RNA–Protein interactions for RNA: ENST00000313084.9

SEC16A-204, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SEC16A, Length 3,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-204ENST00000313084 NUTM2GQ5VZR2 741 aa12.73□□□□□ -0.37
SEC16A-204ENST00000313084 ZKSCAN2Q63HK3 967 aa12.73□□□□□ -0.37
SEC16A-204ENST00000313084 PMFBP1Q8TBY8 1022 aa12.73□□□□□ -0.37
SEC16A-204ENST00000313084 PDE3AQ14432 1141 aa12.73□□□□□ -0.37
SEC16A-204ENST00000313084 DZIP1LQ8IYY4 767 aaKnown RBP12.73□□□□□ -0.37
SEC16A-204ENST00000313084 WDR63Q8IWG1 891 aa12.72□□□□□ -0.37
SEC16A-204ENST00000313084 ARXQ96QS3 562 aa12.72□□□□□ -0.37
SEC16A-204ENST00000313084 PDZRN3Q9UPQ7 1066 aa12.72□□□□□ -0.37
SEC16A-204ENST00000313084 MYO5BQ9ULV0 1848 aa12.72□□□□□ -0.37
SEC16A-204ENST00000313084 TRIM27P14373 513 aa12.72□□□□□ -0.37
SEC16A-204ENST00000313084 POLKQ9UBT6 870 aa12.72□□□□□ -0.37
SEC16A-204ENST00000313084 KIAA1210Q9ULL0 1709 aa12.72□□□□□ -0.37
SEC16A-204ENST00000313084 IFT172Q9UG01 1749 aa12.71□□□□□ -0.37
SEC16A-204ENST00000313084 ATAD2Q6PL18 1390 aa12.71□□□□□ -0.37
SEC16A-204ENST00000313084 PIK3C2BO00750 1634 aa12.71□□□□□ -0.37
SEC16A-204ENST00000313084 ZBTB7CA1YPR0 619 aa12.71□□□□□ -0.38
SEC16A-204ENST00000313084 C14orf37Q86TY3 774 aa12.71□□□□□ -0.38
SEC16A-204ENST00000313084 NUDT16Q96DE0 195 aaKnown RBP12.71□□□□□ -0.38
SEC16A-204ENST00000313084 METP08581 1390 aa12.71□□□□□ -0.38
SEC16A-204ENST00000313084 CFAP74Q9C0B2 1584 aa12.7□□□□□ -0.38
SEC16A-204ENST00000313084 TMEM57Q8N5G2 664 aa12.7□□□□□ -0.38
SEC16A-204ENST00000313084 ABCC11Q96J66 1382 aa12.7□□□□□ -0.38
SEC16A-204ENST00000313084 RIMS2Q9UQ26 1411 aa12.7□□□□□ -0.38
SEC16A-204ENST00000313084 APBB1O00213 710 aa12.69□□□□□ -0.38
SEC16A-204ENST00000313084 TSPYL6Q8N831 410 aa12.69□□□□□ -0.38
SEC16A-204ENST00000313084 PLEKHF1Q96S99 279 aa12.69□□□□□ -0.38
SEC16A-204ENST00000313084 AEBP1Q8IUX7 1158 aa12.69□□□□□ -0.38
SEC16A-204ENST00000313084 COG3Q96JB2 828 aa12.69□□□□□ -0.38
SEC16A-204ENST00000313084 RTN4Q9NQC3 1192 aaKnown RBP12.69□□□□□ -0.38
SEC16A-204ENST00000313084 SETBP1Q9Y6X0 1596 aa12.69□□□□□ -0.38
SEC16A-204ENST00000313084 WASLO00401 505 aaPredicted RBP12.68□□□□□ -0.38
SEC16A-204ENST00000313084 MVPQ14764 893 aaKnown RBP12.68□□□□□ -0.38
SEC16A-204ENST00000313084 DDRGK1Q96HY6 314 aa12.68□□□□□ -0.38
SEC16A-204ENST00000313084 MFAP1P55081 439 aaKnown RBP12.68□□□□□ -0.38
SEC16A-204ENST00000313084 KRT24Q2M2I5 525 aa12.68□□□□□ -0.38
SEC16A-204ENST00000313084 TRHP20396 242 aaPredicted RBP12.68□□□□□ -0.38
SEC16A-204ENST00000313084 LNPKQ9C0E8 428 aa12.67□□□□□ -0.38
SEC16A-204ENST00000313084 MIS18AQ9NYP9 233 aa12.67□□□□□ -0.38
SEC16A-204ENST00000313084 PTPRMP28827 1452 aa12.67□□□□□ -0.38
SEC16A-204ENST00000313084 RWDD1Q9H446 243 aaPredicted RBP12.67□□□□□ -0.38
SEC16A-204ENST00000313084 ARHGEF28Q8N1W1 1705 aaKnown RBP12.66□□□□□ -0.38
SEC16A-204ENST00000313084 LTV1Q96GA3 475 aaPredicted RBP12.66□□□□□ -0.38
SEC16A-204ENST00000313084 ZMYM3Q14202 1370 aa12.66□□□□□ -0.38
SEC16A-204ENST00000313084 ATF7IPQ6VMQ6 1270 aa12.65□□□□□ -0.38
SEC16A-204ENST00000313084 NGEFQ8N5V2 710 aa12.65□□□□□ -0.38
SEC16A-204ENST00000313084 PPIP5K1Q6PFW1 1433 aa12.65□□□□□ -0.38
SEC16A-204ENST00000313084 SULT6B1Q6IMI4 303 aa12.65□□□□□ -0.38
SEC16A-204ENST00000313084 ZC3H13Q5T200 1668 aaKnown RBP12.65□□□□□ -0.38
SEC16A-204ENST00000313084 RICTORQ6R327 1708 aa12.65□□□□□ -0.38
SEC16A-204ENST00000313084 MCM10Q7L590 875 aa12.65□□□□□ -0.38
SEC16A-204ENST00000313084 PHF23Q9BUL5 403 aaPredicted RBP12.65□□□□□ -0.38
SEC16A-204ENST00000313084 CCDC61Q9Y6R9 512 aa12.64□□□□□ -0.39
SEC16A-204ENST00000313084 ARHGAP31Q2M1Z3 1444 aa12.64□□□□□ -0.39
SEC16A-204ENST00000313084 LTKP29376 864 aa12.64□□□□□ -0.39
SEC16A-204ENST00000313084 NECTIN2Q92692 538 aa12.64□□□□□ -0.39
SEC16A-204ENST00000313084 RSPH6AQ9H0K4 717 aa12.64□□□□□ -0.39
SEC16A-204ENST00000313084 SHPRHQ149N8 1683 aa12.64□□□□□ -0.39
SEC16A-204ENST00000313084 ALKQ9UM73 1620 aa12.64□□□□□ -0.39
SEC16A-204ENST00000313084 NSD2O96028 1365 aa12.63□□□□□ -0.39
SEC16A-204ENST00000313084 MYO3AQ8NEV4 1616 aa12.63□□□□□ -0.39
SEC16A-204ENST00000313084 FRAT2O75474 233 aaPredicted RBP12.63□□□□□ -0.39
SEC16A-204ENST00000313084 NFKBIBQ15653 356 aa12.63□□□□□ -0.39
SEC16A-204ENST00000313084 HSP90AB2PQ58FF8 381 aa12.63□□□□□ -0.39
SEC16A-204ENST00000313084 CD163L1Q9NR16 1453 aa12.63□□□□□ -0.39
SEC16A-204ENST00000313084 CCDC27Q2M243 656 aa12.63□□□□□ -0.39
SEC16A-204ENST00000313084 UPF2Q9HAU5 1272 aaKnown RBP12.63□□□□□ -0.39
SEC16A-204ENST00000313084 PREX1Q8TCU6 1659 aa12.62□□□□□ -0.39
SEC16A-204ENST00000313084 PRR36Q9H6K5 1346 aa12.62□□□□□ -0.39
SEC16A-204ENST00000313084 IQSEC2Q5JU85 1478 aa12.62□□□□□ -0.39
SEC16A-204ENST00000313084 FCHSD2O94868 740 aa12.62□□□□□ -0.39
SEC16A-204ENST00000313084 NGDNQ8NEJ9 315 aaKnown RBP12.62□□□□□ -0.39
SEC16A-204ENST00000313084 MBIPQ9NS73 344 aa12.62□□□□□ -0.39
SEC16A-204ENST00000313084 TMEM131LA2VDJ0 1609 aa12.62□□□□□ -0.39
SEC16A-204ENST00000313084 A2ML1A8K2U0 1454 aa12.62□□□□□ -0.39
SEC16A-204ENST00000313084 C8orf58Q8NAV2 365 aa12.61□□□□□ -0.39
SEC16A-204ENST00000313084 CLTCQ00610 1675 aaKnown RBP12.61□□□□□ -0.39
SEC16A-204ENST00000313084 NEURL4Q96JN8 1562 aa12.61□□□□□ -0.39
SEC16A-204ENST00000313084 RIMBP3CA6NJZ7 1639 aa12.61□□□□□ -0.39
SEC16A-204ENST00000313084 RIMBP3BA6NNM3 1639 aa12.61□□□□□ -0.39
SEC16A-204ENST00000313084 RIMBP3Q9UFD9 1639 aa12.61□□□□□ -0.39
SEC16A-204ENST00000313084 NFE2L2Q16236 605 aa12.6□□□□□ -0.39
SEC16A-204ENST00000313084 ANKRD45Q5TZF3 282 aa12.6□□□□□ -0.39
SEC16A-204ENST00000313084 FOXO3O43524 673 aa12.6□□□□□ -0.39
SEC16A-204ENST00000313084 DDX19BQ9UMR2 479 aa12.6□□□□□ -0.39
SEC16A-204ENST00000313084 ACEP12821 1306 aa12.6□□□□□ -0.39
SEC16A-204ENST00000313084 TWISTNBQ3B726 338 aaPredicted RBP12.6□□□□□ -0.39
SEC16A-204ENST00000313084 PUS7Q96PZ0 661 aaKnown RBP12.59□□□□□ -0.39
SEC16A-204ENST00000313084 PNNQ9H307 717 aaKnown RBP12.59□□□□□ -0.39
SEC16A-204ENST00000313084 FOXD4L1Q9NU39 408 aa12.59□□□□□ -0.39
SEC16A-204ENST00000313084 IPO8O15397 1037 aaKnown RBP12.58□□□□□ -0.39
SEC16A-204ENST00000313084 IL13P35225 146 aa12.58□□□□□ -0.39
SEC16A-204ENST00000313084 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.58□□□□□ -0.39
SEC16A-204ENST00000313084 ROBO2Q9HCK4 1378 aa12.58□□□□□ -0.39
SEC16A-204ENST00000313084 ARHGEF40Q8TER5 1519 aa12.58□□□□□ -0.39
SEC16A-204ENST00000313084 LMOD2Q6P5Q4 547 aa12.58□□□□□ -0.4
SEC16A-204ENST00000313084 SLC4A10Q6U841 1118 aa12.58□□□□□ -0.4
SEC16A-204ENST00000313084 TNRQ92752 1358 aa12.58□□□□□ -0.4
SEC16A-204ENST00000313084 ZNF428Q96B54 188 aa12.58□□□□□ -0.4
SEC16A-204ENST00000313084 HDGFP51858 240 aaKnown RBP12.57□□□□□ -0.4
SEC16A-204ENST00000313084 AMOTL2Q9Y2J4 779 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms