RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 AQRO60306 1485 aaKnown RBP eCLIP25.06■■□□□ 1.63e-7■■■■■ 30.3
KDM3B-201ENST00000314358 KRT18P05783 430 aaKnown RBP25.06■■□□□ 1.6
KDM3B-201ENST00000314358 NLRP2Q9NX02 1062 aa25.05■■□□□ 1.6
KDM3B-201ENST00000314358 CNTROBQ8N137 903 aa25.05■■□□□ 1.6
KDM3B-201ENST00000314358 XBP1P17861 261 aa25.05■■□□□ 1.6
KDM3B-201ENST00000314358 CENPHQ9H3R5 247 aa25.05■■□□□ 1.6
KDM3B-201ENST00000314358 TSPY26PQ9H489 355 aa25.05■■□□□ 1.6
KDM3B-201ENST00000314358 MAGEC2Q9UBF1 373 aaPredicted RBP25.05■■□□□ 1.6
KDM3B-201ENST00000314358 MYOM3Q5VTT5 1437 aa25.05■■□□□ 1.6
KDM3B-201ENST00000314358 NEK4P51957 841 aa25.04■■□□□ 1.6
KDM3B-201ENST00000314358 FAM193AP78312 1265 aa25.04■■□□□ 1.6
KDM3B-201ENST00000314358 KINO60870 393 aaKnown RBP25.03■■□□□ 1.6
KDM3B-201ENST00000314358 RAPGEF4Q8WZA2 1011 aa25.03■■□□□ 1.6
KDM3B-201ENST00000314358 SURF6O75683 361 aaKnown RBP25.03■■□□□ 1.6
KDM3B-201ENST00000314358 PPP1R1BQ9UD71 204 aaPredicted RBP25.03■■□□□ 1.6
KDM3B-201ENST00000314358 CABP2Q9NPB3 220 aa25.02■■□□□ 1.6
KDM3B-201ENST00000314358 MRE11P49959 708 aa25.02■■□□□ 1.6
KDM3B-201ENST00000314358 NINLQ9Y2I6 1382 aa25.02■■□□□ 1.6
KDM3B-201ENST00000314358 CWC15Q9P013 229 aaKnown RBP25.02■■□□□ 1.6
KDM3B-201ENST00000314358 SYCP1Q15431 976 aa25.01■■□□□ 1.59
KDM3B-201ENST00000314358 CT47B1P0C2W7 299 aaPredicted RBP25.01■■□□□ 1.59
KDM3B-201ENST00000314358 IBSPP21815 317 aaPredicted RBP25■■□□□ 1.59
KDM3B-201ENST00000314358 PSMA5P28066 241 aa25■■□□□ 1.59
KDM3B-201ENST00000314358 HSP90AB4PQ58FF6 505 aa25■■□□□ 1.59
KDM3B-201ENST00000314358 IL27Q8NEV9 243 aa25■■□□□ 1.59
KDM3B-201ENST00000314358 ERCC4Q92889 916 aaPredicted RBP25■■□□□ 1.59
KDM3B-201ENST00000314358 GNAI1P63096 354 aa24.99■■□□□ 1.59
KDM3B-201ENST00000314358 ENOX2Q16206 610 aaKnown RBP24.99■■□□□ 1.59
KDM3B-201ENST00000314358 SERPINC1P01008 464 aa24.99■■□□□ 1.59
KDM3B-201ENST00000314358 FILIP1LQ4L180 1135 aa24.98■■□□□ 1.59
KDM3B-201ENST00000314358 LEKR1Q6ZMV7 388 aa24.98■■□□□ 1.59
KDM3B-201ENST00000314358 SMARCE1Q969G3 411 aa24.98■■□□□ 1.59
KDM3B-201ENST00000314358 TAX1BP1Q86VP1 789 aa24.98■■□□□ 1.59
KDM3B-201ENST00000314358 TANGO6Q9C0B7 1094 aa24.98■■□□□ 1.59
KDM3B-201ENST00000314358 CUX1P39880 1505 aa24.98■■□□□ 1.59
KDM3B-201ENST00000314358 SIL1Q9H173 461 aa24.98■■□□□ 1.59
KDM3B-201ENST00000314358 NCAPD3P42695 1498 aa24.98■■□□□ 1.59
KDM3B-201ENST00000314358 RBM42Q9BTD8 480 aaKnown RBP24.97■■□□□ 1.59
KDM3B-201ENST00000314358 CCAR1Q8IX12 1150 aaKnown RBP24.97■■□□□ 1.59
KDM3B-201ENST00000314358 MYO6Q9UM54 1294 aa24.96■■□□□ 1.59
KDM3B-201ENST00000314358 STK38Q15208 465 aa24.96■■□□□ 1.59
KDM3B-201ENST00000314358 CDCA7LQ96GN5 454 aa24.96■■□□□ 1.59
KDM3B-201ENST00000314358 PDCL3Q9H2J4 239 aa24.95■■□□□ 1.59
KDM3B-201ENST00000314358 SART3Q15020 963 aaKnown RBP24.95■■□□□ 1.58
KDM3B-201ENST00000314358 PIBF1Q8WXW3 757 aa24.95■■□□□ 1.58
KDM3B-201ENST00000314358 TBC1D2BQ9UPU7 963 aa24.95■■□□□ 1.58
KDM3B-201ENST00000314358 ZNF644Q9H582 1327 aaPredicted RBP24.95■■□□□ 1.58
KDM3B-201ENST00000314358 SEPT11Q9NVA2 429 aaKnown RBP24.95■■□□□ 1.58
KDM3B-201ENST00000314358 SEPT7Q16181 437 aaKnown RBP24.94■■□□□ 1.58
KDM3B-201ENST00000314358 DEF6Q9H4E7 631 aa24.93■■□□□ 1.58
KDM3B-201ENST00000314358 TTC39AQ5SRH9 613 aa24.93■■□□□ 1.58
KDM3B-201ENST00000314358 FGD6Q6ZV73 1430 aa24.93■■□□□ 1.58
KDM3B-201ENST00000314358 TMEM132EQ6IEE7 984 aa24.93■■□□□ 1.58
KDM3B-201ENST00000314358 CLASRPQ8N2M8 674 aaKnown RBP24.92■■□□□ 1.58
KDM3B-201ENST00000314358 NUTM2BA6NNL0 878 aaPredicted RBP24.92■■□□□ 1.58
KDM3B-201ENST00000314358 NUTM2EB1AL46 878 aaPredicted RBP24.92■■□□□ 1.58
KDM3B-201ENST00000314358 WWC2Q6AWC2 1192 aa24.92■■□□□ 1.58
KDM3B-201ENST00000314358 NUTM2AQ8IVF1 878 aaPredicted RBP24.92■■□□□ 1.58
KDM3B-201ENST00000314358 SPINK5Q9NQ38 1064 aaPredicted RBP24.91■■□□□ 1.58
KDM3B-201ENST00000314358 CCDC181Q5TID7 509 aa24.91■■□□□ 1.58
KDM3B-201ENST00000314358 PDZRN3Q9UPQ7 1066 aa24.91■■□□□ 1.58
KDM3B-201ENST00000314358 TXLNAP40222 546 aa24.9■■□□□ 1.58
KDM3B-201ENST00000314358 NUP133Q8WUM0 1156 aa24.9■■□□□ 1.58
KDM3B-201ENST00000314358 STRN4Q9NRL3 753 aa24.9■■□□□ 1.58
KDM3B-201ENST00000314358 CNNM1Q9NRU3 951 aa24.9■■□□□ 1.58
KDM3B-201ENST00000314358 ERICH4A6NGS2 130 aa24.9■■□□□ 1.58
KDM3B-201ENST00000314358 ADAMTS8Q9UP79 889 aa24.89■■□□□ 1.58
KDM3B-201ENST00000314358 ME1P48163 572 aa24.88■■□□□ 1.57
KDM3B-201ENST00000314358 GRIN2BQ13224 1484 aa24.88■■□□□ 1.57
KDM3B-201ENST00000314358 CCDC66A2RUB6 948 aa24.87■■□□□ 1.57
KDM3B-201ENST00000314358 ESCO1Q5FWF5 840 aa24.87■■□□□ 1.57
KDM3B-201ENST00000314358 GOLGA6L10A6NI86 522 aa24.87■■□□□ 1.57
KDM3B-201ENST00000314358 LETM1O95202 739 aaPredicted RBP24.87■■□□□ 1.57
KDM3B-201ENST00000314358 PPFIBP1Q86W92 1011 aa24.86■■□□□ 1.57
KDM3B-201ENST00000314358 TNMDQ9H2S6 317 aa24.86■■□□□ 1.57
KDM3B-201ENST00000314358 ZNHIT6Q9NWK9 470 aaKnown RBP24.86■■□□□ 1.57
KDM3B-201ENST00000314358 NLRP6P59044 892 aa24.86■■□□□ 1.57
KDM3B-201ENST00000314358 TSR2Q969E8 191 aaKnown RBP24.86■■□□□ 1.57
KDM3B-201ENST00000314358 ZNF396Q96N95 335 aaPredicted RBP24.86■■□□□ 1.57
KDM3B-201ENST00000314358 TAF3Q5VWG9 929 aa24.86■■□□□ 1.57
KDM3B-201ENST00000314358 SSBP05455 408 aaKnown RBP eCLIP24.85■■□□□ 1.57
KDM3B-201ENST00000314358 KIF6Q6ZMV9 814 aa24.85■■□□□ 1.57
KDM3B-201ENST00000314358 NOB1Q9ULX3 412 aaKnown RBP24.85■■□□□ 1.57
KDM3B-201ENST00000314358 EXOSC9Q06265 439 aaKnown RBP24.85■■□□□ 1.57
KDM3B-201ENST00000314358 ERLIN2O94905 339 aa24.84■■□□□ 1.57
KDM3B-201ENST00000314358 MTHFSP49914 203 aa24.84■■□□□ 1.57
KDM3B-201ENST00000314358 ARHGAP5Q13017 1502 aa24.84■■□□□ 1.57
KDM3B-201ENST00000314358 LRRFIP2Q9Y608 721 aaKnown RBP24.84■■□□□ 1.57
KDM3B-201ENST00000314358 KIAA0754O94854 1291 aa24.83■■□□□ 1.57
KDM3B-201ENST00000314358 MYL6BP14649 208 aa24.82■■□□□ 1.56
KDM3B-201ENST00000314358 RBM5P52756 815 aaKnown RBP eCLIP24.82■■□□□ 1.56
KDM3B-201ENST00000314358 KIF21BO75037 1637 aa24.82■■□□□ 1.56
KDM3B-201ENST00000314358 UQCRHLA0A096LP55 91 aa24.82■■□□□ 1.56
KDM3B-201ENST00000314358 UQCRHP07919 91 aa24.82■■□□□ 1.56
KDM3B-201ENST00000314358 CCDC30Q5VVM6 783 aa24.82■■□□□ 1.56
KDM3B-201ENST00000314358 PIP4K2BP78356 416 aa24.81■■□□□ 1.56
KDM3B-201ENST00000314358 MATR3P43243 847 aaKnown RBP eCLIP24.81■■□□□ 1.56
KDM3B-201ENST00000314358 ZRSR2Q15696 482 aaKnown RBP24.81■■□□□ 1.56
KDM3B-201ENST00000314358 FYCO1Q9BQS8 1478 aa24.81■■□□□ 1.56
KDM3B-201ENST00000314358 SLC3A2P08195 630 aaKnown RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms