RNA–Protein interactions for RNA: ENST00000311371.9

SOX30-202, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX30, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-202ENST00000311371 SYCE3A1L190 88 aa19.99■□□□□ 0.79
SOX30-202ENST00000311371 HMGN5P82970 282 aaKnown RBP19.99■□□□□ 0.79
SOX30-202ENST00000311371 NEUROD2Q15784 382 aa19.99■□□□□ 0.79
SOX30-202ENST00000311371 TESK2Q96S53 571 aa19.99■□□□□ 0.79
SOX30-202ENST00000311371 LMBRD1Q9NUN5 540 aa19.99■□□□□ 0.79
SOX30-202ENST00000311371 DIP2BQ9P265 1576 aa19.98■□□□□ 0.79
SOX30-202ENST00000311371 COL17A1Q9UMD9 1497 aaPredicted RBP19.98■□□□□ 0.79
SOX30-202ENST00000311371 C17orf53Q8N3J3 647 aaPredicted RBP19.98■□□□□ 0.79
SOX30-202ENST00000311371 CD109Q6YHK3 1445 aa19.98■□□□□ 0.79
SOX30-202ENST00000311371 PRPF40AO75400 957 aaKnown RBP19.98■□□□□ 0.79
SOX30-202ENST00000311371 KCNJ4P48050 445 aa19.98■□□□□ 0.79
SOX30-202ENST00000311371 RGL3Q3MIN7 710 aa19.98■□□□□ 0.79
SOX30-202ENST00000311371 EFCAB2Q5VUJ9 269 aa19.98■□□□□ 0.79
SOX30-202ENST00000311371 TMF1P82094 1093 aa19.97■□□□□ 0.79
SOX30-202ENST00000311371 CHMP4AQ9BY43 222 aa19.97■□□□□ 0.79
SOX30-202ENST00000311371 ARHGEF12Q9NZN5 1544 aa19.97■□□□□ 0.79
SOX30-202ENST00000311371 FANCAO15360 1455 aa19.97■□□□□ 0.79
SOX30-202ENST00000311371 IRX5P78411 483 aaPredicted RBP19.97■□□□□ 0.79
SOX30-202ENST00000311371 FTSJ3Q8IY81 847 aaKnown RBP19.97■□□□□ 0.79
SOX30-202ENST00000311371 KIF2CQ99661 725 aa19.97■□□□□ 0.79
SOX30-202ENST00000311371 ARAP3Q8WWN8 1544 aa19.97■□□□□ 0.79
SOX30-202ENST00000311371 TSPOAP1O95153 1857 aa19.96■□□□□ 0.79
SOX30-202ENST00000311371 AK9Q5TCS8 1911 aa19.96■□□□□ 0.79
SOX30-202ENST00000311371 CLEC17AQ6ZS10 378 aa19.96■□□□□ 0.79
SOX30-202ENST00000311371 MAP3K4Q9Y6R4 1608 aa19.96■□□□□ 0.79
SOX30-202ENST00000311371 GTF2F1P35269 517 aaKnown RBP eCLIP19.96■□□□□ 0.79
SOX30-202ENST00000311371 KIF13AQ9H1H9 1805 aa19.95■□□□□ 0.78
SOX30-202ENST00000311371 ABCC1P33527 1531 aa19.95■□□□□ 0.78
SOX30-202ENST00000311371 FAM69CQ0P6D2 419 aa19.95■□□□□ 0.78
SOX30-202ENST00000311371 GPT2Q8TD30 523 aa19.95■□□□□ 0.78
SOX30-202ENST00000311371 NOLC1Q14978 699 aaKnown RBP eCLIP19.94■□□□□ 0.78
SOX30-202ENST00000311371 NUP155O75694 1391 aa19.94■□□□□ 0.78
SOX30-202ENST00000311371 ERBINQ96RT1 1412 aa19.94■□□□□ 0.78
SOX30-202ENST00000311371 ARHGEF5Q12774 1597 aa19.94■□□□□ 0.78
SOX30-202ENST00000311371 LRSAM1Q6UWE0 723 aa19.94■□□□□ 0.78
SOX30-202ENST00000311371 RSPH4AQ5TD94 716 aa19.93■□□□□ 0.78
SOX30-202ENST00000311371 WWC1Q8IX03 1113 aa19.93■□□□□ 0.78
SOX30-202ENST00000311371 GLI2P10070 1586 aa19.93■□□□□ 0.78
SOX30-202ENST00000311371 ADGBQ8N7X0 1667 aa19.93■□□□□ 0.78
SOX30-202ENST00000311371 PKP1Q13835 747 aa19.92■□□□□ 0.78
SOX30-202ENST00000311371 FAM135AQ9P2D6 1515 aa19.92■□□□□ 0.78
SOX30-202ENST00000311371 TMEM63CQ9P1W3 806 aa19.92■□□□□ 0.78
SOX30-202ENST00000311371 RRP7AQ9Y3A4 280 aaKnown RBP19.92■□□□□ 0.78
SOX30-202ENST00000311371 CHAMP1Q96JM3 812 aa19.91■□□□□ 0.78
SOX30-202ENST00000311371 MVPQ14764 893 aaKnown RBP19.91■□□□□ 0.78
SOX30-202ENST00000311371 CCDC141Q6ZP82 1450 aa19.91■□□□□ 0.78
SOX30-202ENST00000311371 PIBF1Q8WXW3 757 aa19.89■□□□□ 0.78
SOX30-202ENST00000311371 NSFL1CQ9UNZ2 370 aaKnown RBP19.89■□□□□ 0.77
SOX30-202ENST00000311371 TRAPPC8Q9Y2L5 1435 aa19.89■□□□□ 0.77
SOX30-202ENST00000311371 KIF16BQ96L93 1317 aa19.89■□□□□ 0.77
SOX30-202ENST00000311371 C9orf84Q5VXU9 1444 aa19.89■□□□□ 0.77
SOX30-202ENST00000311371 TTC12Q9H892 705 aaPredicted RBP19.89■□□□□ 0.77
SOX30-202ENST00000311371 MAGI2Q86UL8 1455 aa19.88■□□□□ 0.77
SOX30-202ENST00000311371 CERS3Q8IU89 383 aa19.88■□□□□ 0.77
SOX30-202ENST00000311371 LNPKQ9C0E8 428 aa19.88■□□□□ 0.77
SOX30-202ENST00000311371 ADGRL1O94910 1474 aa19.88■□□□□ 0.77
SOX30-202ENST00000311371 NUCB2P80303 420 aa19.87■□□□□ 0.77
SOX30-202ENST00000311371 PPRC1Q5VV67 1664 aaKnown RBP19.87■□□□□ 0.77
SOX30-202ENST00000311371 PRAG1Q86YV5 1406 aa19.86■□□□□ 0.77
SOX30-202ENST00000311371 TSPY4P0CV99 314 aa19.86■□□□□ 0.77
SOX30-202ENST00000311371 TSPY10P0CW01 314 aa19.86■□□□□ 0.77
SOX30-202ENST00000311371 SHANK2Q9UPX8 1470 aa19.86■□□□□ 0.77
SOX30-202ENST00000311371 CFAP74Q9C0B2 1584 aa19.86■□□□□ 0.77
SOX30-202ENST00000311371 AFAP1Q8N556 730 aa19.85■□□□□ 0.77
SOX30-202ENST00000311371 FOXD4L5Q5VV16 416 aaPredicted RBP19.85■□□□□ 0.77
SOX30-202ENST00000311371 FOXD4L4Q8WXT5 416 aaPredicted RBP19.85■□□□□ 0.77
SOX30-202ENST00000311371 ZFP91Q96JP5 570 aaPredicted RBP19.85■□□□□ 0.77
SOX30-202ENST00000311371 RIOK3O14730 519 aaKnown RBP19.84■□□□□ 0.77
SOX30-202ENST00000311371 DZIP1LQ8IYY4 767 aaKnown RBP19.84■□□□□ 0.77
SOX30-202ENST00000311371 ADGRL2O95490 1459 aa19.84■□□□□ 0.77
SOX30-202ENST00000311371 OGFRQ9NZT2 677 aa19.83■□□□□ 0.77
SOX30-202ENST00000311371 ITPRIPQ8IWB1 547 aa19.82■□□□□ 0.76
SOX30-202ENST00000311371 FKBP5Q13451 457 aaPredicted RBP19.82■□□□□ 0.76
SOX30-202ENST00000311371 ANKRD50Q9ULJ7 1429 aa19.82■□□□□ 0.76
SOX30-202ENST00000311371 TRPM1Q7Z4N2 1603 aa19.82■□□□□ 0.76
SOX30-202ENST00000311371 HDAC1Q13547 482 aaPredicted RBP19.82■□□□□ 0.76
SOX30-202ENST00000311371 AEBP1Q8IUX7 1158 aa19.82■□□□□ 0.76
SOX30-202ENST00000311371 ANKRD7Q92527 254 aa19.82■□□□□ 0.76
SOX30-202ENST00000311371 DNAJC2Q99543 621 aaKnown RBP19.82■□□□□ 0.76
SOX30-202ENST00000311371 FEZ1Q99689 392 aa19.82■□□□□ 0.76
SOX30-202ENST00000311371 TSPY26PQ9H489 355 aa19.82■□□□□ 0.76
SOX30-202ENST00000311371 PIK3C2GO75747 1445 aa19.81■□□□□ 0.76
SOX30-202ENST00000311371 ARHGAP31Q2M1Z3 1444 aa19.81■□□□□ 0.76
SOX30-202ENST00000311371 PLXNC1O60486 1568 aa19.81■□□□□ 0.76
SOX30-202ENST00000311371 ZKSCAN2Q63HK3 967 aa19.81■□□□□ 0.76
SOX30-202ENST00000311371 MAST1Q9Y2H9 1570 aa19.81■□□□□ 0.76
SOX30-202ENST00000311371 IRX3P78415 501 aaPredicted RBP19.8■□□□□ 0.76
SOX30-202ENST00000311371 CHAF1AQ13111 956 aaPredicted RBP19.8■□□□□ 0.76
SOX30-202ENST00000311371 CYP2E1P05181 493 aaPredicted RBP19.8■□□□□ 0.76
SOX30-202ENST00000311371 SLFN14P0C7P3 912 aa19.8■□□□□ 0.76
SOX30-202ENST00000311371 NEO1Q92859 1461 aa19.79■□□□□ 0.76
SOX30-202ENST00000311371 GABPB1Q06547 395 aaPredicted RBP19.79■□□□□ 0.76
SOX30-202ENST00000311371 TBC1D9Q6ZT07 1266 aa19.79■□□□□ 0.76
SOX30-202ENST00000311371 TIGD1Q96MW7 591 aa19.79■□□□□ 0.76
SOX30-202ENST00000311371 USP25Q9UHP3 1055 aa19.79■□□□□ 0.76
SOX30-202ENST00000311371 CCDC66A2RUB6 948 aa19.78■□□□□ 0.76
SOX30-202ENST00000311371 ERICH4A6NGS2 130 aa19.78■□□□□ 0.76
SOX30-202ENST00000311371 KDM5DQ9BY66 1539 aa19.78■□□□□ 0.76
SOX30-202ENST00000311371 ZGPATQ8N5A5 531 aaKnown RBP19.78■□□□□ 0.76
SOX30-202ENST00000311371 TRERF1Q96PN7 1200 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms