RNA–Protein interactions for RNA: ENST00000316731.12

CCZ1B-201, Transcript of CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCZ1B, Length 2,885 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCZ1B-201ENST00000316731 HSP90AA2PQ14568 343 aaPredicted RBP28.38■■■□□ 2.13
CCZ1B-201ENST00000316731 MVPQ14764 893 aaKnown RBP28.38■■■□□ 2.13
CCZ1B-201ENST00000316731 SLC52A1Q9NWF4 448 aa28.37■■■□□ 2.13
CCZ1B-201ENST00000316731 ARHGEF28Q8N1W1 1705 aaKnown RBP28.37■■■□□ 2.13
CCZ1B-201ENST00000316731 TSR2Q969E8 191 aaKnown RBP28.36■■■□□ 2.13
CCZ1B-201ENST00000316731 POLR3AO14802 1390 aaPredicted RBP28.36■■■□□ 2.13
CCZ1B-201ENST00000316731 HSCBQ8IWL3 235 aa28.36■■■□□ 2.13
CCZ1B-201ENST00000316731 SLC12A5Q9H2X9 1139 aa28.35■■■□□ 2.13
CCZ1B-201ENST00000316731 TMEM131LA2VDJ0 1609 aa28.34■■■□□ 2.13
CCZ1B-201ENST00000316731 FOXD4L1Q9NU39 408 aa28.34■■■□□ 2.13
CCZ1B-201ENST00000316731 PKNOX2Q96KN3 472 aa28.33■■■□□ 2.13
CCZ1B-201ENST00000316731 MTHFSP49914 203 aa28.33■■■□□ 2.13
CCZ1B-201ENST00000316731 DZIP1LQ8IYY4 767 aaKnown RBP28.33■■■□□ 2.12
CCZ1B-201ENST00000316731 GLIPR1L2Q4G1C9 344 aa28.32■■■□□ 2.12
CCZ1B-201ENST00000316731 ZFYVE9O95405 1425 aa28.32■■■□□ 2.12
CCZ1B-201ENST00000316731 ESPNB1AK53 854 aa28.32■■■□□ 2.12
CCZ1B-201ENST00000316731 ZKSCAN2Q63HK3 967 aa28.31■■■□□ 2.12
CCZ1B-201ENST00000316731 ITPRIPQ8IWB1 547 aa28.31■■■□□ 2.12
CCZ1B-201ENST00000316731 NSD3Q9BZ95 1437 aa28.31■■■□□ 2.12
CCZ1B-201ENST00000316731 GAS2L3Q86XJ1 694 aa28.31■■■□□ 2.12
CCZ1B-201ENST00000316731 ZNF692Q9BU19 519 aaPredicted RBP28.31■■■□□ 2.12
CCZ1B-201ENST00000316731 REREQ9P2R6 1566 aa28.3■■■□□ 2.12
CCZ1B-201ENST00000316731 WDR63Q8IWG1 891 aa28.3■■■□□ 2.12
CCZ1B-201ENST00000316731 AAMPQ13685 434 aa28.29■■■□□ 2.12
CCZ1B-201ENST00000316731 SMC4Q9NTJ3 1288 aa28.29■■■□□ 2.12
CCZ1B-201ENST00000316731 DDX11L8A8MPP1 907 aa28.27■■■□□ 2.12
CCZ1B-201ENST00000316731 U2AF1L5P0DN76 240 aaPredicted RBP28.27■■■□□ 2.12
CCZ1B-201ENST00000316731 U2AF1Q01081 240 aaKnown RBP eCLIP28.27■■■□□ 2.12
CCZ1B-201ENST00000316731 TNPO1Q92973 898 aaKnown RBP28.27■■■□□ 2.12
CCZ1B-201ENST00000316731 PHF23Q9BUL5 403 aaPredicted RBP28.27■■■□□ 2.12
CCZ1B-201ENST00000316731 ZMYND15Q9H091 742 aa28.27■■■□□ 2.12
CCZ1B-201ENST00000316731 FBXO31Q5XUX0 539 aaPredicted RBP28.26■■■□□ 2.11
CCZ1B-201ENST00000316731 TRIM44Q96DX7 344 aaPredicted RBP28.26■■■□□ 2.11
CCZ1B-201ENST00000316731 AGLP35573 1532 aa28.26■■■□□ 2.11
CCZ1B-201ENST00000316731 TULP4Q9NRJ4 1543 aa28.26■■■□□ 2.11
CCZ1B-201ENST00000316731 TRIM27P14373 513 aa28.25■■■□□ 2.11
CCZ1B-201ENST00000316731 ZMYM3Q14202 1370 aa28.25■■■□□ 2.11
CCZ1B-201ENST00000316731 SHPRHQ149N8 1683 aa28.24■■■□□ 2.11
CCZ1B-201ENST00000316731 EXOSC9Q06265 439 aaKnown RBP28.24■■■□□ 2.11
CCZ1B-201ENST00000316731 LNPKQ9C0E8 428 aa28.22■■■□□ 2.11
CCZ1B-201ENST00000316731 IQSEC2Q5JU85 1478 aa28.22■■■□□ 2.11
CCZ1B-201ENST00000316731 CLTCQ00610 1675 aaKnown RBP28.21■■■□□ 2.11
CCZ1B-201ENST00000316731 HSP90AB1P08238 724 aaKnown RBP28.21■■■□□ 2.11
CCZ1B-201ENST00000316731 USP32Q8NFA0 1604 aa28.21■■■□□ 2.11
CCZ1B-201ENST00000316731 EVC2Q86UK5 1308 aa28.21■■■□□ 2.11
CCZ1B-201ENST00000316731 SSH1Q8WYL5 1049 aa28.21■■■□□ 2.11
CCZ1B-201ENST00000316731 RRP9O43818 475 aaKnown RBP28.2■■■□□ 2.11
CCZ1B-201ENST00000316731 PUS7Q96PZ0 661 aaKnown RBP28.19■■■□□ 2.1
CCZ1B-201ENST00000316731 SENP3Q9H4L4 574 aaPredicted RBP28.19■■■□□ 2.1
CCZ1B-201ENST00000316731 NOB1Q9ULX3 412 aaKnown RBP28.18■■■□□ 2.1
CCZ1B-201ENST00000316731 CD2BP2O95400 341 aaKnown RBP28.17■■■□□ 2.1
CCZ1B-201ENST00000316731 KIF13AQ9H1H9 1805 aa28.17■■■□□ 2.1
CCZ1B-201ENST00000316731 TMEM57Q8N5G2 664 aa28.17■■■□□ 2.1
CCZ1B-201ENST00000316731 DDIT3P35638 169 aa28.17■■■□□ 2.1
CCZ1B-201ENST00000316731 CFAP53Q96M91 514 aa28.17■■■□□ 2.1
CCZ1B-201ENST00000316731 PPP6R1Q9UPN7 881 aa28.17■■■□□ 2.1
CCZ1B-201ENST00000316731 HDAC1Q13547 482 aaPredicted RBP28.15■■■□□ 2.1
CCZ1B-201ENST00000316731 STK26Q9P289 416 aa28.15■■■□□ 2.1
CCZ1B-201ENST00000316731 U2SURPO15042 1029 aaKnown RBP28.14■■■□□ 2.1
CCZ1B-201ENST00000316731 SAFB2Q14151 953 aaKnown RBP eCLIP28.14■■■□□ 2.1
CCZ1B-201ENST00000316731 CCDC27Q2M243 656 aa28.14■■■□□ 2.1
CCZ1B-201ENST00000316731 RBM42Q9BTD8 480 aaKnown RBP28.14■■■□□ 2.1
CCZ1B-201ENST00000316731 DDX19BQ9UMR2 479 aa28.14■■■□□ 2.1
CCZ1B-201ENST00000316731 PTPRMP28827 1452 aa28.13■■■□□ 2.09
CCZ1B-201ENST00000316731 ATF7IPQ6VMQ6 1270 aa28.13■■■□□ 2.09
CCZ1B-201ENST00000316731 SMC5Q8IY18 1101 aa28.13■■■□□ 2.09
CCZ1B-201ENST00000316731 ANKRD36BQ8N2N9 1353 aa28.12■■■□□ 2.09
CCZ1B-201ENST00000316731 SPATA31D1Q6ZQQ2 1576 aa28.12■■■□□ 2.09
CCZ1B-201ENST00000316731 CABP2Q9NPB3 220 aa28.12■■■□□ 2.09
CCZ1B-201ENST00000316731 ARHGEF40Q8TER5 1519 aa28.11■■■□□ 2.09
CCZ1B-201ENST00000316731 GBP4Q96PP9 640 aa28.11■■■□□ 2.09
CCZ1B-201ENST00000316731 ALKQ9UM73 1620 aa28.11■■■□□ 2.09
CCZ1B-201ENST00000316731 RBM25P49756 843 aaKnown RBP28.1■■■□□ 2.09
CCZ1B-201ENST00000316731 YTHDC2Q9H6S0 1430 aaKnown RBP28.1■■■□□ 2.09
CCZ1B-201ENST00000316731 NCOA3Q9Y6Q9 1424 aa28.1■■■□□ 2.09
CCZ1B-201ENST00000316731 RAB3GAP1Q15042 981 aa28.09■■■□□ 2.09
CCZ1B-201ENST00000316731 STAG3Q9UJ98 1225 aa28.09■■■□□ 2.09
CCZ1B-201ENST00000316731 SSFA2P28290 1259 aa28.07■■■□□ 2.08
CCZ1B-201ENST00000316731 MLECQ14165 292 aa28.07■■■□□ 2.08
CCZ1B-201ENST00000316731 SNX21Q969T3 373 aa28.07■■■□□ 2.08
CCZ1B-201ENST00000316731 KIF2CQ99661 725 aa28.07■■■□□ 2.08
CCZ1B-201ENST00000316731 ZBTB40Q9NUA8 1239 aa28.07■■■□□ 2.08
CCZ1B-201ENST00000316731 A2ML1A8K2U0 1454 aa28.06■■■□□ 2.08
CCZ1B-201ENST00000316731 C1orf115Q9H7X2 142 aa28.05■■■□□ 2.08
CCZ1B-201ENST00000316731 NUCB1Q02818 461 aa28.05■■■□□ 2.08
CCZ1B-201ENST00000316731 ISY1Q9ULR0 285 aaKnown RBP28.05■■■□□ 2.08
CCZ1B-201ENST00000316731 CHD1LQ86WJ1 897 aa28.04■■■□□ 2.08
CCZ1B-201ENST00000316731 PRAM1Q96QH2 718 aa28.04■■■□□ 2.08
CCZ1B-201ENST00000316731 KIAA1211Q6ZU35 1233 aa28.04■■■□□ 2.08
CCZ1B-201ENST00000316731 TRIM35Q9UPQ4 493 aa28.04■■■□□ 2.08
CCZ1B-201ENST00000316731 ANKRD45Q5TZF3 282 aa28.03■■■□□ 2.08
CCZ1B-201ENST00000316731 NSD2O96028 1365 aa28.03■■■□□ 2.08
CCZ1B-201ENST00000316731 TMPOP42166 694 aaKnown RBP28.02■■■□□ 2.08
CCZ1B-201ENST00000316731 SRPK2P78362 688 aaKnown RBP28.02■■■□□ 2.08
CCZ1B-201ENST00000316731 MINK1Q8N4C8 1332 aaPredicted RBP28.02■■■□□ 2.08
CCZ1B-201ENST00000316731 NASPP49321 788 aaPredicted RBP28.01■■■□□ 2.08
CCZ1B-201ENST00000316731 GAS2L2Q8NHY3 880 aa28.01■■■□□ 2.07
CCZ1B-201ENST00000316731 A0A1W2PP64 1363 aa28.01■■■□□ 2.07
CCZ1B-201ENST00000316731 SKOR2Q2VWA4 1001 aaPredicted RBP27.99■■■□□ 2.07
CCZ1B-201ENST00000316731 CIZ1Q9ULV3 898 aaPredicted RBP27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms