST00000316824 C1orf167Q5SNV9 1468 aa17.7■□□□□ 0.42
ALX1-201ENST00000316824 TTC21AQ8NDW8 1320 aa17.69■□□□□ 0.42
ALX1-201ENST00000316824 MST1RQ04912 1400 aa17.69■□□□□ 0.42
ALX1-201ENST00000316824 FYB1O15117 783 aa17.69■□□□□ 0.42
ALX1-201ENST00000316824 USP54Q70EL1 1684 aa17.68■□□□□ 0.42
ALX1-201ENST00000316824 PHF8Q9UPP1 1060 aa17.68■□□□□ 0.42
ALX1-201ENST00000316824 TTC21BQ7Z4L5 1316 aa17.67■□□□□ 0.42
ALX1-201ENST00000316824 CCDC184Q52MB2 194 aa17.66■□□□□ 0.42
ALX1-201ENST00000316824 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.66■□□□□ 0.42
ALX1-201ENST00000316824 PMFBP1Q8TBY8 1022 aa17.66■□□□□ 0.42
ALX1-201ENST00000316824 GGNBP2Q9H3C7 697 aa17.65■□□□□ 0.42
ALX1-201ENST00000316824 OVOS2A0A0J9YW53 1432 aa17.65■□□□□ 0.42
ALX1-201ENST00000316824 OVOS2Q6IE36 1432 aa17.65■□□□□ 0.42
ALX1-201ENST00000316824 PIK3C2AO00443 1686 aa17.65■□□□□ 0.42
ALX1-201ENST00000316824 ESCO1Q5FWF5 840 aa17.64■□□□□ 0.42
ALX1-201ENST00000316824 INSRP06213 1382 aa17.64■□□□□ 0.41
ALX1-201ENST00000316824 COG3Q96JB2 828 aa17.63■□□□□ 0.41
ALX1-201ENST00000316824 YTHDC1Q96MU7 727 aaKnown RBP17.63■□□□□ 0.41
ALX1-201ENST00000316824 AATKQ6ZMQ8 1374 aa17.62■□□□□ 0.41
ALX1-201ENST00000316824 LTBP4Q8N2S1 1624 aa17.62■□□□□ 0.41
ALX1-201ENST00000316824 NME9Q86XW9 330 aa17.62■□□□□ 0.41
ALX1-201ENST00000316824 PNISRQ8TF01 805 aaKnown RBP17.62■□□□□ 0.41
ALX1-201ENST00000316824 USP31Q70CQ4 1352 aa17.61■□□□□ 0.41
ALX1-201ENST00000316824 SMG6Q86US8 1419 aaKnown RBP17.61■□□□□ 0.41
ALX1-201ENST00000316824 TRPM3Q9HCF6 1732 aaPredicted RBP17.6■□□□□ 0.41
ALX1-201ENST00000316824 CFAP53Q96M91 514 aa17.6■□□□□ 0.41
ALX1-201ENST00000316824 FAM9BQ8IZU0 186 aa17.59■□□□□ 0.41
ALX1-201ENST00000316824 TNNT2P45379 298 aaPredicted RBP17.58■□□□□ 0.41
ALX1-201ENST00000316824 ORAI2Q96SN7 254 aa17.58■□□□□ 0.41
ALX1-201ENST00000316824 CDK12Q9NYV4 1490 aaPredicted RBP17.58■□□□□ 0.4
ALX1-201ENST00000316824 CENPBP07199 599 aaPredicted RBP17.57■□□□□ 0.4
ALX1-201ENST00000316824 PSME1Q06323 249 aa17.57■□□□□ 0.4
ALX1-201ENST00000316824 MARF1Q9Y4F3 1742 aaKnown RBP17.57■□□□□ 0.4
ALX1-201ENST00000316824 SHPRHQ149N8 1683 aa17.56■□□□□ 0.4
ALX1-201ENST00000316824 NPHP3Q7Z494 1330 aa17.56■□□□□ 0.4
ALX1-201ENST00000316824 BLMP54132 1417 aaPredicted RBP17.56■□□□□ 0.4
ALX1-201ENST00000316824 MTHFSP49914 203 aa17.55■□□□□ 0.4
ALX1-201ENST00000316824 WDR43Q15061 677 aaKnown RBP eCLIP17.55■□□□□ 0.4
ALX1-201ENST00000316824 COL3A1P02461 1466 aaPredicted RBP17.55■□□□□ 0.4
ALX1-201ENST00000316824 MAP2P11137 1827 aaKnown RBP17.55■□□□□ 0.4
ALX1-201ENST00000316824 ALS2Q96Q42 1657 aa17.54■□□□□ 0.4
ALX1-201ENST00000316824 SBNO1A3KN83 1393 aa17.53■□□□□ 0.4
ALX1-201ENST00000316824 PNPLA6Q8IY17 1366 aa17.53■□□□□ 0.4
ALX1-201ENST00000316824 FOXO3O43524 673 aa17.53■□□□□ 0.4
ALX1-201ENST00000316824 CAPN15O75808 1086 aa17.53■□□□□ 0.4
ALX1-201ENST00000316824 PAK3O75914 559 aaPredicted RBP17.53■□□□□ 0.4
ALX1-201ENST00000316824 PXDNQ92626 1479 aa17.53■□□□□ 0.4
ALX1-201ENST00000316824 ABTB2Q8N961 1025 aa17.52■□□□□ 0.4
ALX1-201ENST00000316824 SLAIN2Q9P270 581 aa17.52■□□□□ 0.4
ALX1-201ENST00000316824 ZRANB1Q9UGI0 708 aa17.52■□□□□ 0.4
ALX1-201ENST00000316824 NHSL1Q5SYE7 1610 aa17.52■□□□□ 0.39
ALX1-201ENST00000316824 HNRNPUQ00839 825 aaKnown RBP eCLIP17.51■□□□□ 0.39
ALX1-201ENST00000316824 SPINK5Q9NQ38 1064 aaPredicted RBP17.51■□□□□ 0.39
ALX1-201ENST00000316824 KIF24Q5T7B8 1368 aa17.51■□□□□ 0.39
ALX1-201ENST00000316824 SLIT3O75094 1523 aa17.5■□□□□ 0.39
ALX1-201ENST00000316824 ATXN8OSP0DMR3 200 aa17.5■□□□□ 0.39
ALX1-201ENST00000316824 NLRP6P59044 892 aa17.5■□□□□ 0.39
ALX1-201ENST00000316824 BRINP3Q76B58 766 aa17.5■□□□□ 0.39
ALX1-201ENST00000316824 KRT28Q7Z3Y7 464 aa17.5■□□□□ 0.39
ALX1-201ENST00000316824 POLKQ9UBT6 870 aa17.5■□□□□ 0.39
ALX1-201ENST00000316824 TNS3Q68CZ2 1445 aa17.5■□□□□ 0.39
ALX1-201ENST00000316824 IQSEC2Q5JU85 1478 aa17.49■□□□□ 0.39
ALX1-201ENST00000316824 MED1Q15648 1581 aaPredicted RBP17.48■□□□□ 0.39
ALX1-201ENST00000316824 NUDCQ9Y266 331 aa17.48■□□□□ 0.39
ALX1-201ENST00000316824 NFAT5O94916 1531 aa17.48■□□□□ 0.39
ALX1-201ENST00000316824 PHRF1Q9P1Y6 1649 aaKnown RBP17.48■□□□□ 0.39
ALX1-201ENST00000316824 ZNF219Q9P2Y4 722 aaPredicted RBP17.47■□□□□ 0.39
ALX1-201ENST00000316824 ARHGEF10O15013 1369 aa17.47■□□□□ 0.39
ALX1-201ENST00000316824 ZBED9Q6R2W3 1325 aa17.47■□□□□ 0.39
ALX1-201ENST00000316824 KCNH5Q8NCM2 988 aa17.47■□□□□ 0.39
ALX1-201ENST00000316824 RTL1A6NKG5 1358 aa17.46■□□□□ 0.39
ALX1-201ENST00000316824 USP19O94966 1318 aa17.46■□□□□ 0.39
ALX1-201ENST00000316824 PEAK1Q9H792 1746 aa17.46■□□□□ 0.39
ALX1-201ENST00000316824 EMILIN1Q9Y6C2 1016 aa17.46■□□□□ 0.39
ALX1-201ENST00000316824 FLT4P35916 1363 aa17.46■□□□□ 0.39
ALX1-201ENST00000316824 LTN1O94822 1766 aa17.45■□□□□ 0.38
ALX1-201ENST00000316824 ROBO1Q9Y6N7 1651 aa17.45■□□□□ 0.38
ALX1-201ENST00000316824 DIAPH1O60610 1272 aaKnown RBP17.45■□□□□ 0.38
ALX1-201ENST00000316824 XPCQ01831 940 aaPredicted RBP17.45■□□□□ 0.38
ALX1-201ENST00000316824 ADAMTS8Q9UP79 889 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms